Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001743-TA|BGIBMGA001743-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type, IPR006612|Zinc finger,
C2CH-type
(477 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 70 8e-13
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 64 5e-11
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 55 3e-08
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 50 5e-07
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 50 7e-07
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 48 4e-06
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 45 2e-05
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 42 1e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 42 2e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 38 0.004
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 37 0.005
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 36 0.012
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 36 0.012
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 31 0.35
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 29 1.4
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 69.7 bits (163), Expect = 8e-13
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 10/110 (9%)
Query: 362 ALLKDHMWVHTGEKRFKCDR--CPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYN 419
+LL+ H+ H+ E+ F CD C K+F +K++L H R H+ +P + C G FY
Sbjct: 38 SLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKP-FSCHYDGCDAQFYT 96
Query: 420 NR--RRHMFIHTGLKPYKC--DTCLKCFTTSGELRAHVE--HVHMKKPWP 463
+ RH+ +H KPY C + C +CF+ +LR+H+ H H+ P+P
Sbjct: 97 QQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHL-LPYP 145
Score = 54.0 bits (124), Expect = 4e-08
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 370 VHTGEKRFKC--DRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFY--NNRRRHM 425
+ + +K F C + C K +++ + L HLR HS RP + C G AFY ++ + H
Sbjct: 16 LRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERP-FVCDYTGCSKAFYRKSHLKIHK 74
Query: 426 FIHTGLKPYKC--DTCLKCFTTSGELRAHVEHVHMK-KPW 462
HT +KP+ C D C F T L H+E VH K KP+
Sbjct: 75 RCHTNVKPFSCHYDGCDAQFYTQQHLERHIE-VHRKPKPY 113
Score = 50.8 bits (116), Expect = 4e-07
Identities = 58/196 (29%), Positives = 83/196 (42%), Gaps = 43/196 (21%)
Query: 258 KRQELNSYKSA------PYKCT--TCYRGFLNRER---GVAREHEKWHAGTKYQCPH-CC 305
K Q+L S+ SA PY CT C F +++ V R HEK Y CPH C
Sbjct: 126 KHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKI---ISYSCPHESC 182
Query: 306 SEFEAFPSKLTTYMGHLRIKHVCDFVCELCGYTFVSXXXXXXXXXXXHRLADKPSMALLK 365
E F K + H+R HV C +CG F + A L+
Sbjct: 183 VGHEGF-EKWSQLQNHIREAHVPS--CSICGRQFKTA-------------------AHLR 220
Query: 366 DHMWVH--TGEKR--FKC--DRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYN 419
H+ +H T E+R + C + C KSFT+ + L H+ V ++ C CG F + +
Sbjct: 221 HHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKH 280
Query: 420 NRRRHMFIHTGLKPYK 435
+RH+ T K +K
Sbjct: 281 MLQRHLERGTCKKAHK 296
Score = 45.2 bits (102), Expect = 2e-05
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 379 CDRCPKSFTQKTNLVFHLRVHSAT---RPSYECPL--CGKHFAFYNNRRRHM-FIHTGLK 432
C C + F +L H+ +H T R +Y CP+ C K F + ++H+ IH G
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 433 PYKCDTCLKCFTTSGELRAHVEHVHMKK 460
+ CD+C F L+ H+E KK
Sbjct: 266 AFHCDSCGTKFGYKHMLQRHLERGTCKK 293
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 63.7 bits (148), Expect = 5e-11
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 382 CPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLKPYKCDTCLK 441
C K FT+ NL H+ H+ RP ++C +C K FA +++RRH +HTG+K + C TC +
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRP-FQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQ 635
Query: 442 CFTTSGELRAH 452
F L H
Sbjct: 636 RFARMDALNRH 646
Score = 44.0 bits (99), Expect = 5e-05
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRR 423
LK HM HT + F+C C KSF ++ + H ++H+ + ++ C C + FA + R
Sbjct: 587 LKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIK-AFACVTCNQRFARMDALNR 645
Query: 424 H 424
H
Sbjct: 646 H 646
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 54.8 bits (126), Expect = 3e-08
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 382 CPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLKPYKCDTCLK 441
C K +K N+ H++ H + RP Y C LC F +++ +RH+ IH +PY C+ CLK
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRP-YRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLK 507
Query: 442 CFTTSGELRAH 452
F L H
Sbjct: 508 RFNRLDALNRH 518
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRR 423
++ H+ H ++ ++CD C F + +L HLR+H RP Y C C K F + R
Sbjct: 460 VESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRP-YVCE-CLKRFNRLDALNR 517
Query: 424 H 424
H
Sbjct: 518 H 518
Score = 34.3 bits (75), Expect = 0.038
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 411 CGKHFAFYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAHVEHVHMKKPW 462
C K A N H+ H +PY+CD C F +L+ H+ +P+
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPY 501
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 50.4 bits (115), Expect = 5e-07
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 405 SYECPLCGKHFAFYNNRRRHMFIHTGLKPYKCD--TCLKCFTTSGELRAHVEHVHMKK 460
SYECP C + F ++ RH+ HTG KP++C +C K FT EL HV H++K
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHV-RTHLRK 59
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 367 HMWVHTGEKRFKCD--RCPKSFTQKTNLVFHLRVH 399
H+ HTGEK F+C C K FT++ L+ H+R H
Sbjct: 22 HIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 36.7 bits (81), Expect = 0.007
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 375 KRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYEC--PLCGKHFAFYNNRRRHMFIH 428
K ++C C + F ++ + V H+R H+ +P +EC P C K F + RH+ H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKP-FECSYPSCKKRFTRRDELIRHVRTH 56
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 50.0 bits (114), Expect = 7e-07
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 384 KSFTQKTNLVFHLRVHSATRPSYEC--PLCGKHFAFYNNRRRHMFIHTGLKPYKCDTCLK 441
+SFT+K L R H P + C P C K F + RRH H +K + C C +
Sbjct: 5 ESFTEKP-LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNR 63
Query: 442 CFTTSGELRAHVEHVHMKK 460
F S L HV+ +H++K
Sbjct: 64 AFARSDVLNRHVQQMHLQK 82
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 373 GEKRFKCDR--CPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRRHM 425
G+ RF C CPKSFT+K +L H R H + ++ C C + FA + RH+
Sbjct: 22 GDPRFYCTYPDCPKSFTRKEHLRRHERTHENVK-AFSCSFCNRAFARSDVLNRHV 75
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 47.6 bits (108), Expect = 4e-06
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 401 ATRPSYECPLCGKHFAFYNNRRRHMFIHTGLKPYKC--DTCLKCFTTSGELRAH 452
A RP Y+CPLC K F ++ RH+ HTG KP+ C C K F+ S EL H
Sbjct: 22 APRP-YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 377 FKCDRCPKSFTQKTNLVFHLRVHSATRPSYEC--PLCGKHFAFYNNRRRHMFIHT 429
+KC C K+F + + H+R H+ +P + C P C K F+ + RH IHT
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKP-HVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 259 RQELNSYKSAPYKCTTCYRGFLNRERGVAREHEKWHAGTKYQCPHCCS 306
R N PYKC C + F E H + H G K PH C+
Sbjct: 15 RSTKNPDAPRPYKCPLCTKAFYRLEH--QTRHIRTHTGEK---PHVCT 57
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 45.2 bits (102), Expect = 2e-05
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 373 GEKRFKCDRCPKSFTQKTNLVFHLR-VHSATRPSYECPLCGKHFAFYNNRRRHMFIHTGL 431
G K F C C K F + +L H+R +H++ +P + C +CGK F+ +N R+H +H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKP-FVC-ICGKRFSRRDNLRQHERLHVNA 476
Query: 432 KP 433
P
Sbjct: 477 SP 478
Score = 33.1 bits (72), Expect = 0.087
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 370 VHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYEC 408
+HT EK F C C K F+++ NL H R+H P C
Sbjct: 445 LHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNASPRLAC 482
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 419 NNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAHVEHVH-MKKPW 462
+NR+ + G K + C C K F S LR H+ +H +KP+
Sbjct: 408 SNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPF 452
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 42.3 bits (95), Expect = 1e-04
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPL--CGKHFAFYNNRRRHMFIH 428
R++C C + F++ ++L H H+ RP + C CGK F +N RRH IH
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSHTGERP-FVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 400 SATRPSYECPLCGKHFAFYNNRRRHMFIHTGLKPYKCD--TCLKCFTTSGELRAHVEHVH 457
SA Y C C + F+ ++ + H + HTG +P+ CD C K F +R H + +H
Sbjct: 462 SAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRH-QRIH 520
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 364 LKDHMWVHTGEKRFKCD--RCPKSFTQKTNLVFHLRVH 399
LK H + HTGE+ F CD C K+F ++N+ H R+H
Sbjct: 483 LKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 406 YECPL--CGKHFAFYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAHVEHVHMKK 460
Y+C C K F + RRH HT K + C C FT S L HV H+K+
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQ 73
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 373 GEKRFKCD--RCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRRHM 425
G+ R+KCD C KSFT+K + H R H+ ++ ++ CP C F + RH+
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSK-AFICPHCSSSFTRSDVLNRHV 66
Score = 33.1 bits (72), Expect = 0.087
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 270 YKCTT--CYRGFLNRERGVAREHEKWHAGTK-YQCPHCCSEFEAFPSKLTTYMGHLRIKH 326
YKC C + F +E AR H + H +K + CPHC S F ++ H+ KH
Sbjct: 17 YKCDFQGCTKSFTRKEH--ARRHFRSHTNSKAFICPHCSSSF----TRSDVLNRHVNQKH 70
Query: 327 V 327
V
Sbjct: 71 V 71
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 367 HMWVHTGEKRFKCDRCPKSFTQKTNLVFHL 396
H HT K F C C SFT+ L H+
Sbjct: 37 HFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 37.5 bits (83), Expect = 0.004
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 377 FKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLC 411
F CD+C K FT+ NL H HS P CP C
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEP-IPCPYC 64
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 406 YECPLCGKHFAFYNNRRRHMFIHTGLKPYKCDTC-LKCFTTSGELRAHVEHVHMKK 460
+ C C K F + N RH H+ +P C C +KC L+ H++ H K
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKC-KRKDLLKRHIQRFHNDK 85
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 37.1 bits (82), Expect = 0.005
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Query: 406 YECPLCGKHFAFYNNRRRHMFIHTGLKPYKCDT-------CLKCFTTSGELRAHVEHVHM 458
Y C C + FA + +RH+ HT KP+ C C + F+ L H + +H
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIH- 128
Query: 459 KKPWPKRAR 467
+ P P+R R
Sbjct: 129 RNPQPRRRR 137
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 431 LKPYKCDTCLKCFTTSGELRAHVEHVHMKKPW 462
+K Y C+TC + F L+ H+ +KP+
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPF 98
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 35.9 bits (79), Expect = 0.012
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 367 HMWVHTGEKRFKCD--RCPKSFTQKTNLVFHLR-VHSA--TRPSYECP 409
H+ HTGEK F C C +SFT+ L H+R VH A RPS P
Sbjct: 96 HLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEADTLRPSDPIP 143
Score = 31.5 bits (68), Expect = 0.27
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 424 HMFIHTGLKPYKCDT--CLKCFTTSGELRAHVEHVH 457
H+ HTG KP+ C C + FT S L H+ VH
Sbjct: 96 HLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 371 HTGEKR--FKC--DRCPKSFTQKTN---LVFHLRVHSATRPSY-ECPLCGKHFAFYNNRR 422
H G +R + C D CP+ +T+ LV HLR H+ +P P C + F +
Sbjct: 65 HIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALA 124
Query: 423 RHM 425
+HM
Sbjct: 125 KHM 127
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 35.9 bits (79), Expect = 0.012
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 372 TGEKRFKCDRCPKSFTQKTNLVFHL-RVHSATRPSYECPLCG--KHFAFYNNRRRHMFIH 428
T + R + C F++ +L+ H +H+ TRP + C +CG +HF+ ++ RH+ +
Sbjct: 575 TLQNRVTGEICNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVK 634
Query: 429 TG 430
G
Sbjct: 635 HG 636
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 31.1 bits (67), Expect = 0.35
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 14/89 (15%)
Query: 374 EKRFKCD--RCPKSFTQKTNLVFHLRVHSATRP-SYECPLCGKHFAFYNNRRRHMFIHTG 430
+K +KC C K++ + L +H ++H P + P H F
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYH-KLHGHCSPITTPTPAPIPHQGFVVEN--------- 396
Query: 431 LKPYKCDTCLKCFTTSGELRAHVEHVHMK 459
KPY+C+ C K + L+ H H H++
Sbjct: 397 -KPYRCEVCSKRYKNLNGLKYHRTHSHLQ 424
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 89 HRLSSCLKFKRKALSSQKLLADLIAANKYVTLKDVLCVNRVENGLRSTLVRK 140
HR ++ L + QK++AD I Y + ++ +N +EN + S + K
Sbjct: 803 HRTNNVLMDSGRGKLLQKMVADAITEEGYDDFETIVTINHLENKIASARLLK 854
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.136 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,144,337
Number of Sequences: 5004
Number of extensions: 86093
Number of successful extensions: 243
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 182
Number of HSP's gapped (non-prelim): 43
length of query: 477
length of database: 2,362,478
effective HSP length: 75
effective length of query: 402
effective length of database: 1,987,178
effective search space: 798845556
effective search space used: 798845556
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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