GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001746-TA|BGIBMGA001746-PA|IPR013032|EGF-like region,
IPR006149|Nematode-specific EB region, IPR009030|Growth factor,
receptor
         (565 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    40   1e-04
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    29   0.25 
AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    27   1.8  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    27   1.8  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    25   4.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   5.4  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        25   7.1  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        25   7.1  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        25   7.1  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        25   7.1  
DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary ...    24   9.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   9.4  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 40.3 bits (90), Expect = 1e-04
 Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 22/174 (12%)

Query: 329 CRFFAG-IGETCEVDSDCLAGELEI--QCVKDEAGQGYCT---CPEDLIAVDGLCVTSGL 382
           C+ + G IG+TCE +        E+  QCV    G    T   C +    + G C  +  
Sbjct: 492 CQCYVGWIGKTCECNLQNSQNRRELFEQCVAPSVGDELRTGPICSDRGECICGQCYCNPG 551

Query: 383 VLGEACQ----VSLE---CSGTENAVCTDGVCSCNTGYQQVDDFCAPVIGGTCSVDSDCV 435
             GE C+     +++   C G ++ +CT G CSC   +   +  C     G  +  +D V
Sbjct: 552 FEGEHCECNECATIDGSICGGPDHGICTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAV 611

Query: 436 IP-NTACFEIDNSMTCQCKERFVAYDDECWPNVDGFQSA-CNVTAQCTQALGNE 487
              +  C    N   C C E F  +   C    DG Q A C+    C +   +E
Sbjct: 612 CSGHGQC----NCGRCSCDESF--FGPFC-ETKDGEQPALCSSYEDCIRCAVHE 658



 Score = 34.7 bits (76), Expect = 0.007
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 18/170 (10%)

Query: 389 QVSLECSGTENAVCTDGVCSCNTGYQQVDDFCAPVIGGTCS---VDSDCVIPNTACFEID 445
           ++S  C+   + VC  G C C  G+  +   C   +  + +   +   CV P+    E+ 
Sbjct: 476 ELSELCNFNGDYVC--GQCQCYVGW--IGKTCECNLQNSQNRRELFEQCVAPSVGD-ELR 530

Query: 446 NSMTCQCKERFVAYDDECWPNVDGFQSACNVTAQCTQAL---GNEGVCLDGACACVEGFH 502
               C  +   +     C P  +G    CN  A    ++    + G+C  G C+C + + 
Sbjct: 531 TGPICSDRGECICGQCYCNPGFEGEHCECNECATIDGSICGGPDHGICTCGTCSCFDSWS 590

Query: 503 HRGGRCWPITGLFEVCNRDSQCFLGDLTERVVCRNSLCQCDFSY--PYSE 550
                C   T   +  + D+ C     +    C    C CD S+  P+ E
Sbjct: 591 GDNCECTTDTTGCKAPSNDAVC-----SGHGQCNCGRCSCDESFFGPFCE 635


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 29.5 bits (63), Expect = 0.25
 Identities = 40/155 (25%), Positives = 53/155 (34%), Gaps = 32/155 (20%)

Query: 386 EACQVSL---ECSGTENAVCTDGVCSC----------NTGYQQVDDFCAPVIGGTCSVDS 432
           +AC++S    ECSG    VC  GVC C          +  Y + D+F     GG      
Sbjct: 549 DACRMSNASEECSGRGQCVC--GVCVCERRPNPDELIDGRYCECDNFSCDRPGGLLCSGP 606

Query: 433 D---CVIPNTACFEIDNSMTCQCKERFVAYDDECWPNVDGFQSACNVTAQCTQALGNEGV 489
           D   CV     C E      C C+    A ++ C P   G   + + T +C       G 
Sbjct: 607 DHGRCVCGQCECREGWTGPACDCR----ASNETCMPPGGGELCSGHGTCEC-------GT 655

Query: 490 CLDGACACVEGFHHRGGRCWPITGLFEVCNRDSQC 524
           C    C   E   + G  C         CN    C
Sbjct: 656 C---RCTVTEDGRYTGRYCEKCPTCAGRCNEFKHC 687



 Score = 26.6 bits (56), Expect = 1.8
 Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 15/86 (17%)

Query: 25  CSEDDDCSSLAGSV-CRSG----SCACPHGHQSVL---GGSLCATDGKCFC-------QE 69
           CS  D    + G   CR G    +C C   +++ +   GG LC+  G C C        E
Sbjct: 603 CSGPDHGRCVCGQCECREGWTGPACDCRASNETCMPPGGGELCSGHGTCECGTCRCTVTE 662

Query: 70  DHHYFRGRCWPIAEYGATCTRHEECL 95
           D  Y    C         C   + C+
Sbjct: 663 DGRYTGRYCEKCPTCAGRCNEFKHCV 688


>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
          protein.
          Length = 45

 Score = 26.6 bits (56), Expect = 1.8
 Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 3/29 (10%)

Query: 39 CRSGSCACPHGHQSVLGGSLCATDGKCFC 67
          C    C C  G  S   G  CATD KC C
Sbjct: 5  CCGNDCKCTSGCGS---GQPCATDCKCAC 30


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 26.6 bits (56), Expect = 1.8
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 3/24 (12%)

Query: 73  YFRGRCWPIAEYGATCTRHEECLS 96
           +  GRC  I   G +CTRHE C S
Sbjct: 303 HIEGRCKAI---GDSCTRHENCCS 323


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 25.4 bits (53), Expect = 4.1
 Identities = 11/28 (39%), Positives = 12/28 (42%)

Query: 481 TQALGNEGVCLDGACACVEGFHHRGGRC 508
           TQ   N G C+ G    V  F  R  RC
Sbjct: 84  TQCDSNRGYCVKGDACSVRTFRLRSNRC 111


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 25.0 bits (52), Expect = 5.4
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 5/27 (18%)

Query: 207 PCPSPYQCSKFSS----CV-CPVGYYG 228
           PCP+   C + +     C+ CPVGY+G
Sbjct: 777 PCPNNGACMQMAGDTVICLECPVGYFG 803


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.6 bits (51), Expect = 7.1
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 401 VCTDGVCSCNTGYQQVDDFCAPVIGGTCSVDSDCVIP-NTACFEIDNSMTCQCKERFVAY 459
           +CT G CSC   +   +  C     G  +  +D V   +  C    N   C C E F  +
Sbjct: 1   ICTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC----NCGRCSCDESF--F 54

Query: 460 DDECWPNVDGFQSA-CNVTAQCTQALGNE 487
              C    DG Q A C+    C +   +E
Sbjct: 55  GPFC-ETKDGEQPALCSSYEDCIRCAVHE 82


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.6 bits (51), Expect = 7.1
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 401 VCTDGVCSCNTGYQQVDDFCAPVIGGTCSVDSDCVIP-NTACFEIDNSMTCQCKERFVAY 459
           +CT G CSC   +   +  C     G  +  +D V   +  C    N   C C E F  +
Sbjct: 1   ICTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC----NCGRCSCDESF--F 54

Query: 460 DDECWPNVDGFQSA-CNVTAQCTQALGNE 487
              C    DG Q A C+    C +   +E
Sbjct: 55  GPFC-ETKDGEQPALCSSYEDCIRCAVHE 82


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.6 bits (51), Expect = 7.1
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 401 VCTDGVCSCNTGYQQVDDFCAPVIGGTCSVDSDCVIP-NTACFEIDNSMTCQCKERFVAY 459
           +CT G CSC   +   +  C     G  +  +D V   +  C    N   C C E F  +
Sbjct: 1   ICTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC----NCGRCSCDESF--F 54

Query: 460 DDECWPNVDGFQSA-CNVTAQCTQALGNE 487
              C    DG Q A C+    C +   +E
Sbjct: 55  GPFC-ETKDGEQPALCSSYEDCIRCAVHE 82


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.6 bits (51), Expect = 7.1
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 401 VCTDGVCSCNTGYQQVDDFCAPVIGGTCSVDSDCVIP-NTACFEIDNSMTCQCKERFVAY 459
           +CT G CSC   +   +  C     G  +  +D V   +  C    N   C C E F  +
Sbjct: 1   ICTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC----NCGRCSCDESF--F 54

Query: 460 DDECWPNVDGFQSA-CNVTAQCTQALGNE 487
              C    DG Q A C+    C +   +E
Sbjct: 55  GPFC-ETKDGEQPALCSSYEDCIRCAVHE 82


>DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary
           secreted peptide withTIL domain protein.
          Length = 99

 Score = 24.2 bits (50), Expect = 9.4
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 4/27 (14%)

Query: 104 LRCDGTCV----CATGYYSRQRGECRK 126
           L C G CV    C  GY+ R+   C K
Sbjct: 50  LSCTGVCVSGCFCRPGYFRREDNACVK 76


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 9.4
 Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 9/140 (6%)

Query: 276 VKVTRRITDSCVSDMNCFTFGSAARCGPPQQPWQLRSCECIPELA-VWDADRNICRFFAG 334
           V+  R  T+     M C    S A C   + P Q   C+ +       D+ +++ R ++ 
Sbjct: 456 VQKNRNATECHEEGMECSEQCSKAGCWG-KGPEQCLECKNVKYKGKCLDSCKSLPRLYSV 514

Query: 335 IGETCEVDSDCLAGELEIQCVKDEAGQGYCTCPEDLIAVDGLCVTSGLVLGEAC----QV 390
             +TC    DC     +     +E   G C   +D       C T+   +   C    + 
Sbjct: 515 DSKTC---GDCHQECKDFCYGPNEDNCGSCMNVKDGRFCVAECPTTKHAMNGTCINCHKT 571

Query: 391 SLECSGTENAVCTDGVCSCN 410
            + C G  + +  DG  SC+
Sbjct: 572 CVGCRGPRDTIAPDGCISCD 591


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.139    0.482 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,690
Number of Sequences: 2123
Number of extensions: 34482
Number of successful extensions: 73
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 55
Number of HSP's gapped (non-prelim): 32
length of query: 565
length of database: 516,269
effective HSP length: 68
effective length of query: 497
effective length of database: 371,905
effective search space: 184836785
effective search space used: 184836785
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 50 (24.2 bits)