Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001745-TA|BGIBMGA001745-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
(306 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0935 - 28948368-28948769,28949028-28949120,28949240-289493... 33 0.38
05_05_0173 + 22956927-22958615 30 2.7
05_04_0384 - 20809397-20811547 29 3.5
02_05_0018 - 25011623-25013764 29 3.5
04_04_0523 - 25900802-25902548,25902640-25903037 29 4.7
10_05_0091 - 9085506-9085758,9085838-9085992,9086091-9086132,908... 29 6.2
06_01_0582 + 4172154-4173614 29 6.2
02_05_0016 - 25004075-25005821,25006394-25006527 29 6.2
12_01_0431 + 3396661-3397283,3399679-3399775 28 8.2
02_05_0019 - 25025218-25026964,25027084-25027478 28 8.2
>03_05_0935 -
28948368-28948769,28949028-28949120,28949240-28949329,
28949413-28949477,28950442-28950512,28950610-28950648,
28950832-28951250
Length = 392
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 85 SLISPRFVLTAGHCSSNPQAKDPEPVIVRLGDQ 117
+LI+PR+ TA H + P ++DPE + + DQ
Sbjct: 266 ALIAPRYQFTASHRNGPPVSRDPEALKAKYSDQ 298
>05_05_0173 + 22956927-22958615
Length = 562
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 140 HPEYAPPMVYNDIALLELATDVEFSAAIRPACL 172
HP Y PP V A+ ELA D+EF + P L
Sbjct: 94 HPPYVPPPVPPPEAIPELADDLEFGFSHPPLLL 126
>05_04_0384 - 20809397-20811547
Length = 716
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 191 VTNTETRETAKELQKVSLSLLQNEYCDGILEAIRNRRWQG 230
+T +TR +EL KV +++ Q ++ D +LE + + W G
Sbjct: 673 LTGEKTRSPGEELNKVLVAINQGKHIDPLLECL--KEWNG 710
>02_05_0018 - 25011623-25013764
Length = 713
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 191 VTNTETRETAKELQKVSLSLLQNEYCDGILEAIRNRRWQG 230
+T +TR +EL KV +++ Q ++ D +LE + + W G
Sbjct: 670 LTGEKTRSPGEELNKVLVAINQGKHIDPLLECL--KEWNG 707
>04_04_0523 - 25900802-25902548,25902640-25903037
Length = 714
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 191 VTNTETRETAKELQKVSLSLLQNEYCDGILEAIRNRRWQG 230
+T +TR +E+ KV +++ Q ++ D +LE + + W G
Sbjct: 671 LTGEKTRSPGEEVNKVFVAMNQGKHIDALLECL--KEWNG 708
>10_05_0091 -
9085506-9085758,9085838-9085992,9086091-9086132,
9086379-9086921,9087003-9087287,9087332-9087463,
9087542-9087729,9088186-9088240
Length = 550
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 107 PEPVIVRLGDQNIDPTVDDGASPIDVPIRKINKHPEYAPPMVYNDIALLELATDVEFSAA 166
PEP + DP V+ +S + + R++ + P + N++ L + T+V
Sbjct: 389 PEPKRGKAATSMPDPEVEHWSSKMLLLSRRLGNQVGFLDPSMVNEVNLRQSFTEV---VD 445
Query: 167 IRPACLWTRQD 177
CLW QD
Sbjct: 446 YVNRCLWAHQD 456
>06_01_0582 + 4172154-4173614
Length = 486
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 52 IVGGENANNGEFPHMAAIGWTNFEGSYTFSCGGSLISPRFVLTAGHCSSNPQAKDPEPVI 111
+VGG+ +++G + G ++ +GS SC S + A P PV+
Sbjct: 13 VVGGDGSSSGGSSPASVSGPSDSDGS---SCSSSSAADELFPDAREL---PSTSASVPVL 66
Query: 112 VRLGDQNIDPTVDDGASPIDVPIRKINK-HPEYAPP 146
+G I PT S IDV ++++ + P +A P
Sbjct: 67 AGVGFHPISPTSLSVLSDIDVHMQRMARLLPAFASP 102
>02_05_0016 - 25004075-25005821,25006394-25006527
Length = 626
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 191 VTNTETRETAKELQKVSLSLLQNEYCDGILEAIRNRRWQGFAATQMC 237
+T +TR +EL KV +++ + ++ D +LE + + W G A +C
Sbjct: 583 LTGEKTRSPGEELNKVLVAINERKHIDPLLECL--KEWNG-APLPLC 626
>12_01_0431 + 3396661-3397283,3399679-3399775
Length = 239
Score = 28.3 bits (60), Expect = 8.2
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Query: 180 DHDKALATGW-GVTNTETRETAKELQKVSLSLLQNEYCDGILEA-IRNRRWQGFAATQMC 237
D D A++ G+T+ E R+ ++E + SL D EA IR R+ G T+M
Sbjct: 34 DGDAAISAACAGITDWEERKASEERAIEAESLHYRAERDAAAEAVIRRRKAGGGGVTKM- 92
Query: 238 AGELRGGKDTCQGDSGSPLQVASKDNQCIFHVVGVTSFGRRCAESGYPAIYTR 290
L G D + D G L+ D + V GV+S R + + PA + R
Sbjct: 93 -SFLSPG-DLFERD-GDILEGIDPDPPVVADVPGVSSLVFRLSSARTPADFER 142
>02_05_0019 - 25025218-25026964,25027084-25027478
Length = 713
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 191 VTNTETRETAKELQKVSLSLLQNEYCDGILEAIRNRRWQG 230
+T +TR +EL KV +++ + ++ D +LE + + W G
Sbjct: 670 LTGEKTRSPGEELNKVLVAINEGKHIDPLLECL--KEWNG 707
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.135 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,452,257
Number of Sequences: 37544
Number of extensions: 403095
Number of successful extensions: 766
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 764
Number of HSP's gapped (non-prelim): 10
length of query: 306
length of database: 14,793,348
effective HSP length: 82
effective length of query: 224
effective length of database: 11,714,740
effective search space: 2624101760
effective search space used: 2624101760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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