Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001748-TA|BGIBMGA001748-PA|IPR007205|Protein of unknown
function DUF383, IPR007206|Protein of unknown function DUF384
(361 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21786| Best HMM Match : DUF383 (HMM E-Value=0) 200 2e-51
SB_32431| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14) 31 1.9
SB_4028| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_48611| Best HMM Match : SKI (HMM E-Value=0.00037) 29 5.9
SB_12877| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_52361| Best HMM Match : EutS (HMM E-Value=1) 29 5.9
>SB_21786| Best HMM Match : DUF383 (HMM E-Value=0)
Length = 335
Score = 200 bits (487), Expect = 2e-51
Identities = 115/324 (35%), Positives = 180/324 (55%), Gaps = 10/324 (3%)
Query: 8 ELIEFLKPESRIDLRHISMDYLVSLSGTEDGVNKMLEHERITQAVIELTDDRIKEIAKHA 67
EL+ FLK R D+R+ ++DY++ L+ TE G + +E + +LT D ++I+ A
Sbjct: 12 ELLGFLKQSERGDVRYFALDYILGLTVTESGQQFLKNNEEFLSQLYKLTRDSNEKISSDA 71
Query: 68 LLMLVNISAYTRGATELLKYKPLRYKNIIDLLISYVLNPNKTDADAACMTLSNITRLEDE 127
L+N+SA A +LLK+K II L+ Y+LN N AD + LSN+TR E
Sbjct: 72 YSALINLSAVPALAEKLLKFK------IIIPLVDYLLNENSIHADKCAVVLSNLTRTEST 125
Query: 128 LEVCLNTFIPHLNDIMNAFVNTEFNKT---GSNLHYLAPMFSNLACSHRIRKWLCEENPH 184
E+ LN + D + V + S+ LA SNL + R+ + +
Sbjct: 126 CEIALNELLAASPDYVYRVVERFCESSLVSDSSPDSLALFISNLTQMKKGRELMLDRKRC 185
Query: 185 VPLIKLIPFCNYDVSNIRKGGAIGTIRNISFDTDYHEFLVSPDLDLLTYILYPLMGNEDY 244
V + +L+PF + S R+GG + ++N F+TD H++L++ ++D+L ++L PL G E+
Sbjct: 186 V-IQRLLPFTQHKSSLNRRGGVVTILKNCCFETDTHDWLLNDEVDILPHLLLPLAGGEEL 244
Query: 245 PDDEMEPLPVTLQYLPKEKRREPDIDIRILILETLNKLCAQRRGRPYLRENGVYYIMREY 304
++E + LP LQYL + K RE D DIR ++LE+L +L A + GR +R+ VY I+RE
Sbjct: 245 TEEETDKLPPDLQYLDESKERETDPDIRNMLLESLLQLLATKNGRTIMRDKNVYVILREL 304
Query: 305 HKWEKDPKALIACENVVDILIQKE 328
H WEKD A C + ILI +E
Sbjct: 305 HNWEKDEIAQATCLKCIHILIGEE 328
>SB_32431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 30.7 bits (66), Expect = 1.9
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 119 SNITRLEDELEVCLNTFIPHLNDIMNAFVNTEFNKTGSNLHYLAPMFSNLA--CSHRIRK 176
S I +L+ +++ T H D+ A +FN TG +L + +F+NLA H+
Sbjct: 173 SQIKQLKSQVQKAKATIKKHEKDLEVA--QAKFNATGFSLTRVNEVFNNLAKLSLHQSTP 230
Query: 177 WLCEENPHV-----PLIKLIPFCNYDVSNIRKGGAIGTIRNISFDTDYHEF 222
L + P V I + F Y N KG A ++RN +D Y+ F
Sbjct: 231 TLIQALPMVLPRDTKAIIVSVFFFYKRGNQDKGKA--SLRNTHYDVHYNTF 279
>SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14)
Length = 468
Score = 30.7 bits (66), Expect = 1.9
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 241 NEDYPDDEMEPLPVTLQYLPK---EKRREPDIDIRILILETLNKLCAQRRGRPYLRENGV 297
N++ D + EP+ VT + + EKRR +++ I L + +CA R + L + V
Sbjct: 122 NQEEKDVKEEPVKVTRRRTTRNESEKRRRDKLNVYITELAAMVPMCASSRKK--LDKTTV 179
Query: 298 YYIMREYHKWEKD-PKALIACENVVDILIQKEDEVG 332
+ Y K D +++A E V DEVG
Sbjct: 180 LQMAVNYMKIHNDLTTSVLAKEPAVQSSFLSGDEVG 215
>SB_4028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 6 FDEL--IEFLKPESRIDLRHISMDYLVSLSGTEDGVNKMLEHERITQAVIELTDDRIKEI 63
FDEL + L+PE + + + ++ V+K+ E ++I IE+ D KE+
Sbjct: 10 FDELNKVRVLEPEINTQTQELKEE-------CKEFVDKIAEFQKIVGGFIEMVDGLAKEV 62
Query: 64 AKHALLMLVN 73
K + ML++
Sbjct: 63 EKEKMKMLIS 72
>SB_48611| Best HMM Match : SKI (HMM E-Value=0.00037)
Length = 926
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 177 WLCEENPHVPLIKL---IPFCNYDVSNIRKGGAIGTIRNISFDTDYHEFLVSPDL 228
W+ +NPHVP L F + + S GG IG N + + Y FL++P+L
Sbjct: 64 WVVNKNPHVPFCSLGADNAFEHVNRSMKVSGGLIGITLNQNARSKY--FLIAPEL 116
>SB_12877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 96 IDLLISYVLNPNKTDADAACMTLSNITRLEDELEVCLNTFIPHLNDIMNAFVNTEFNKTG 155
+ + + Y+ + ADA TLS++ + F PH D+++ N +F+ +G
Sbjct: 101 LSISLQYIAS-EANPADAPSRTLSDLDTMLSPQASVETAFGPHTVDLISLPENAKFDLSG 159
Query: 156 SNLHYLAP 163
L + +P
Sbjct: 160 RRLWFFSP 167
>SB_52361| Best HMM Match : EutS (HMM E-Value=1)
Length = 682
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 177 WLCEENPHVPLIKL---IPFCNYDVSNIRKGGAIGTIRNISFDTDYHEFLVSPDL 228
W+ +NPHVP L F + + S GG IG N + + Y FL++P+L
Sbjct: 565 WVVNKNPHVPFCSLGADNAFEHVNRSMKVSGGLIGITLNQNARSKY--FLIAPEL 617
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.139 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,513,418
Number of Sequences: 59808
Number of extensions: 541678
Number of successful extensions: 1080
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1074
Number of HSP's gapped (non-prelim): 8
length of query: 361
length of database: 16,821,457
effective HSP length: 83
effective length of query: 278
effective length of database: 11,857,393
effective search space: 3296355254
effective search space used: 3296355254
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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