Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001744-TA|BGIBMGA001744-PA|IPR007087|Zinc finger,
C2H2-type
(663 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 58 3e-09
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 50 1e-06
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 49 2e-06
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 46 2e-05
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 46 2e-05
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 42 2e-04
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 42 4e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 38 0.003
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 37 0.010
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 37 0.010
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 36 0.014
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 36 0.018
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 34 0.073
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 33 0.096
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 33 0.13
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 29 1.6
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 28 3.6
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 6.3
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 27 8.3
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 58.4 bits (135), Expect = 3e-09
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 27/155 (17%)
Query: 456 HFRRMHPDKNRTNYPSMKT--PCMCEVCGRMFQSQALLNDHRWVHTGEKPFKCEV--CDK 511
HF + + N S K C E CG+ + +LL H H+ E+PF C+ C K
Sbjct: 3 HFNELSIEIESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSK 62
Query: 512 TFRMRQRLMTHRRVHSRDRASYGCAL--CGKHFSSQSNRQRHMFYRLRLVIGSRLITAVP 569
F + L H+R H+ + + C C F +Q + +RH+
Sbjct: 63 AFYRKSHLKIHKRCHTNVK-PFSCHYDGCDAQFYTQQHLERHI----------------- 104
Query: 570 GQIHTGLKPYKC--EMCGKGFKHTSEKRAHITYVH 602
++H KPY C E C + F + R+HI+ H
Sbjct: 105 -EVHRKPKPYACTWEGCDECFSKHQQLRSHISACH 138
Score = 43.6 bits (98), Expect = 9e-05
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 478 CEVCGRMFQSQALLNDHRWVHTG----EKPFKC--EVCDKTFRMRQRLMTHRRVHSRDRA 531
C +CGR F++ A L H +H K + C E C K+F L H V
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 532 SYGCALCGKHFSSQSNRQRHM 552
++ C CG F + QRH+
Sbjct: 266 AFHCDSCGTKFGYKHMLQRHL 286
Score = 42.7 bits (96), Expect = 2e-04
Identities = 38/160 (23%), Positives = 62/160 (38%), Gaps = 19/160 (11%)
Query: 457 FRRMHPDKNRTNYPSMKT-PCMCEVCGRMFQSQALLNDHRWVHTGEKPFKC--EVCDKTF 513
+R+ H ++ + ++K C + C F +Q L H VH KP+ C E CD+ F
Sbjct: 65 YRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECF 124
Query: 514 RMRQRLMTHRRVHSRDRASYGCAL--CGKHFSSQSNRQRHMFYRLRLVI----------- 560
Q+L +H Y C C F+++ Q H+ +I
Sbjct: 125 SKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVG 184
Query: 561 --GSRLITAVPGQIHTGLKPYKCEMCGKGFKHTSEKRAHI 598
G + + I P C +CG+ FK + R H+
Sbjct: 185 HEGFEKWSQLQNHIREAHVP-SCSICGRQFKTAAHLRHHV 223
Score = 39.1 bits (87), Expect = 0.002
Identities = 47/175 (26%), Positives = 65/175 (37%), Gaps = 25/175 (14%)
Query: 449 DPRAYHKHFRRMHPDKNRTNYPSMKTPCMCEVCGRMFQSQALLNDH-RWVHTGEKPFKC- 506
D + Y + H + +R P C E C F L H HT P+ C
Sbjct: 91 DAQFYTQQHLERHIEVHRKPKPYA---CTWEGCDECFSKHQQLRSHISACHTHLLPYPCT 147
Query: 507 -EVCDKTFRMRQRLMTH-RRVHSRDRASYGCA--LCGKH--FSSQSNRQRHM---FYRLR 557
+ C+ F +Q+L H R H + SY C C H F S Q H+
Sbjct: 148 YQDCELRFATKQKLQNHVNRAHEKI-ISYSCPHESCVGHEGFEKWSQLQNHIREAHVPSC 206
Query: 558 LVIGSRLITAVPGQIHTGL--------KPYKCEM--CGKGFKHTSEKRAHITYVH 602
+ G + TA + H L K Y C M C K F +S + HI+ +H
Sbjct: 207 SICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIH 261
Score = 30.7 bits (66), Expect = 0.68
Identities = 39/198 (19%), Positives = 69/198 (34%), Gaps = 15/198 (7%)
Query: 205 TQLSVEEQVAEIHKRKEGSNYRNGVFKCDECFKGFQDADAYSSHMTRHTDQCGDHQCLV- 263
TQ +E + E+H++ + Y CDECF Q SH++ + C
Sbjct: 96 TQQHLERHI-EVHRKPKP--YACTWEGCDECFSKHQQ---LRSHISACHTHLLPYPCTYQ 149
Query: 264 -CRIYFRNQHALRKHMTAHHSS--RFSC--KQCPFVTNHRQTARLHERWHCGTKYRCPHC 318
C + F + L+ H+ H +SC + C + ++L C C
Sbjct: 150 DCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVPSCSIC 209
Query: 319 PEEFVKFTTYMGHLRIKHPSDFVCELCGYCFVSA--KGIMLHKQLKHRLEDGKVPEKGPY 376
+F K ++ H + H + +C + K LK + +
Sbjct: 210 GRQF-KTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFH 268
Query: 377 CEQCDVRFVSPDAYDRHM 394
C+ C +F RH+
Sbjct: 269 CDSCGTKFGYKHMLQRHL 286
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 476 CMCEVCGRMFQSQALLNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGC 535
C C + F L H HT +PF+C +C K+F + H ++H+ +A + C
Sbjct: 572 CTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKA-FAC 630
Query: 536 ALCGKHFSSQSNRQRH 551
C + F+ RH
Sbjct: 631 VTCNQRFARMDALNRH 646
Score = 43.6 bits (98), Expect = 9e-05
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 454 HKHFRRMHPDKNRTNYPSMKTPCMCEVCGRMFQSQALLNDHRWVHTGEKPFKCEVCDKTF 513
+K F R + K+ N + P C +C + F Q H +HTG K F C C++ F
Sbjct: 578 NKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRF 637
Query: 514 RMRQRLMTH 522
L H
Sbjct: 638 ARMDALNRH 646
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 219 RKEGSNYRNGVFKCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFRNQHALRKHM 278
+ E + N V C K F A SHM HT+ QC +C+ F QH R+H
Sbjct: 561 KSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNY-RPFQCSICKKSFARQHDKRRHE 619
Query: 279 TAHHSSR-FSCKQC 291
H + F+C C
Sbjct: 620 QLHTGIKAFACVTC 633
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 238 GFQDADAYSSHMTRHTDQCGDHQCLV--CRIYFRNQHALRKHMTAHHSSR-FSCKQCPFV 294
G + ++ SS + G++ C C F + L+ HM H + R F C C
Sbjct: 549 GNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKS 608
Query: 295 TNHRQTARLHERWHCGTK-YRCPHCPEEFVKFTTYMGHLR 333
+ R HE+ H G K + C C + F + H +
Sbjct: 609 FARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 31.9 bits (69), Expect = 0.29
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 573 HTGLKPYKCEMCGKGFKHTSEKRAH 597
HT +P++C +C K F +KR H
Sbjct: 594 HTNYRPFQCSICKKSFARQHDKRRH 618
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 48.8 bits (111), Expect = 2e-06
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 455 KHFRRMHPDKNRTNYPSMK--TPCMCEVCGRMFQSQALLNDH-RWVHTGEKPFKCEVCDK 511
K +R P +T+ P +C C + F+ L H R +HT EKPF C +C K
Sbjct: 400 KRRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGK 458
Query: 512 TFRMRQRLMTHRRVHSRDRASYGC 535
F R L H R+H C
Sbjct: 459 RFSRRDNLRQHERLHVNASPRLAC 482
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 500 GEKPFKCEVCDKTFRMRQRLMTH-RRVHSRDRASYGCALCGKHFSSQSNRQRH 551
G K F C C K F+ + L H R +H+ ++ + C +CGK FS + N ++H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEK-PFVC-ICGKRFSRRDNLRQH 469
Score = 33.5 bits (73), Expect = 0.096
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 310 GTKYRCPHCPEEFVKFTTYMGHLRIKHPSD--FVCELCGYCFVSAKGIMLHKQL 361
G + CP C ++F + H+R H S+ FVC +CG F + H++L
Sbjct: 420 GKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERL 472
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 261 CLVCRIYFRNQHALRKHMTAHHSSR--FSCKQCPFVTNHRQTARLHERWHCGTKYR 314
C C F+ LR+H+ + H+S F C C + R R HER H R
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNASPR 479
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 566 TAVPGQIHTGLKPYKCEMCGKGFKHTSEKRAHITYVH 602
T+VP G K + C C K FK + R HI +H
Sbjct: 412 TSVPRS--PGGKSFVCPECSKKFKRSEHLRRHIRSLH 446
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 478 CEVCGRMFQSQALLNDHRWVHTGEKPFKCEV--CDKTFRMRQRLMTHRRVH 526
C C + F + L H + HTGE+PF C+ C K F +R + H+R+H
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 30.7 bits (66), Expect = 0.68
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 504 FKCEVCDKTFRMRQRLMTHRRVHSRDRASYGC--ALCGKHFSSQSNRQRH 551
++C C + F L H H+ +R + C A CGK F+ +SN +RH
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERP-FVCDYAGCGKAFNVRSNMRRH 516
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 208 SVEEQVAEIHKRKEG-SNYRNGVFKCDECFKGFQDADAYSSHMTRHTDQCGDHQC--LVC 264
S ++A+ H S+ N ++C EC +GF + H HT + C C
Sbjct: 445 STSRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGE-RPFVCDYAGC 503
Query: 265 RIYFRNQHALRKHMTAH 281
F + +R+H H
Sbjct: 504 GKAFNVRSNMRRHQRIH 520
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 573 HTGLKPYKCEM--CGKGFKHTSEKRAH 597
HTG +P+ C+ CGK F S R H
Sbjct: 490 HTGERPFVCDYAGCGKAFNVRSNMRRH 516
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 478 CEVCGRMFQSQALLNDHRWVHTGEKPFKCEV--CDKTFRMRQRLMTHRRVHSR 528
C C R+F Q H HTGEKPF+C C K F R L+ H R H R
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLR 58
Score = 31.1 bits (67), Expect = 0.51
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 502 KPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCAL--CGKHFSSQSNRQRHMFYRLR 557
K ++C C + F ++ + H R H+ ++ + C+ C K F+ + RH+ LR
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEK-PFECSYPSCKKRFTRRDELIRHVRTHLR 58
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 473 KTPCMCEVCGRMFQSQALLNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRAS 532
K C+ C + + + H H ++P++C++C F L H R+H R
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGR-P 500
Query: 533 YGCALCGKHFSSQSNRQRH 551
Y C C K F+ RH
Sbjct: 501 YVCE-CLKRFNRLDALNRH 518
Score = 29.1 bits (62), Expect = 2.1
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 15/87 (17%)
Query: 312 KYRCPH--CPEEFVKFTTYMGHLRIKHPSD--FVCELCGYCFVSAKGIMLHKQLKHRLED 367
KY C + C + + H++ H SD + C+LC G + H LK L
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQT-HLSDRPYRCDLC------KAGFVRHHDLKRHL-- 492
Query: 368 GKVPEKG-PYCEQCDVRFVSPDAYDRH 393
++ E G PY +C RF DA +RH
Sbjct: 493 -RIHENGRPYVCECLKRFNRLDALNRH 518
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 571 QIHTGLKPYKCEMCGKGFKHTSEKRAHI 598
Q H +PY+C++C GF + + H+
Sbjct: 465 QTHLSDRPYRCDLCKAGFVRHHDLKRHL 492
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 304 HERWHCGTK-YRCPHCPEEFVKFTTYMGHLRI-KHPSDFVCELCGYCFVSAKGIMLHKQ 360
H + H + YRC C FV+ HLRI ++ +VCE C F + HKQ
Sbjct: 463 HIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRHKQ 520
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 247 SHMTRHTDQCGDHQCLVCRIYFRNQHALRKHMTAHHSSRFSCKQC 291
SH+ H ++C +C+ F H L++H+ H + R +C
Sbjct: 462 SHIQTHLSD-RPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCEC 505
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 467 TNYPSMKTPCMCEVCGRMFQSQALLNDHRWVHTGEKPFKCEV--CDKTFRMRQRLMTHRR 524
T P P C +C + F H HTGEKP C C K F L H R
Sbjct: 17 TKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR 76
Query: 525 VH--SRDRASYGCALCGKHFSSQSN 547
+H + R + A + + SN
Sbjct: 77 IHTNANSRRNAAAAAAANNSARSSN 101
Score = 27.1 bits (57), Expect = 8.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 577 KPYKCEMCGKGFKHTSEKRAHI 598
+PYKC +C K F + HI
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHI 45
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Query: 230 FKCDECFKGFQDADAYSSHMTRHTDQCGDHQCLV--CRIYFRNQHALRKHMTAH 281
+KC C K F + + H+ HT + H C C F L +H H
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGE-KPHVCTFPGCAKRFSRSDELTRHARIH 78
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 478 CEVCGRMFQSQALLNDHRWVHTGEKPFKCEV--CDKTFRMRQRLMTH-RRVHSRD 529
C G + S+ L H HTGEKPF C V CD++F L H R VH D
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 36.7 bits (81), Expect = 0.010
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 464 KNRTNYPSMKTP-CMCEVCGRMFQSQALLNDHRWVHTGEKPFKC-EV------CDKTFRM 515
K N P K +CE C R F L H HT EKPF C E+ C + F
Sbjct: 57 KKDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSR 116
Query: 516 RQRLMTH-RRVH 526
R L+ H +++H
Sbjct: 117 RDLLLRHQQKIH 128
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 502 KPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCAL-------CGKHFSSQSNRQRH 551
K + CE C + F + L H R H+ ++ + C+ CG+ FS + RH
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEK-PFTCSEIDGLPTGCGRQFSRRDLLLRH 123
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 36.7 bits (81), Expect = 0.010
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 533 YGCAL--CGKHFSSQSNRQRHMFYRLRLVIGSRLITAVPGQ-IHTGLKPYKCEMCGKGFK 589
Y C + C K + +Q+ + H + I + +P Q KPY+CE+C K +K
Sbjct: 350 YKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVCSKRYK 409
Query: 590 HTSEKRAHITYVHL 603
+ + + H T+ HL
Sbjct: 410 NLNGLKYHRTHSHL 423
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 494 HRWVHTGEKPFKCEVCDKTFRMRQRLMTHRRVHSRDRAS 532
H+ KP++CEVC K ++ L H R HS + S
Sbjct: 389 HQGFVVENKPYRCEVCSKRYKNLNGLKYH-RTHSHLQVS 426
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 36.3 bits (80), Expect = 0.014
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 188 RRKPFMNAELSDTLFTTTQLSVEEQVAEIHKRKEGSNYRNGVFKCDECFKGFQDADAYSS 247
+RK LS +F LS+++Q E+ K+ E Y+N C+ C K F AYSS
Sbjct: 34 KRKVASLPPLSAEVFAGKILSIQKQNEEVQKKAEF--YQN----CEVCNKKFYSEGAYSS 87
Query: 248 HMT--RHTDQCGDHQ 260
HM +H D Q
Sbjct: 88 HMASKKHRDNLSKFQ 102
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 3/85 (3%)
Query: 251 RHTDQCGDHQCLVCRIYFRNQHALRKHMTAHHSSRFSCKQCPFVTNHRQTARLHERWHCG 310
R + + CL C F + +KHM A HS ++ V L E+ G
Sbjct: 200 RSSQRLSPRDCLFCAASFSSFDTCKKHMKASHSLYIPEREY-LVDEPSLFDYLAEKISIG 258
Query: 311 TKYRCPHCPEEFVKFTTYMGHLRIK 335
+ C C EF H++ K
Sbjct: 259 --FTCLTCNREFKSLEAVRAHMQQK 281
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 377 CEQCDVRFVSPDAYDRHMIVSAKH 400
CE C+ +F S AY HM S KH
Sbjct: 72 CEVCNKKFYSEGAYSSHM-ASKKH 94
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 35.9 bits (79), Expect = 0.018
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 485 FQSQALLNDHRWVHTGEKPFKCEV--CDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHF 542
F + L R G+ F C C K+F ++ L H R H +A + C+ C + F
Sbjct: 7 FTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKA-FSCSFCNRAF 65
Query: 543 SSQSNRQRHM 552
+ RH+
Sbjct: 66 ARSDVLNRHV 75
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/47 (27%), Positives = 17/47 (36%)
Query: 476 CMCEVCGRMFQSQALLNDHRWVHTGEKPFKCEVCDKTFRMRQRLMTH 522
C C + F + L H H K F C C++ F L H
Sbjct: 28 CTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
Score = 27.5 bits (58), Expect = 6.3
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 573 HTGLKPYKCEMCGKGFKHTSEKRAHITYVHL 603
H +K + C C + F + H+ +HL
Sbjct: 50 HENVKAFSCSFCNRAFARSDVLNRHVQQMHL 80
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 33.9 bits (74), Expect = 0.073
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 507 EVCDKTFRMRQRLMTHR-RVHSRDRASYGCALCG--KHFSSQSNRQRHM 552
E+C+ F L+ H+ +H++ R + C +CG +HFS RH+
Sbjct: 583 EICNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHL 631
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 33.5 bits (73), Expect = 0.096
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 285 RFSC--KQCPFVTNHRQTARLHERWHCGTK-YRCPHCPEEFVKFTTYMGHLRIKH 336
R+ C + C ++ AR H R H +K + CPHC F + H+ KH
Sbjct: 16 RYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
Score = 30.7 bits (66), Expect = 0.68
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 500 GEKPFKCEV--CDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQRHM 552
G+ +KC+ C K+F ++ H R H+ +A + C C F+ RH+
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKA-FICPHCSSSFTRSDVLNRHV 66
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 229 VFKCDECFKGFQDADAYSSHMTRHTDQCGDHQCLVCRIYFRNQHALRKHMTAHHSSR 285
VF CD+C K F + + H H+ + C C I + + L++H+ H+ +
Sbjct: 30 VFPCDQCAKRFTRHENLTRHKACHS-KAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 501 EKPFKCEVCDKTFRMRQRLMTHRRVHSRDRASYGCALCGKHFSSQSNRQRHM 552
++ F C+ C K F + L H+ HS+ C C + +RH+
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSK-AEPIPCPYCEIKCKRKDLLKRHI 78
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 12/74 (16%)
Query: 331 HLRIKHPSDFVCELC---------GYCFVSAKGIMLHKQLKHRLEDGKVPE-KG-PYCEQ 379
H ++KH F C+LC + S KG+ H ++ + D ++ KG P CE
Sbjct: 191 HAKVKHHK-FFCDLCVKNKKVFTHEHTLFSKKGLTKHNEVGDQGSDLEITGFKGHPKCEF 249
Query: 380 CDVRFVSPDAYDRH 393
C+ F D +H
Sbjct: 250 CNTHFYDDDELFKH 263
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 200 TLFTTTQLSVEEQVAEIHKRKEGSNYRNGVFKCDECFKGFQDADAYSSHMTRHTDQCGDH 259
TLF+ L+ +V + E + ++ G KC+ C F D D H ++C
Sbjct: 216 TLFSKKGLTKHNEVGDQGSDLEITGFK-GHPKCEFCNTHFYDDDELFKHCREKHERCYIC 274
Query: 260 QCLVCR---IYFRNQHALRKHMTAHH 282
+ R YF+N +L +H H
Sbjct: 275 DQVAGRPTHQYFKNYDSLERHFEKDH 300
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 444 GLQLDDPR-AYHKHFRRMHPDKNRTN 468
G+ +DD R Y K +HPDKNR N
Sbjct: 41 GMSVDDIRNLYRKKSLMIHPDKNRDN 66
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/50 (26%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 112 QDDAELEPEETKYDVQGGDVTADVDTQEYVIVKSDQVDDGFSSDDNLPLE 161
+D +L PE+ K D + GDV+ D D ++ + +D+ + ++ + P++
Sbjct: 4081 EDHLDL-PEDLKLDEKEGDVSKDSDLEDMDMEAADENKEEADAEKDEPMQ 4129
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 340 FVCELCGYCFVSAKGIMLHKQLKHRLE 366
F C+ C FV G+ HK+ H++E
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTYHQVE 165
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.323 0.135 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,783,518
Number of Sequences: 5004
Number of extensions: 106085
Number of successful extensions: 328
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 234
Number of HSP's gapped (non-prelim): 84
length of query: 663
length of database: 2,362,478
effective HSP length: 77
effective length of query: 586
effective length of database: 1,977,170
effective search space: 1158621620
effective search space used: 1158621620
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 57 (27.1 bits)
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