Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001748-TA|BGIBMGA001748-PA|IPR007205|Protein of unknown
function DUF383, IPR007206|Protein of unknown function DUF384
(361 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g14300.1 68414.m01695 expressed protein contains Pfam PF04063... 87 1e-17
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 35 0.073
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 33 0.30
At5g47540.1 68418.m05869 Mo25 family protein similar to MO25 pro... 32 0.68
At3g43920.1 68416.m04701 ribonuclease III family protein similar... 31 1.2
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 30 2.1
At3g06490.1 68416.m00753 myb family transcription factor (MYB108... 30 2.1
At1g50240.1 68414.m05633 armadillo/beta-catenin repeat family pr... 30 2.1
At4g28010.1 68417.m04018 pentatricopeptide (PPR) repeat-containi... 30 2.8
At4g28580.1 68417.m04088 magnesium transporter CorA-like family ... 29 4.8
At1g23870.1 68414.m03011 glycosyl transferase family 20 protein ... 29 4.8
At3g59000.1 68416.m06576 F-box family protein contains F-box dom... 29 6.4
At2g47240.1 68415.m05899 long-chain-fatty-acid--CoA ligase famil... 29 6.4
At1g70290.1 68414.m08087 trehalose-6-phosphate synthase, putativ... 29 6.4
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 28 8.4
At4g17770.1 68417.m02652 glycosyl transferase family 20 protein ... 28 8.4
At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2) sim... 28 8.4
At3g21190.1 68416.m02678 expressed protein contains Pfam PF03138... 28 8.4
At2g02690.1 68415.m00208 hypothetical protein 28 8.4
>At1g14300.1 68414.m01695 expressed protein contains Pfam PF04063:
Domain of unknown function (DUF383) and PF04064: Domain
of unknown function (DUF384)
Length = 339
Score = 87.4 bits (207), Expect = 1e-17
Identities = 80/331 (24%), Positives = 154/331 (46%), Gaps = 22/331 (6%)
Query: 7 DELIEFLKPESRIDLRHISMDYLVSLSGTEDGVNKMLEHERITQAVIELTDDRIKEIAKH 66
+EL+EFL S ++ +++ + L+G+E+G+ + ++ I + + KE+++
Sbjct: 6 EELVEFLSSPSP-PVKKAAVEIVSGLTGSEEGLQSLSKYSEILLPSLSQLLNESKEVSEP 64
Query: 67 ALLMLVNISAYTRGATELLKYKPLRYKNIIDLLISYVLNPNKTDADAACMTLSNITRLED 126
A LVN+S A ++++ +I + + + P M L N+T+L+D
Sbjct: 65 AAQALVNLSQKCELAKKMIQ------MGLIKVAMDMLYKPESCITRLLVMLLVNLTQLDD 118
Query: 127 ELEVCLNTFIP-----HLNDIMNAFVNTEFNKTGSNLHYLAPMFSNLACSHRIRKWLCEE 181
+ L H+ ++ +F + ++ + N++ + RK L E
Sbjct: 119 GVSSLLQIDDEKMHGLHIMKLVRSFCRSSGETADDQFEHVGSILVNISKTEDGRKLLLE- 177
Query: 182 NPHVPLIKLIPFCNYDVSN-IRKGGAIGTIRNISFD--TDYHEFLVSPDLDLLTYILYPL 238
P L+K I +D +N +RK G GTIRN F+ L+ + L +L P+
Sbjct: 178 -PKRRLLKQI-IRQFDSTNQLRKKGVAGTIRNCCFEAKNQLQNILLISEF-LWPALLLPV 234
Query: 239 MGNEDYPDDEMEPLPVTL-QYLPKEKRREPDIDIRILILETLNKLCAQRRG-RPYLRENG 296
G++ Y + ++ +P L L E+ D DIR+ LE + + + G R + NG
Sbjct: 235 AGSKTYSEQDVAKMPPELGSALSIEREPVTDPDIRVQTLEAIYLIILEEAGRRAFWSVNG 294
Query: 297 VYYIMREYHKWEKDPKALIACENVVDILIQK 327
+ Y ++E+DPKA+ A E V +L+++
Sbjct: 295 PRILQLGY-EYEEDPKAMRAYEQVGSLLVEE 324
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 35.1 bits (77), Expect = 0.073
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 132 LNTFIPHLNDIMNAFVNTEFNK--TGSNLHYLAPMFSNLACSHRIRKWLCEENPHVPLIK 189
+ T++ H ++ + NK +G N + + +LA S + R+WL H ++
Sbjct: 245 VETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVR 304
Query: 190 LIPFCNYDVSNIRKGGAIG 208
+ +C + S + GG +G
Sbjct: 305 ALAWCPFQASLLATGGGVG 323
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 132 LNTFIPHLNDIMNAFVNTEFNK--TGSNLHYLAPMFSNLACSHRIRKWLCEENPHVPLIK 189
+ T++ H ++ + K +G N + + +LA S+ R+WL H ++
Sbjct: 229 IGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVR 288
Query: 190 LIPFCNYDVSNIRKGGAIG 208
+ +C + S + GG +G
Sbjct: 289 ALAWCPFQASLLATGGGVG 307
>At5g47540.1 68418.m05869 Mo25 family protein similar to MO25
protein (early mouse development protein family) [Mouse]
SWISS-PROT:Q06138
Length = 344
Score = 31.9 bits (69), Expect = 0.68
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 93 KNIIDLLISYVLNPNKTDADAACMTLSNITRLEDELEVCLNTFIPHLNDIMNAFVNTEFN 152
++ + LLI+ + N A ++N+ R + + + ++ D+M+ + +F
Sbjct: 81 EDTLRLLITCLPKLNLETRKDATQVVANLQRQQVNSRLIASDYLEANIDLMDVLIEGDFE 140
Query: 153 KTGSNLHYLAPMFSNLACSHRIRKWLCEENPHVPLIKLIPFCNYDVS 199
T LHY A MF + K++ E + I N+D++
Sbjct: 141 NTDMALHYGA-MFRECIRHQIVAKYVLESDHVKKFFDYIQLPNFDIA 186
>At3g43920.1 68416.m04701 ribonuclease III family protein similar to
RNA helicase/RNAseIII CAF protein [Arabidopsis thaliana]
GI:6102610; contains Pfam profiles PF02170: PAZ domain,
PF00636: RNase3 domain
Length = 1531
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 167 NLACSHRIRKWLCEENPHVPLIKLIPFCNYDVSNIRKGGAIGTI 210
NLAC+H R+ L E + I +IPF N++KGG GT+
Sbjct: 1402 NLACNHSDRETLTSETTEIQSI-VIPFIG--PINMKKGGPRGTL 1442
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 167 NLACSHRIRKWLCEENPHVPLIKLIPFCNYDVSNIRKGGAIG 208
++A S+ R+WL H ++ + +C + S + GG +G
Sbjct: 249 SVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVG 290
>At3g06490.1 68416.m00753 myb family transcription factor (MYB108)
identical to transcription factor MYB108 GI:15375290
from [Arabidopsis thaliana]
Length = 323
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 14/78 (17%)
Query: 193 FCNYDVSNIRKGGAIGTIRNISFDT-DYHEFLVSPDLDLLTYILYP---------LMGNE 242
F NYD +N G G + N + T + VSP DL Y P MGN
Sbjct: 186 FMNYDYNNNNMGQQFGVMSNNDYITPENSSVAVSPASDLTEYYSAPNPNPEYYSGQMGNS 245
Query: 243 DYPDDEMEPLPVTLQYLP 260
YPD + V+ Q LP
Sbjct: 246 YYPDQNL----VSSQLLP 259
>At1g50240.1 68414.m05633 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 1021
Score = 30.3 bits (65), Expect = 2.1
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 87 YKPLRYKNIIDLLISYVLNPNKTDADAACMTLSNITRLEDELEVCLNTFIPHLNDIMNAF 146
Y L II LLI +P+K AC + N D L L I L N
Sbjct: 845 YSALAEHQIIGLLIDRCADPDKRTQKFACFAIGNAAYHNDTLYEELRRSITQL---ANVL 901
Query: 147 VNTEFNKTGSNLHYLAPMFSNLA-CSHRIRKWLCEENPHVPLIKLIPFCN 195
E +KT +N A SNL S+++ + + + L++L+ C+
Sbjct: 902 TTAEEDKTKAN---AAGALSNLVRNSNKLCEDIVSKGALQTLLRLVADCS 948
>At4g28010.1 68417.m04018 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 704
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 212 NISFDTDYHEFLVSPDLDLLTYILYPLMGNEDYPDDEMEPLPVTLQYLPKEKRREPDIDI 271
NI+++ DLD + +LY ++ + Y D ++ + L KE R +DI
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 272 RILILETL 279
L++E L
Sbjct: 447 YDLLVEKL 454
>At4g28580.1 68417.m04088 magnesium transporter CorA-like family
protein (MRS2-6) weak similarity to SP|Q01926 RNA
splicing protein MRS2, mitochondrial precursor
{Saccharomyces cerevisiae}; contains Pfam profile
PF01544: CorA-like Mg2+ transporter protein
Length = 408
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 20 DLRHISMDYLVSLSGTEDGVNKMLEHERITQAVIELTDDRIKEIAKHALLMLVNISAY 77
D+ + Y + L G + + M EH T+A +++ + + H L+MLVNI Y
Sbjct: 296 DMEMLLEAYFMQLEGMRNKILLMKEHIDSTEAYVKILQNSRRNGLIH-LMMLVNIGNY 352
>At1g23870.1 68414.m03011 glycosyl transferase family 20 protein /
trehalose-phosphatase family protein contains Pfam
profile: PF02358 trehalose-phosphatase
Length = 867
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 315 IACENVVDILIQKEDEVGAEDLSTVEVPEELRERFNKTNSDFMMN 359
I + V++++ +ED V D + +P LR+RFN+ F ++
Sbjct: 186 IFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLH 230
>At3g59000.1 68416.m06576 F-box family protein contains F-box domain
Pfam:PF00646
Length = 491
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 209 TIRNISFDTDYHEFLVSPDLDLLTYILYPLMGNEDYPDDEMEPL 252
+++ ++ D+D H S D L Y Y EDYP +ME L
Sbjct: 210 SLKTLTIDSDGHLGTFSFDTPSLVYFCYSDYAAEDYPVVKMENL 253
>At2g47240.1 68415.m05899 long-chain-fatty-acid--CoA ligase family
protein / long-chain acyl-CoA synthetase family protein
similar to GI:1617270 (MF7P) and gi:1617628 (MF45P) from
[Brassica napus] ; contains Pfam AMP-binding enzyme
domain PF00501
Length = 660
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 306 KWEKDPKALIACENVVDILIQKEDEVGAEDLSTVEVPEELRERFNKTNSDFMMNL 360
K K KA+++ NV D L K E+G + S ++ RE+ TN N+
Sbjct: 168 KCAKRLKAIVSFTNVSDELSHKASEIGVKTYSWIDFLHMGREKPEDTNPPKAFNI 222
>At1g70290.1 68414.m08087 trehalose-6-phosphate synthase, putative
similar to Alpha,alpha-trehalose-phosphate synthase
[UDP-forming] (EC 2.4.1.15) (Trehalose-6-phosphate
synthase) from {Kluyveromyces lactis} SP|Q07158,
{Saccharomyces cerevisiae} SP|Q00764; contains Pfam
profiles PF00982: Glycosyltransferase family 20,
PF02358: Trehalose-phosphatase
Length = 856
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 315 IACENVVDILIQKEDEVGAEDLSTVEVPEELRERFNKTNSDFMMN 359
I + V++++ ++D V +D + +P LR+RFN+ F ++
Sbjct: 184 IFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLH 228
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 167 NLACSHRIRKWLCEENPHVPLIKLIPFCNYDVSNIRKGGAIG 208
++A S R+WL H ++ + +C + + + GG +G
Sbjct: 280 SVASSKPTRQWLHRFEEHTAAVRALAWCPFQATLLATGGGVG 321
>At4g17770.1 68417.m02652 glycosyl transferase family 20 protein /
trehalose-phosphatase family protein contains Pfam
profile: PF02358 trehalose-phosphatase
Length = 862
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 315 IACENVVDILIQKEDEVGAEDLSTVEVPEELRERFNKTNSDFMMN 359
I + V++++ +D V D + +P LR+RFN+ F ++
Sbjct: 186 IFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLH 230
>At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2)
similar to importin alpha 2 [Capsicum annuum]
GI:13752562; contains Pfam profiles PF01749: Importin
beta binding domain, PF00514:
Armadillo/beta-catenin-like repeat; non-consensus GG
donor splice site at exon 1 and 6; CT acceptor splice
site at exon 2
Length = 444
Score = 28.3 bits (60), Expect = 8.4
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 2 ALDSFDELIEFLKPESRIDLRHISMDYLVSLSGTEDGVNKMLEHERITQAVIELTDDRIK 61
AL + + LI E D ++ YL GT D + ++E + ++EL +
Sbjct: 248 ALPALERLIHSTDEEVLTDACW-ALSYLSD--GTNDKIQSVIE-AGVVPRLVELLQHQSP 303
Query: 62 EIAKHALLMLVNISAYTRGATELLKYKPLRYKNIIDLLISYVLNPNKTDADAACMTLSNI 121
+ AL + NI T+ + + + ++ LL N K+ AC T+SNI
Sbjct: 304 SVLIPALRSIGNIVTGDDLQTQCV----ISHGALLSLLSLLTHNHKKSIKKEACWTISNI 359
Query: 122 TR-LEDELE-VC-LNTFIPHLNDIMNA 145
T D+++ VC P +N + NA
Sbjct: 360 TAGNRDQIQAVCEAGLICPLVNLLQNA 386
>At3g21190.1 68416.m02678 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown;
Length = 422
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 312 KALIACENVVDILIQKEDEVGAEDLSTVEVPEELRERFNKTNSD 355
K + + ENVV ++ + +EV +++ V+VP + E + K + D
Sbjct: 147 KLIKSLENVVKVVKKLPEEVSLRNMAIVKVPTRVTEDYIKEHID 190
>At2g02690.1 68415.m00208 hypothetical protein
Length = 623
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 303 EYHKWEKDPKALIACENVVDILIQKEDEVGAEDLSTVEVPEELRERFNKTNS 354
E+HK E D K + NV+ Q + + +T++ P L+ NKTNS
Sbjct: 6 EFHKGEIDGKPYLLYHNVMKPSTQTHTSNSSAEKTTIQKPLSLQ---NKTNS 54
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.139 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,989,016
Number of Sequences: 28952
Number of extensions: 405941
Number of successful extensions: 1002
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 988
Number of HSP's gapped (non-prelim): 20
length of query: 361
length of database: 12,070,560
effective HSP length: 82
effective length of query: 279
effective length of database: 9,696,496
effective search space: 2705322384
effective search space used: 2705322384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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