Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001743-TA|BGIBMGA001743-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type, IPR006612|Zinc finger,
C2CH-type
(477 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 52 8e-07
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 46 5e-05
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 46 7e-05
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 45 1e-04
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 45 1e-04
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 42 9e-04
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 41 0.002
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 38 0.019
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 37 0.025
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 37 0.025
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 37 0.034
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 36 0.078
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 35 0.14
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 34 0.18
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 34 0.24
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 33 0.31
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 33 0.31
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 33 0.41
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 33 0.55
At4g16180.1 68417.m02456 expressed protein ; expression supporte... 32 0.72
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 32 0.72
At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 32 0.96
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 32 0.96
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 32 0.96
At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein ... 31 1.3
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 31 1.3
At4g21030.1 68417.m03042 Dof-type zinc finger domain-containing ... 31 1.7
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 31 1.7
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 30 2.9
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 30 2.9
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 30 2.9
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 30 2.9
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 30 3.9
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 30 3.9
At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein ... 29 5.1
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 29 5.1
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 29 6.8
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 29 6.8
At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein ... 29 8.9
At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein ... 29 8.9
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 52.0 bits (119), Expect = 8e-07
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 361 MALLKDHMWVHTGEKRFKCDR--CPKSFTQKTNLVFHLRVHSATRPSYECPL--CGKHFA 416
++ L+ H +H GE+++ CD+ C K F + L H +H+ R +Y C CGK F+
Sbjct: 93 VSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRHYLIHTGER-NYICTYEGCGKAFS 150
Query: 417 FYNNRRRHMFIHTGLKPYKC--DTCLKCFTTSGELRAHVEHVHMK 459
N R HM H+ + C C+K + +L+ HV H K
Sbjct: 151 LDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEK 195
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 372 TGEKRFKC--DRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHT 429
T E F C D C K+F + L H +H + + CGK F + +RH IHT
Sbjct: 74 TTEILFLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHT 133
Query: 430 GLKPYKC--DTCLKCFTTSGELRAHVE 454
G + Y C + C K F+ LR+H++
Sbjct: 134 GERNYICTYEGCGKAFSLDFNLRSHMK 160
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 46.0 bits (104), Expect = 5e-05
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 375 KRFKC--DRCPKSFTQKTNLVFHLRVHSATRPSYECPL--CGKHFAFYNNRRRHMFIHTG 430
KR +C + C K F LV H RVH RP +EC C F + R H+ +HTG
Sbjct: 1236 KRNRCTHEGCGKKFRAHKYLVLHQRVHKDERP-FECSWKGCSMTFKWQWARTEHLRLHTG 1294
Query: 431 LKPYKC--DTCLKCFTTSGELRAH 452
+PY C D C F + H
Sbjct: 1295 ERPYICKVDGCGLSFRFVSDYSRH 1318
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 45.6 bits (103), Expect = 7e-05
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 382 CPKSFTQKTNLVFHLRVHSATRPSYECPL--CGKHFAFYNNRRRHMFIHTGLKPYKC 436
C K+F LV H RVHS RP +CP C F + +R H+ +HTG +PY C
Sbjct: 1267 CGKNFFSHKYLVQHQRVHSDDRP-LKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVC 1322
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 44.8 bits (101), Expect = 1e-04
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRV--HSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLKP 433
R +C C K F ++ +LV H+++ HS +P C +C KH + + R H+ + L
Sbjct: 16 RHRCVACYKMFNRREHLVEHMKISYHSLHQP--RCGVCLKHCKSFESVREHLNVPDHLSK 73
Query: 434 YKCDT---------CLKCFTTSGELRAHVEHVHMKKPWPKRARTNRQ-SDALA 476
C CL+ F + L H H+ P P T R S +LA
Sbjct: 74 GNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRNPSSSLA 126
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 267 SAPYKCTTCYRGFLNRERGVAREHEKWHAGTKYQCPHCCSEFEAFPS 313
S ++C CY+ F RE V +H+ + +C C ++F S
Sbjct: 14 SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFES 60
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 44.8 bits (101), Expect = 1e-04
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRV--HSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLKP 433
R +C C K F ++ +LV H+++ HS +P C +C KH + + R H+ + L
Sbjct: 16 RHRCVACYKMFNRREHLVEHMKISYHSLHQP--RCGVCLKHCKSFESVREHLNVPDHLSK 73
Query: 434 YKCDT---------CLKCFTTSGELRAHVEHVHMKKPWPKRARTNRQ-SDALA 476
C CL+ F + L H H+ P P T R S +LA
Sbjct: 74 GNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRNPSSSLA 126
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 267 SAPYKCTTCYRGFLNRERGVAREHEKWHAGTKYQCPHCCSEFEAFPS 313
S ++C CY+ F RE V +H+ + +C C ++F S
Sbjct: 14 SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFES 60
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 41.9 bits (94), Expect = 9e-04
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 379 CDRCPKSFTQKTNLVFHLRVHSATRPSYECPL--CGKHFAFYNNRRRHMFIHTGLKPYKC 436
C C F + +L H++ HS R S+ C + C + ++ RH+ H G K +KC
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLER-SFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKC 125
Query: 437 --DTCLKCFTTSGELRAHVEHVH 457
+ C F+ G + HV+ H
Sbjct: 126 PKENCKSEFSVQGNVGRHVKKYH 148
Score = 38.7 bits (86), Expect = 0.008
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 362 ALLKDHMWVHTGEKRFKC--DRCPKSFTQKTNLVFHLRVHSATRPSYECPL--CGKHFAF 417
A LK HM H+ E+ F C D C S+ +K +L HL H ++CP C F+
Sbjct: 79 AHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG--KLFKCPKENCKSEFSV 136
Query: 418 YNNRRRHM 425
N RH+
Sbjct: 137 QGNVGRHV 144
Score = 37.5 bits (83), Expect = 0.019
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 373 GEKRFKCDRCPKSFTQKTNLVFHLR-VHSATRPSYEC--PLCGKHFAFYNNRRRHMFIHT 429
GE + + + C +F++ +NL H++ VH RP + C P CG FA+ + R +H ++
Sbjct: 303 GEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRP-FVCGFPGCGMRFAYKHVRNKHE--NS 359
Query: 430 GLKPYKC 436
G Y C
Sbjct: 360 GYHVYTC 366
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 411 CGKHFAFYNNRRRHMFIHTGLKPYK--CDT--CLKCFTTSGELRAHVEHVH 457
CGK F + + ++H H L + C C+K FT L++H+ H
Sbjct: 222 CGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCH 272
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRV--HSATRPSYECPLCGKHFAFYNNRRRHM 425
R KC C + F +K +LV H+R+ HS P+ C +C KH +++ R H+
Sbjct: 5 RNKCGGCYRQFNKKEHLVEHMRISYHSVHEPT--CGICNKHCRSFDSLREHL 54
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 37.5 bits (83), Expect = 0.019
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 373 GEKRFKCDRCPKSFTQKTNLVFHLR-VHSATRPSYEC--PLCGKHFAFYNNRRRHMFIHT 429
GE + + + C +F++ +NL H++ VH RP + C P CG FA+ + R +H ++
Sbjct: 215 GEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRP-FVCGFPGCGMRFAYKHVRNKHE--NS 271
Query: 430 GLKPYKC 436
G Y C
Sbjct: 272 GYHVYTC 278
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 411 CGKHFAFYNNRRRHMFIHTGLKPYK--CDT--CLKCFTTSGELRAHVEHVH 457
CGK F + + ++H H L + C C+K FT L++H+ H
Sbjct: 134 CGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCH 184
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 37.1 bits (82), Expect = 0.025
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 19/96 (19%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRVHS------------ATRPSYEC--PLCGKH-----FA 416
RF CD C K F ++ NL H R H+ R Y C P C H
Sbjct: 82 RFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPSRALG 141
Query: 417 FYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAH 452
++H + G K +KC+ C K + + +AH
Sbjct: 142 DLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAH 177
Score = 32.3 bits (70), Expect = 0.72
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H + GEK++KC++C K + +++ H + + Y C CG F+
Sbjct: 146 IKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSK--TCGTKEYRCD-CGTIFS 195
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 37.1 bits (82), Expect = 0.025
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 19/96 (19%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRVHS------------ATRPSYECP--LCGKH-----FA 416
RF C+ C K F ++ NL H R H+ R Y CP C H
Sbjct: 81 RFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSCVHHDPARALG 140
Query: 417 FYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAH 452
++H + G K +KCD C K + + +AH
Sbjct: 141 DLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAH 176
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H + GEK++KCD+C K + +++ H + + Y C CG F+
Sbjct: 145 IKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSK--TCGTKEYRCD-CGTIFS 194
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 36.7 bits (81), Expect = 0.034
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 19/96 (19%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRVHS------------ATRPSYECP--LCGKH-----FA 416
RF C+ C K F ++ NL H R H+ R Y CP C H
Sbjct: 80 RFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSCVHHDPSRALG 139
Query: 417 FYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAH 452
++H + G K +KCD C K + + +AH
Sbjct: 140 DLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAH 175
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H + GEK++KCD+C K + +++ H + + Y C CG F+
Sbjct: 144 IKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSK--TCGTKEYRCD-CGTLFS 193
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 35.5 bits (78), Expect = 0.078
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRV--HSATRPSYECPLCGKHFAFYNNRRRHM 425
R KC C + F + +LV H+++ HS P+ C +C KH + + R H+
Sbjct: 14 RNKCAACYRQFNKLEHLVEHMKISYHSGHEPT--CGVCKKHCRSFESLREHL 63
Score = 34.7 bits (76), Expect = 0.14
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Query: 256 IEKRQELNSYKSAPYKCTTCYRGFLNRERGVAREHEKWHAGTKYQCPHCCSEFEAFPSKL 315
++ R + S ++ KC CYR F E V +H+G + C C +F S
Sbjct: 1 MDYRSSMESSETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLR 60
Query: 316 TTYMGHLRIKHVCDFVCELCGYTF 339
+G L K C + L G F
Sbjct: 61 EHLIGPLP-KQECKNIFSLRGCRF 83
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 34.7 bits (76), Expect = 0.14
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KCD+C K + +++ H ++ T+ Y+C CG F+
Sbjct: 126 IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKI-CGTK-EYKCD-CGTLFS 175
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 34.3 bits (75), Expect = 0.18
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 20/99 (20%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRVHS-------------ATRPSYECPL--CGKH-----F 415
RF C+ C K F + NL H R H+ + Y CP C H
Sbjct: 91 RFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRAL 150
Query: 416 AFYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAHVE 454
++H F G K +KC+ C K + + +AH +
Sbjct: 151 GDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAK 189
Score = 33.5 bits (73), Expect = 0.31
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H + GEK++KC++C K + +++ H + + Y+C CG F+
Sbjct: 156 IKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAK--TCGTKEYKCD-CGTLFS 205
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 33.9 bits (74), Expect = 0.24
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 19/96 (19%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRVHS------------ATRPSYECPLCG-------KHFA 416
RF C+ C K F + NL H R H+ + Y CP+ G +
Sbjct: 60 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALG 119
Query: 417 FYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAH 452
++H G K +KC+ C K + + +AH
Sbjct: 120 DLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAH 155
Score = 33.9 bits (74), Expect = 0.24
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRR 423
+K H GEK++KC++C K + +++ H ++ T+ Y+C CG F +RR
Sbjct: 124 IKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTK-EYKCD-CGTLF----SRRD 176
Query: 424 HMFIHTGLKPYKCDTCLKCFTTSGELRAHVEHVHMKKP 461
H + K T S +L + E V K P
Sbjct: 177 SFITHRAFCDALAEESAKNHTQSKKL--YPETVTRKNP 212
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 33.5 bits (73), Expect = 0.31
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KC++C K + +++ H ++ TR Y C CG F+
Sbjct: 146 IKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKI-CGTR-DYRCD-CGTLFS 195
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 33.5 bits (73), Expect = 0.31
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KCD+C K + +++ H + + Y C CG F+
Sbjct: 163 IKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSK--TCGTKEYRCD-CGTLFS 212
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 33.1 bits (72), Expect = 0.41
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KCD+C K + ++ H ++ T+ Y C CG F+
Sbjct: 132 IKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKI-CGTK-EYRCD-CGTLFS 181
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 32.7 bits (71), Expect = 0.55
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KC++C K + +++ H + TR Y+C CG F+
Sbjct: 146 IKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKT-CGTR-EYKCD-CGTLFS 195
>At4g16180.1 68417.m02456 expressed protein ; expression supported
by MPSS
Length = 313
Score = 32.3 bits (70), Expect = 0.72
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 30 KKVKNGAVPVTLVCRICLNIGGKL--YDMGACKLEEIYEQLTEYIFTDD 76
K VK VP + + G L YD+ A K+E + QL YIF D
Sbjct: 144 KAVKEAMVPAGTALEVAADFGRHLPAYDVEAIKVESAFNQLYSYIFDID 192
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 32.3 bits (70), Expect = 0.72
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KC++C K + +++ H + TR Y C CG F+
Sbjct: 133 IKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKT-CGTR-EYRCD-CGTIFS 182
>At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 137
Score = 31.9 bits (69), Expect = 0.96
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 378 KCDRCPKSFTQKTNLVFHLRVHSA-----TRPSYECPLCGKHFAFYNNRRRHMFIH 428
+C+R S + +T V H R S+ TR YEC C + F HM IH
Sbjct: 2 ECERSSSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIH 57
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 31.9 bits (69), Expect = 0.96
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 406 YECPLCGKHFAFYNNRRRHMFIH 428
+ CPLC K F YNN + HM+ H
Sbjct: 256 FSCPLCFKTFNRYNNMQMHMWGH 278
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 31.9 bits (69), Expect = 0.96
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 406 YECPLCGKHFAFYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELR 450
+ CPLC K F YNN + HM+ H G + K L+ +G LR
Sbjct: 178 FTCPLCFKTFNRYNNMQMHMWGH-GSQYRKGPESLRGTQPTGMLR 221
>At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 324
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 422 RRHMFIHTGLKPYKCDTCLKCFTTSGELRAHVEHVHMK 459
R H + PY C C F TS + AH+ +H K
Sbjct: 234 RTHSLPYEKYGPYTCPKCNSVFDTSQKFAAHISSMHYK 271
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 393 VFHLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLK 432
V LR + ++ S++C +CGK F Y H IH +K
Sbjct: 30 VIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIK 69
>At4g21030.1 68417.m03042 Dof-type zinc finger domain-containing
protein prolamin box binding factor, Zea mays,
PID:g2393775
Length = 194
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 9/50 (18%)
Query: 404 PSYECPLCGK---HFAFYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELR 450
P CP C F+++NN ++ YKC C +C+T G LR
Sbjct: 19 PPRVCPRCYSDQTRFSYFNNNKKSQ------PRYKCKNCCRCWTHGGVLR 62
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 406 YECPLCGKHFAFYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELR 450
+ CP+C K F YNN + HM+ H G + K L+ +G LR
Sbjct: 217 FSCPVCFKTFNRYNNMQMHMWGH-GSQYRKGPESLRGTQPTGMLR 260
Score = 29.1 bits (62), Expect = 6.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 430 GLKPYKCDTCLKCFTTSGELRAH 452
G+KP+ C C K F G+ R H
Sbjct: 297 GIKPFMCRKCGKAFAVRGDWRTH 319
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KCD+C K + ++ H ++ + + C CG F+
Sbjct: 70 IKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSR--EFRCD-CGTLFS 119
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 375 KRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGK 413
+R+KC C KSF L H+R H T + C + G+
Sbjct: 2 ERYKCRFCFKSFINGRALGGHMRSHMLTLSAERCVITGE 40
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 30.3 bits (65), Expect = 2.9
Identities = 23/76 (30%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 377 FKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLKPYKC 436
FKC C K FT L H HS E A + R + K +KC
Sbjct: 193 FKCSICEKVFTSYQALGGHKASHSIKAAQLE-----NAGADAGEKTRSKMLSPSGKIHKC 247
Query: 437 DTCLKCFTTSGELRAH 452
D C F T L H
Sbjct: 248 DICHVLFPTGQALGGH 263
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 30.3 bits (65), Expect = 2.9
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 370 VHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSA 401
+H G +F C C K+F + N+ H+ H +
Sbjct: 173 IHVGPMQFACSICSKTFNRYNNMQMHMWGHGS 204
Score = 28.7 bits (61), Expect = 8.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 406 YECPLCGKHFAFYNNRRRHMFIH 428
+ C +C K F YNN + HM+ H
Sbjct: 180 FACSICSKTFNRYNNMQMHMWGH 202
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++ C++C K + +++ H + TR Y C CG F+
Sbjct: 129 IKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKT-CGTR-EYRCD-CGTIFS 178
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 431 LKPYKCDTCLKCFTT----SGELRAHVEHVHMKKPWPKRARTNRQSD 473
++ YKC C K F G +R+H+ + H ++ P + +SD
Sbjct: 1 MESYKCRVCFKSFVNGKALGGHMRSHMSNSHEEEQRPSQLSYETESD 47
>At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 300
Score = 29.5 bits (63), Expect = 5.1
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 405 SYECPLCGKHFAFYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAHV 453
SY+ K A+ + R H +T PY C C F TS + AH+
Sbjct: 214 SYDSQEDEKIDAYQYDGRTHSLPYTKYGPYTCPRCNGVFDTSQKFAAHM 262
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 371 HTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
H+ K++ C+RC K + +++ HL+ TR + C CG+ F+
Sbjct: 139 HSNHKQWVCERCSKGYAVQSDYKAHLKT-CGTR-GHSCD-CGRVFS 181
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 29.1 bits (62), Expect = 6.8
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 371 HTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
H+ K++ C+RC K + +++ HL+ TR + C CG+ F+
Sbjct: 142 HSNHKQWICERCSKGYAVQSDYKAHLKT-CGTR-GHSCD-CGRVFS 184
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 29.1 bits (62), Expect = 6.8
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 395 HLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAHVE 454
H R + + C C K +A ++ + H+ G + + CD C + F+ H +
Sbjct: 107 HFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKT-CGSRGHSCD-CGRVFSRVESFIEHQD 164
Query: 455 HVHMKKPWPKRARTNRQ 471
+++P P R +Q
Sbjct: 165 TCTIRQPQPTNHRHLQQ 181
>At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 191
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 374 EKRFKCDRCPKSFTQKTNLVFHLRVHSATR-PSYECPLCGKHFAFYNNRRRHM 425
EKRFKC C ++F L H H R + L AF++ ++ H+
Sbjct: 52 EKRFKCHYCFRNFPTSQALGGHQNAHKRERQQTKRFNLHSNAAAFFHRQQNHI 104
>At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 230
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 393 VFHLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLK 432
V LR ++ S+ C +CGK F Y H +H +K
Sbjct: 78 VVALRSKLQSKSSHRCQICGKSFECYQALGGHRRLHRPIK 117
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.136 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,176,199
Number of Sequences: 28952
Number of extensions: 454733
Number of successful extensions: 1294
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1168
Number of HSP's gapped (non-prelim): 129
length of query: 477
length of database: 12,070,560
effective HSP length: 84
effective length of query: 393
effective length of database: 9,638,592
effective search space: 3787966656
effective search space used: 3787966656
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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