Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001745-TA|BGIBMGA001745-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
         (306 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...   101   1e-23

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score =  101 bits (241), Expect = 1e-23
 Identities = 83/264 (31%), Positives = 122/264 (46%), Gaps = 29/264 (10%)

Query: 44  CDYTGIKLIVGGENANNGEFPHMAAIGWTNFEGSYTFSCGGSLISPRFVLTAGHCSSNPQ 103
           C +     IVGG N    EFP MA I  T   G     CG ++IS R+VLTA HC  +  
Sbjct: 153 CGWKNPSRIVGGTNTGINEFPMMAGIKRTYEPGMI---CGATIISKRYVLTAAHCIID-- 207

Query: 104 AKDPEPVIVRLGDQNIDPTVDDGASPIDVPIRKINKHPEY----APPMVYNDIALLELAT 159
            ++   + + +G+ +     +  A+ +   I K+  HP+Y          NDIALL+   
Sbjct: 208 -ENTTKLAIVVGEHDWSSKTETNATVLH-SINKVIIHPKYDIIEKDDWQINDIALLKTEK 265

Query: 160 DVEFSAAIRPACLWTRQDFGDH---DKALATGWGVTNTETRETAKELQKVSLSLLQNEYC 216
           D++F   + PACL   Q F D          GWG T+      +  LQK +L++L    C
Sbjct: 266 DIKFGDKVGPACL-PFQHFLDSFAGSDVTVLGWGHTSFNGM-LSHILQKTTLNMLTQVEC 323

Query: 217 DGILEAIRNRRWQGFAATQMCAGELRGGKDTCQGDSGSPLQVASKDNQCIFHVVGVTSFG 276
                    + +       MCA     GKD CQ DSG P+   +   + + + +G+ S+G
Sbjct: 324 --------YKYYGNIMVNAMCA--YAKGKDACQMDSGGPVLWQNPRTKRLVN-IGIISWG 372

Query: 277 RRCAESGYPAIYTRVASFIDWIES 300
             C +  YP   T+V S+IDWI S
Sbjct: 373 AECGK--YPNGNTKVGSYIDWIVS 394


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.135    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,281
Number of Sequences: 429
Number of extensions: 3867
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 306
length of database: 140,377
effective HSP length: 58
effective length of query: 248
effective length of database: 115,495
effective search space: 28642760
effective search space used: 28642760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)