Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001743-TA|BGIBMGA001743-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type, IPR006612|Zinc finger,
C2CH-type
(477 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 51 2e-06
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 51 2e-06
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 50 4e-06
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 45 1e-04
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 44 3e-04
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 41 0.002
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 40 0.004
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 39 0.008
01_05_0421 + 21990034-21990392,21991691-21992681 36 0.053
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 36 0.071
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 36 0.093
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 35 0.12
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 35 0.12
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 35 0.12
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 35 0.16
01_01_0990 + 7847066-7847478,7847713-7848679 34 0.22
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 33 0.38
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 33 0.50
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 33 0.50
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 33 0.66
09_04_0241 + 15962439-15962795,15962809-15963102 32 1.1
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 31 2.0
09_02_0226 - 6007656-6008063,6012166-6012678 31 2.0
09_04_0564 + 18565583-18566449,18569662-18570123 31 2.7
08_02_1172 + 24898290-24899141,24900864-24901328 31 2.7
06_03_0743 + 24069752-24070483,24071890-24072345 31 2.7
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 31 2.7
10_07_0059 + 12475452-12475785,12475889-12476523 30 3.5
07_03_1151 + 24385272-24386543 30 3.5
04_01_0477 - 6221990-6223224,6227722-6228817 30 3.5
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 30 4.6
03_02_0928 + 12464325-12464498,12466494-12466679,12466929-124670... 30 4.6
01_03_0284 - 14595643-14595663,14595978-14596018,14596379-145967... 30 4.6
09_06_0349 + 22457820-22457987,22458202-22458246,22458597-224586... 29 6.1
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 29 6.1
02_04_0316 - 21978330-21979397 29 6.1
01_06_1412 - 37140654-37141088,37141549-37142214 29 6.1
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 29 8.1
02_05_1277 - 35408097-35409080 29 8.1
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 50.8 bits (116), Expect = 2e-06
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 364 LKDHMWVHTGEKRFKC--DRCPKSFTQKTNLVFHLRVHSATRPSYEC--PLCGKHFAFYN 419
LK H VH E+ FKC D CP +F H+RVH+ RP Y+C P CG+ F + +
Sbjct: 834 LKRHQCVHRDERPFKCPWDGCPMTFKWLWAQTEHIRVHTGERP-YKCSAPDCGQSFRYVS 892
Query: 420 NRRRH 424
+ RH
Sbjct: 893 DYSRH 897
Score = 39.9 bits (89), Expect = 0.004
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 380 DRCPKSFTQKTNLVFHLRVHSATRPSYECPL--CGKHFAFYNNRRRHMFIHTGLKPYKC 436
+ C K F+ L H VH RP ++CP C F + + H+ +HTG +PYKC
Sbjct: 822 ESCGKRFSSHKYLKRHQCVHRDERP-FKCPWDGCPMTFKWLWAQTEHIRVHTGERPYKC 879
Score = 36.7 bits (81), Expect = 0.040
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 377 FKCDR--CPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLKPY 434
F+CD C +F K L H R + T S CGK F+ + +RH +H +P+
Sbjct: 794 FQCDIEFCDMTFETKAELRAHQR-NICTDES-----CGKRFSSHKYLKRHQCVHRDERPF 847
Query: 435 KCDTCLKCFTTSGELRAHVEHVHM 458
KC C T L A EH+ +
Sbjct: 848 KCPWD-GCPMTFKWLWAQTEHIRV 870
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 50.8 bits (116), Expect = 2e-06
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 14/124 (11%)
Query: 364 LKDHMWVHTGEKRFKCDR--CPKSFTQKTNLVFHLRVHSATRPSYECPL--CGKHFAFYN 419
L+ H VH GE+++ C C K F + L H +H+ + ++ CP CGK AF
Sbjct: 60 LRKHAHVH-GERQYVCHYAGCDKKFLDSSKLKRHFLIHTGEK-NFVCPHEGCGKVLAFSL 117
Query: 420 --NRRRHMFIHTGLKPYKCD--TCLKCFTTSGELRAHVEHVHMKKPW--PKRARTNRQSD 473
N + HM H+ + C C + FT +LRAH++ H K P + TNR
Sbjct: 118 DFNLKAHMKTHSVDNYHVCKYPECARRFTQESKLRAHIKQQHEKGGLQNPGGSATNR--S 175
Query: 474 ALAD 477
LAD
Sbjct: 176 GLAD 179
Score = 40.3 bits (90), Expect = 0.003
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 372 TGEKRFKC--DRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHT 429
T E F C + C K+F L H VH + C K F + +RH IHT
Sbjct: 38 TTEVLFLCSYEGCGKTFVDAGALRKHAHVHGERQYVCHYAGCDKKFLDSSKLKRHFLIHT 97
Query: 430 GLKPYKC--DTCLK--CFTTSGELRAH-----VEHVHMKKPWPKRARTNRQSDAL 475
G K + C + C K F+ L+AH V++ H+ K +P+ AR Q L
Sbjct: 98 GEKNFVCPHEGCGKVLAFSLDFNLKAHMKTHSVDNYHVCK-YPECARRFTQESKL 151
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 50.0 bits (114), Expect = 4e-06
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 372 TGEKRFKC--DRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHT 429
T E F C + C K+F L H VH+ + + P CGK F + +RH IHT
Sbjct: 82 TTEILFLCSYENCGKTFVDVAALRKHAHVHNERQYICQEPGCGKKFVDSSKLKRHHLIHT 141
Query: 430 GLKPYKC--DTCLKCFTTSGELRAHVE 454
G K + C C K F+ LR+H++
Sbjct: 142 GQKDFICPHPGCGKAFSLDFNLRSHLK 168
Score = 44.4 bits (100), Expect = 2e-04
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 364 LKDHMWVHTGEKRFKCDR--CPKSFTQKTNLVFHLRVHSATRPSYECPL--CGKHFAFYN 419
LK H +HTG+K F C C K+F+ NL HL+ H A + CP CGK F +
Sbjct: 133 LKRHHLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTH-ALENYHVCPFPACGKRFTSDS 191
Query: 420 NRRRHMFIH 428
+ H+ H
Sbjct: 192 KLKSHVKGH 200
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 45.2 bits (102), Expect = 1e-04
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 375 KRFKC--DRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLK 432
KRF+C D C +F + L H + ++ T S CG+HF + RRH IH
Sbjct: 538 KRFQCEIDYCRMTFKNRAELSVHKK-NTCTVKS-----CGRHFRSHKYLRRHQSIHNDDM 591
Query: 433 PYKC--DTCLKCFTTSGELRAHVEHVHMKKPW 462
PYKC + C F S + H + K+P+
Sbjct: 592 PYKCPWEGCSMAFKWSWDRGEHFQVHAGKRPY 623
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 382 CPKSFTQKTNLVFHLRVHSATRPSYECPL--CGKHFAFYNNRRRHMFIHTGLKPYKCDT- 438
C + F L H +H+ P Y+CP C F + +R H +H G +PYKC T
Sbjct: 570 CGRHFRSHKYLRRHQSIHNDDMP-YKCPWEGCSMAFKWSWDRGEHFQVHAGKRPYKCTTP 628
Query: 439 -CLKCFTTSGELRAH 452
C K + + H
Sbjct: 629 GCSKIYKFVSDFTRH 643
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 44.0 bits (99), Expect = 3e-04
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 362 ALLKDHMWVHTGEKRFKC--DRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYN 419
A LK HM H+ E+ F C + CP S+ +K +L H+ H + CG+ F+
Sbjct: 73 AHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKHQGKLFTCSMDGCGRKFSIKA 132
Query: 420 NRRRHM-FIH---TGLK---PYKC--DTCLKCFTTSGELRAHVEHVHMK 459
N +RH+ IH T K + C + C K F + +++ H E H+K
Sbjct: 133 NMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKH-EESHVK 180
Score = 39.1 bits (87), Expect = 0.008
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 26/160 (16%)
Query: 323 RIKHVCDFVCELCGYTFV--SXXXXXXXXXXXHR-----LADKPSMALLKDH----MWVH 371
++ H D C+ CG +F + R L D P + KDH M H
Sbjct: 53 KVVHEGDHTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKH 112
Query: 372 TGEKRFKC--DRCPKSFTQKTNLVFHLR-VH---SATRPS--YECPL--CGKHFAFYNNR 421
G K F C D C + F+ K N+ H++ +H +AT+ + + C C K F + +
Sbjct: 113 QG-KLFTCSMDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKM 171
Query: 422 RRHMFIHTGLKPYK---CDT-CLKCFTTSGELRAHVEHVH 457
++H H L + C+ C+K FT LRAH + H
Sbjct: 172 KKHEESHVKLDYVEVVCCEPGCMKTFTNVECLRAHNQACH 211
Score = 32.7 bits (71), Expect = 0.66
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 21/164 (12%)
Query: 281 NRERGVAREHEKWHA---GTKYQCPH-CCSEFEAFPSKLTTYM-GHLRIKHVCDFVCEL- 334
N +R V HE A ++ C C++ + SK+ + H+++ +V CE
Sbjct: 133 NMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEESHVKLDYVEVVCCEPG 192
Query: 335 CGYTFVSXXXXXXXXXXXHRLA------DKPSMALLKDHMWVHT---GEKRFKC--DRCP 383
C TF + H+ +K +K H+ H +R KC + C
Sbjct: 193 CMKTFTNVECLRAHNQACHQYVQCDICGEKHLKKNIKRHLRAHEEVPSTERIKCSFEGCE 252
Query: 384 KSFTQKTNLVFHLRV-HSATRPSYECPL--CGKHFAFYNNRRRH 424
SF+ K+NL H++ H +P + C C K F + + R H
Sbjct: 253 CSFSNKSNLTKHIKASHDQVKP-FACRFTGCEKVFPYKHVRDNH 295
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 382 CPKSFTQKTNLVFHLRVHSATRPSYECPL--CGKHFAFYNNRRRHMFIHTGLKPYKC 436
C K F L+ H +VH RP +C C K F + R HM +HTG++PY+C
Sbjct: 1260 CKKKFFCHKYLLQHRKVHIDERP-LKCTWKGCKKAFKWPWARTEHMRVHTGVRPYEC 1315
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 39.9 bits (89), Expect = 0.004
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 382 CPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNN--RRRHMFIHTGLKPYKCDT- 438
C K F L+ H +VH+ RP CP G + AF R H+ +HTG +PY C
Sbjct: 1116 CGKKFFSHKYLLQHRKVHTDDRP-LTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVCHEP 1174
Query: 439 -CLKCFTTSGELRAH 452
C + F + H
Sbjct: 1175 GCAQTFRFVSDFSRH 1189
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 39.1 bits (87), Expect = 0.008
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 364 LKDHMWVHTGEKRFKC--DRCPKSFTQKTNLVFHLR-VHSATRP-----SYECPL--CGK 413
L H+ H G K F C + C + FT K N+ H++ +H P + CP CGK
Sbjct: 304 LNRHLLTHQG-KLFACPMEGCNRKFTIKGNIQRHVQEMHKDGSPCESKKEFICPEENCGK 362
Query: 414 HFAFYNNRRRHMFIHTGLKPYK---CDT-CLKCFTTSGELRAHVEHVH 457
F + + ++H H L + C+ C+K FT L+AH + H
Sbjct: 363 TFKYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLECLKAHNKSCH 410
Score = 37.1 bits (82), Expect = 0.031
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 370 VHTGEKR-FKC--DRCPKSFTQKTNLVFHLRVHSATRPSYECPL--CGKHFAFYNNRRRH 424
VHT +R F C D CP S+++K +L HL H + CP+ C + F N +RH
Sbjct: 279 VHTLFQRPFSCHVDGCPFSYSRKDHLNRHLLTHQG--KLFACPMEGCNRKFTIKGNIQRH 336
Query: 425 M-FIH------TGLKPYKC--DTCLKCFTTSGELRAHVEHVHMK 459
+ +H K + C + C K F + +L+ H E H+K
Sbjct: 337 VQEMHKDGSPCESKKEFICPEENCGKTFKYASKLQKH-EESHVK 379
Score = 35.1 bits (77), Expect = 0.12
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 365 KDHMWVHTGE---KRFKCDR--CPKSFTQKTNLVFHLR-VHSATRPSYECPL--CGKHFA 416
K H +H G +R +C C SF++K+NL H++ VH RP + C CGK F+
Sbjct: 428 KRHQRMHEGSCVTERVRCHLKDCKLSFSKKSNLDKHVKAVHEQKRP-FVCGFSGCGKSFS 486
Query: 417 FYNNRRRH 424
+ + R H
Sbjct: 487 YKHVRDNH 494
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 36.3 bits (80), Expect = 0.053
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H + GEK++KCD+C K + ++ H ++ TR Y+C CG F+
Sbjct: 70 IKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKI-CGTR-EYKCD-CGTIFS 119
Score = 35.9 bits (79), Expect = 0.071
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 20/97 (20%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRVHS------------ATRPS-YECP--LCGKH-----F 415
RF C+ C K F + NL H R H+ A R Y CP C H
Sbjct: 5 RFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAVRKKVYICPEASCVHHDPSRAL 64
Query: 416 AFYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAH 452
++H F G K +KCD C K + + +AH
Sbjct: 65 GDLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAH 101
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 35.9 bits (79), Expect = 0.071
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KCDRC K + ++ H +V TR Y+C CG F+
Sbjct: 151 IKKHFCRKHGEKKWKCDRCGKRYAVHSDWKAHSKV-CGTR-EYKCD-CGTVFS 200
Score = 30.7 bits (66), Expect = 2.7
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 406 YECPLCGKHFAFYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAH 452
++C CGK +A +++ + H + G + YKCD C F+ H
Sbjct: 164 WKCDRCGKRYAVHSDWKAHSKV-CGTREYKCD-CGTVFSRRDSFVTH 208
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 35.5 bits (78), Expect = 0.093
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 19/98 (19%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRVHS------------ATRPSYECP--LCGKHFAF---- 417
R+ C+ C K F + NL H R H+ A + Y CP C H A
Sbjct: 65 RYICEVCHKGFQRDQNLQLHRRGHNLPWKLKQRSSTEAKKKVYVCPEITCPHHDATRALG 124
Query: 418 -YNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAHVE 454
++H G K +KCD C K + + +AH +
Sbjct: 125 DLTGIKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTK 162
Score = 35.1 bits (77), Expect = 0.12
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KCDRC K + +++ H ++ T+ Y C CG F+
Sbjct: 129 IKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTKI-CGTK-EYRCD-CGTIFS 178
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 35.1 bits (77), Expect = 0.12
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 19/96 (19%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRVHS------------ATRPSYEC--PLCGKH-----FA 416
RF C+ C K F ++ NL H R H+ A R Y C P C H
Sbjct: 47 RFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEARRRVYLCPEPSCVHHDPSRALG 106
Query: 417 FYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAH 452
++H G K ++CD C K + + +AH
Sbjct: 107 DLTGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAH 142
Score = 32.3 bits (70), Expect = 0.87
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK+++CD+C K + +++ H + TR Y C CG F+
Sbjct: 111 IKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSKT-CGTR-EYRCD-CGTLFS 160
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 35.1 bits (77), Expect = 0.12
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KCD+C K + +++ H ++ TR Y C CG F+
Sbjct: 107 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI-CGTR-EYRCD-CGTLFS 156
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 35.1 bits (77), Expect = 0.12
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KCD+C K + +++ H ++ TR Y C CG F+
Sbjct: 159 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI-CGTR-EYRCD-CGTLFS 208
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 34.7 bits (76), Expect = 0.16
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRR 423
+K H GEK++KCD+C K + ++ H +V TR Y C CG F +RR
Sbjct: 138 IKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAHSKV-CGTR-EYRCD-CGTLF----SRRD 190
Query: 424 HMFIHTGLKPYKCDTCLKCFTTSGELRAHVEH 455
H + + T + + +H
Sbjct: 191 SFITHRAFCDALAEESARAVTAAAAVAGQQQH 222
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 34.3 bits (75), Expect = 0.22
Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 19/96 (19%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRVH---------SATRPS---YECP--LCGKH-----FA 416
RF C+ C K F + NL H R H S P Y CP C H
Sbjct: 24 RFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPRKRVYVCPEKSCVHHNPSRALG 83
Query: 417 FYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAH 452
++H G K +KCD C K + + +AH
Sbjct: 84 DLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAH 119
Score = 33.9 bits (74), Expect = 0.28
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KCD+C K + +++ H + TR Y C CG F+
Sbjct: 88 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTR-EYRCD-CGTLFS 137
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 33.5 bits (73), Expect = 0.38
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEK++KCD+C K + +++ H + + Y C CG F+
Sbjct: 111 IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGSR--EYRCD-CGTLFS 160
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 33.1 bits (72), Expect = 0.50
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHF 415
+K H GEKR+ C RC K + + +L H + TR Y C CG F
Sbjct: 124 IKKHFCRKHGEKRWTCQRCGKRYAVQADLKAHTKT-CGTR-EYRCD-CGTLF 172
Score = 30.7 bits (66), Expect = 2.7
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 21/100 (21%)
Query: 376 RFKCDRCPKSFTQKTNLVFHLRVHS-----------ATRPSYECPLCGKHFAFYNNRRRH 424
RF C+ C K F + NL H R H+ A P +C + ++N R
Sbjct: 58 RFVCEVCGKGFQRDQNLQLHRRGHNLPWRLRQRGPGAAPPRRRVYVCPEPGCVHHNPTRA 117
Query: 425 MFIHTGLKPYKCD-------TCLKC---FTTSGELRAHVE 454
+ TG+K + C TC +C + +L+AH +
Sbjct: 118 LGDLTGIKKHFCRKHGEKRWTCQRCGKRYAVQADLKAHTK 157
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 33.1 bits (72), Expect = 0.50
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Query: 373 GEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLK 432
GE+ + PK+ K L + +A R CP CGK F H+ H L+
Sbjct: 155 GEEPAAAELAPKAVRSKKKLAVEAQGGAAVRDDLTCPECGKVFMSDKAMYGHLRSHP-LR 213
Query: 433 PYKCDTCLKCFTTSGELRAHVEHVHMKKPWPKRARTNRQSD 473
+K L + A V +PW K RT +++
Sbjct: 214 KHKGAARLAAVAAAAADDASVAAGVKPRPW-KVPRTKEEAE 253
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 32.7 bits (71), Expect = 0.66
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 364 LKDHMWVHTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
+K H GEKR++C+RC K + ++ H++ + TR Y C CG F+
Sbjct: 111 IKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHVK-NCGTR-EYRCD-CGILFS 160
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 397 RVHSATRPSYECPLCGKHFAFYNNRRRHMFIHTGLKPYKCDTCLKCFTTSGELRAH 452
R H R + C CGK +A +++ + H+ + G + Y+CD C F+ L H
Sbjct: 117 RKHGEKR--WRCERCGKRYAVHSDWKAHV-KNCGTREYRCD-CGILFSRKDSLLTH 168
>09_04_0241 + 15962439-15962795,15962809-15963102
Length = 216
Score = 31.9 bits (69), Expect = 1.1
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1 MKGWLPKDGSAICSEHFWKDDF 22
MKGW+ +G + H+W++D+
Sbjct: 182 MKGWIQPEGGEVSCPHYWREDY 203
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 31.1 bits (67), Expect = 2.0
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 379 CDRCPKSFTQKTNLVFHLRVHSAT--RP-SYECP--LCGKHFAFYNNRRRHMFIHTGLKP 433
C++C KSF L H+ H + +P S P + H ++ ++ + L P
Sbjct: 120 CNKCDKSFRSGNALGGHMSCHRSVGNQPKSTSSPPTVVDLHMPLLSSCDDNLLL---LPP 176
Query: 434 Y-KCDTCLKCFTTSGELRAHV 453
+C C K F+TSG LR H+
Sbjct: 177 ETQCQMCSKVFSTSGSLREHM 197
Score = 29.5 bits (63), Expect = 6.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 404 PSYECPLCGKHFAFYNNRRRHMFIHTGLK 432
P +C +C K F+ + R HM +H G K
Sbjct: 176 PETQCQMCSKVFSTSGSLREHMMMHGGEK 204
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 31.1 bits (67), Expect = 2.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 406 YECPLCGKHFAFYNNRRRHMFIH 428
+ CP+C K F+ YNN + HM+ H
Sbjct: 155 FACPVCCKTFSRYNNLQMHMWGH 177
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 406 YECPLCGKHFAFYNNRRRHMFIH 428
+ CP+C K F YNN + HM+ H
Sbjct: 273 FSCPVCFKTFNRYNNMQMHMWGH 295
Score = 29.9 bits (64), Expect = 4.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 430 GLKPYKCDTCLKCFTTSGELRAH 452
GLKP+ C C K F G+ R H
Sbjct: 353 GLKPFLCRKCGKAFAVKGDWRTH 375
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 406 YECPLCGKHFAFYNNRRRHMFIH 428
+ CP+C K F YNN + HM+ H
Sbjct: 268 FSCPVCFKTFNRYNNMQMHMWGH 290
Score = 29.9 bits (64), Expect = 4.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 430 GLKPYKCDTCLKCFTTSGELRAH 452
GLKP+ C C K F G+ R H
Sbjct: 348 GLKPFLCRKCGKAFAVKGDWRTH 370
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 406 YECPLCGKHFAFYNNRRRHMFIH 428
+ CP+C K F YNN + HM+ H
Sbjct: 228 FSCPVCYKTFNRYNNMQMHMWGH 250
Score = 29.1 bits (62), Expect = 8.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 430 GLKPYKCDTCLKCFTTSGELRAH 452
G+KP+ C C K F G+ R H
Sbjct: 308 GIKPFMCRKCGKAFAVRGDWRTH 330
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 406 YECPLCGKHFAFYNNRRRHMFIH 428
+ CP+C K F YNN + HM+ H
Sbjct: 163 FSCPVCRKTFNRYNNLQMHMWGH 185
>10_07_0059 + 12475452-12475785,12475889-12476523
Length = 322
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 190 IKDEASNEIFFEEYNVGFYDSDDDKVLSEVYKDEKVANCDSKE 232
I D+ E FEE++ G DSD D EV + + V + D E
Sbjct: 51 ISDDEDFEAAFEEFDAGDDDSDSDSESEEVDEYDVVVDDDDSE 93
>07_03_1151 + 24385272-24386543
Length = 423
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/28 (50%), Positives = 14/28 (50%)
Query: 401 ATRPSYECPLCGKHFAFYNNRRRHMFIH 428
A R YECP CGK FA Y H H
Sbjct: 289 AKRTRYECPGCGKVFASYQALGGHRASH 316
>04_01_0477 - 6221990-6223224,6227722-6228817
Length = 776
Score = 30.3 bits (65), Expect = 3.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 436 CDTCLKCFTTSGELRAHVEHVHMKKPWPKR 465
C + CF T G+L A +EH K PKR
Sbjct: 345 CGQSVLCFDTDGKLLARLEHDERKSQRPKR 374
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 413 KHFAFYNNRR----RHMFIHTGLKPYKCDTCLKCFTTSGELRAHVEHVH 457
K F +Y +R + + H K +KC C K +T+G + HV VH
Sbjct: 10 KVFCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVH 58
>03_02_0928 +
12464325-12464498,12466494-12466679,12466929-12467021,
12467212-12467394,12467506-12467608,12467695-12467865,
12468086-12469084,12469178-12469254,12469485-12470337,
12470878-12471000,12471526-12471878
Length = 1104
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 424 HMFIHTGLK--PYKCDTCLKCFTTSGE--LRAHVEHVHMKK 460
H +I T K Y CDTCL+C E + H +H K
Sbjct: 721 HEYISTAKKISSYNCDTCLECVKPESEAMIPRHYKHARSSK 761
>01_03_0284 -
14595643-14595663,14595978-14596018,14596379-14596732,
14597023-14597494,14597524-14600001
Length = 1121
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 94 CLKFKRKALSSQKLLADLIAANKYVTLKDVLCVNRVENGLRSTLVRKSF 142
C F + ++L L AN ++ KD +C+ ++ + + + L R+SF
Sbjct: 423 CAVFPKDYEIDVEMLVKLWMANDFIPSKDGVCLEKIGHSIFNELARRSF 471
>09_06_0349 +
22457820-22457987,22458202-22458246,22458597-22458650,
22458742-22458846,22458932-22459138,22459217-22459302,
22459423-22460330,22460566-22460624
Length = 543
Score = 29.5 bits (63), Expect = 6.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 378 KCDRCPKSFTQKTNLVFHLRVHSAT 402
KC +CP+ F N H RVH T
Sbjct: 27 KCTKCPREFCSSINYRRHTRVHRRT 51
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 371 HTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
H+G +++ C RC K++ ++ HL+ TR + C CG+ F+
Sbjct: 137 HSGHRQWACSRCSKAYAVHSDYKAHLKT-CGTR-GHTCD-CGRVFS 179
>02_04_0316 - 21978330-21979397
Length = 355
Score = 29.5 bits (63), Expect = 6.1
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 12/74 (16%)
Query: 379 CDRCPKSFTQKTNLVFHLRVH--------SATRPSYECPLCGKHFAF---YNNRRRHMFI 427
CD C K F + NL H+R H + +RP P G+ F Y R+
Sbjct: 146 CDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPAGREVRFSCPYAGCNRNR-A 204
Query: 428 HTGLKPYKCDTCLK 441
H +P K C +
Sbjct: 205 HRRFRPLKSAVCAR 218
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 29.5 bits (63), Expect = 6.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 430 GLKPYKCDTCLKCFTTSGELRAH 452
G KP++C C K F G+ R H
Sbjct: 286 GAKPFRCRRCAKPFAVKGDWRTH 308
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 371 HTGEKRFKCDRCPKSFTQKTNLVFHLRVHSATRPSYECPLCGKHFA 416
H+G +++ C RC K++ ++ HL+ TR + C CG+ F+
Sbjct: 138 HSGHRQWACARCSKAYAVHSDYKAHLKT-CGTR-GHSCD-CGRVFS 180
>02_05_1277 - 35408097-35409080
Length = 327
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 427 IHTGLKPYKCDTCLKCFTTSGELRAHVEHVHMKKP 461
+ G Y+C TC KCF T L H KKP
Sbjct: 110 VRAGFYVYECKTCNKCFPTFQALGGH--RASHKKP 142
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.136 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,388,841
Number of Sequences: 37544
Number of extensions: 532853
Number of successful extensions: 1254
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1121
Number of HSP's gapped (non-prelim): 122
length of query: 477
length of database: 14,793,348
effective HSP length: 85
effective length of query: 392
effective length of database: 11,602,108
effective search space: 4548026336
effective search space used: 4548026336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -