GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001747-TA|BGIBMGA001747-PA|undefined
         (227 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   3.2  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   4.3  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   7.4  
DQ396550-1|ABD60145.1|  113|Anopheles gambiae adipokinetic hormo...    23   9.8  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 112 SECAGISGSSCVRTPYDSAT--RCLCGDNSPPVNGQCEAQT 150
           +ECA I GS C    +   T   C C D+    N +C   T
Sbjct: 560 NECATIDGSICGGPDHGICTCGTCSCFDSWSGDNCECTTDT 600


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 110 HQSECAGISGSSCVRTPYDSATRC 133
           H++  AG++  S VR  YD    C
Sbjct: 700 HKNHLAGVTAPSLVRHAYDVQQNC 723


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 204 DHACSASICIKTMEARGKENRLC 226
           D   +A++CI   + R K N LC
Sbjct: 158 DEYSNAAVCIDPADGRLKRNLLC 180


>DQ396550-1|ABD60145.1|  113|Anopheles gambiae adipokinetic hormone
           II protein.
          Length = 113

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 141 PVNGQCEAQTKSLYHV 156
           PVN  C A TK++ H+
Sbjct: 63  PVNNLCAAVTKNIQHL 78


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.133    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,334
Number of Sequences: 2123
Number of extensions: 8392
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 4
length of query: 227
length of database: 516,269
effective HSP length: 62
effective length of query: 165
effective length of database: 384,643
effective search space: 63466095
effective search space used: 63466095
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)