BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001747-TA|BGIBMGA001747-PA|undefined
(227 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC074973-1|AAH74973.1| 288|Homo sapiens sprouty homolog 3 (Dros... 33 1.1
BC074972-1|AAH74972.1| 288|Homo sapiens sprouty homolog 3 (Dros... 33 1.1
BC069609-1|AAH69609.1| 288|Homo sapiens sprouty homolog 3 (Dros... 33 1.1
AJ271735-1|CAB96768.1| 288|Homo sapiens sprouty (Drosophila) ho... 33 1.1
DQ217942-1|ABB70739.1| 886|Homo sapiens EGF-like module contain... 31 4.4
BC059395-1|AAH59395.1| 821|Homo sapiens EMR1 protein protein. 31 4.4
AK131562-1|BAD18695.1| 867|Homo sapiens protein ( Homo sapiens ... 31 4.4
AB065918-1|BAC06133.1| 929|Homo sapiens seven transmembrane hel... 31 4.4
>BC074973-1|AAH74973.1| 288|Homo sapiens sprouty homolog 3
(Drosophila) protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 132 RCLCGDNSPPVNGQCEAQTKSLYHVCATSDE--CGDE-LICG 170
RCLC S G C K L++ C+T DE C DE CG
Sbjct: 173 RCLCSAESLLDYGTCLCCVKGLFYHCSTDDEDNCADEPCSCG 214
>BC074972-1|AAH74972.1| 288|Homo sapiens sprouty homolog 3
(Drosophila) protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 132 RCLCGDNSPPVNGQCEAQTKSLYHVCATSDE--CGDE-LICG 170
RCLC S G C K L++ C+T DE C DE CG
Sbjct: 173 RCLCSAESLLDYGTCLCCVKGLFYHCSTDDEDNCADEPCSCG 214
>BC069609-1|AAH69609.1| 288|Homo sapiens sprouty homolog 3
(Drosophila) protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 132 RCLCGDNSPPVNGQCEAQTKSLYHVCATSDE--CGDE-LICG 170
RCLC S G C K L++ C+T DE C DE CG
Sbjct: 173 RCLCSAESLLDYGTCLCCVKGLFYHCSTDDEDNCADEPCSCG 214
>AJ271735-1|CAB96768.1| 288|Homo sapiens sprouty (Drosophila)
homolog 3 protein.
Length = 288
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 132 RCLCGDNSPPVNGQCEAQTKSLYHVCATSDE--CGDE-LICG 170
RCLC S G C K L++ C+T DE C DE CG
Sbjct: 173 RCLCSAESLLDYGTCLCCVKGLFYHCSTDDEDNCADEPCSCG 214
>DQ217942-1|ABB70739.1| 886|Homo sapiens EGF-like module containing
mucin-like hormone receptor-like 1 protein.
Length = 886
Score = 30.7 bits (66), Expect = 4.4
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 107 SCSHQSECAGIS--GSSCVRTPYDSATRCLCGDNSPPVNGQCEAQTKSLYHVCATSDEC- 163
SC EC + S+C TP + C C P NGQ + + C DEC
Sbjct: 218 SCEDIDECTEMCPINSTCTNTP--GSYFCTCHPGFAPSNGQLNFTDQGV--ECRDIDECR 273
Query: 164 GDELICGVPNITSTA 178
D CG +I + A
Sbjct: 274 QDPSTCGPNSICTNA 288
>BC059395-1|AAH59395.1| 821|Homo sapiens EMR1 protein protein.
Length = 821
Score = 30.7 bits (66), Expect = 4.4
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 107 SCSHQSECAGIS--GSSCVRTPYDSATRCLCGDNSPPVNGQCEAQTKSLYHVCATSDEC- 163
SC EC + S+C TP + C C P NGQ + + C DEC
Sbjct: 218 SCEDIDECTEMCPINSTCTNTP--GSYFCTCHPGFAPSNGQLNFTDQGV--ECRDIDECR 273
Query: 164 GDELICGVPNITSTA 178
D CG +I + A
Sbjct: 274 QDPSTCGPNSICTNA 288
>AK131562-1|BAD18695.1| 867|Homo sapiens protein ( Homo sapiens
cDNA FLJ16811 fis, clone THYMU3024602, highly similar
to Cell surface glycoprotein EMR1 precursor. ).
Length = 867
Score = 30.7 bits (66), Expect = 4.4
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 107 SCSHQSECAGIS--GSSCVRTPYDSATRCLCGDNSPPVNGQCEAQTKSLYHVCATSDEC- 163
SC EC + S+C TP + C C P NGQ + + C DEC
Sbjct: 166 SCEDIDECTEMCPINSTCTNTP--GSYFCTCHPGFAPSNGQLNFTDQGV--ECRDIDECR 221
Query: 164 GDELICGVPNITSTA 178
D CG +I + A
Sbjct: 222 QDPSTCGPNSICTNA 236
>AB065918-1|BAC06133.1| 929|Homo sapiens seven transmembrane helix
receptor protein.
Length = 929
Score = 30.7 bits (66), Expect = 4.4
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 107 SCSHQSECAGIS--GSSCVRTPYDSATRCLCGDNSPPVNGQCEAQTKSLYHVCATSDEC- 163
SC EC + S+C TP + C C P NGQ + + C DEC
Sbjct: 236 SCEDIDECTEMCPINSTCTNTP--GSYFCTCHPGFAPSNGQLNFTDQGV--ECRDIDECR 291
Query: 164 GDELICGVPNITSTA 178
D CG +I + A
Sbjct: 292 QDPSTCGPNSICTNA 306
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.322 0.133 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,489,057
Number of Sequences: 224733
Number of extensions: 1173793
Number of successful extensions: 1833
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1833
Number of HSP's gapped (non-prelim): 8
length of query: 227
length of database: 73,234,838
effective HSP length: 87
effective length of query: 140
effective length of database: 53,683,067
effective search space: 7515629380
effective search space used: 7515629380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
- SilkBase 1999-2023 -