GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001742-TA|BGIBMGA001742-PA|IPR000727|Target SNARE
coiled-coil region, IPR010989|t-snare, IPR006012|Syntaxin/epimorphin
family
         (338 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B49A1 Cluster: PREDICTED: similar to s-syntaxin...    44   0.004
UniRef50_Q7PSX0 Cluster: ENSANGP00000016148; n=4; Culicidae|Rep:...    43   0.013
UniRef50_Q7KVY7 Cluster: Syntaxin-4; n=7; Sophophora|Rep: Syntax...    36   2.0  
UniRef50_Q3W421 Cluster: Pyruvate dehydrogenase; n=1; Frankia sp...    35   3.5  
UniRef50_A1AKC6 Cluster: Putative uncharacterized protein; n=1; ...    35   3.5  
UniRef50_A5KLJ3 Cluster: Putative uncharacterized protein; n=2; ...    34   6.1  
UniRef50_Q16623 Cluster: Syntaxin-1A; n=71; Bilateria|Rep: Synta...    34   6.1  
UniRef50_A7LVW2 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_UPI00015B49A1 Cluster: PREDICTED: similar to s-syntaxin;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           s-syntaxin - Nasonia vitripennis
          Length = 204

 Score = 44.4 bits (100), Expect = 0.004
 Identities = 27/103 (26%), Positives = 39/103 (37%)

Query: 208 ISDEECQSLLDSNNISLFVDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFXXX 267
           I+ EE + +LDS   SLFVDN                                   F   
Sbjct: 88  ITSEELEDMLDSQETSLFVDNILAETKLAQQQLSDIETRHNELQKLEKSIVEVRDIFLEM 147

Query: 268 XXXXXXXXDQIDSVEYYALQATEHVECGGQQLLKGTVTRTKAR 310
                   +Q++ VEY+A +AT+ V+ G  +L+K    R K R
Sbjct: 148 AFLVERQGEQLNCVEYFASKATDDVDSGRDRLIKANEKRNKHR 190


>UniRef50_Q7PSX0 Cluster: ENSANGP00000016148; n=4; Culicidae|Rep:
           ENSANGP00000016148 - Anopheles gambiae str. PEST
          Length = 291

 Score = 42.7 bits (96), Expect = 0.013
 Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 6/141 (4%)

Query: 3   VRDRLAELQHVS--AGAGGVYADTVQLDPHDTSDDKIHTMFQEVERMRGWIRDLDDNTQL 60
           V+DRLAEL+  S  A  G     +    P   S ++I    ++  ++  WI+ +  N   
Sbjct: 2   VKDRLAELKGKSKYANQGPQDGASEVAMPLTRSQEEIFENLEKFAQLTAWIQTIRGNITK 61

Query: 61  VRRLYSDPNYHTN-RQLQEQLDRAVTQSNALGLKVCGALRQFETRVXXXXXXXXXXXTLW 119
           +R+      +H N + +++Q++  + ++N L  ++   +RQ E+ +            L+
Sbjct: 62  MRQQIGSSKFHYNDKPIRDQVEERLKENNQLCQRIYTTIRQLESDL---GEDCIRTGVLF 118

Query: 120 RIARLQYAATRRLYGDALDQH 140
           RI   Q+   R  Y  A  +H
Sbjct: 119 RIKNTQFLVIRDDYLSAYREH 139


>UniRef50_Q7KVY7 Cluster: Syntaxin-4; n=7; Sophophora|Rep:
           Syntaxin-4 - Drosophila melanogaster (Fruit fly)
          Length = 333

 Score = 35.5 bits (78), Expect = 2.0
 Identities = 25/107 (23%), Positives = 38/107 (35%)

Query: 205 NLAISDEECQSLLDSNNISLFVDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF 264
           N   S++E + L+++    LFVDN                                   F
Sbjct: 204 NSEASEQEIELLIENKTTKLFVDNFLQETEKERQTLREMMDRFNELRRLEKSIEEVHALF 263

Query: 265 XXXXXXXXXXXDQIDSVEYYALQATEHVECGGQQLLKGTVTRTKARK 311
                      + I  VE++A QAT HV+ G  +L +    + KARK
Sbjct: 264 MRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKKARK 310


>UniRef50_Q3W421 Cluster: Pyruvate dehydrogenase; n=1; Frankia sp.
           EAN1pec|Rep: Pyruvate dehydrogenase - Frankia sp.
           EAN1pec
          Length = 358

 Score = 34.7 bits (76), Expect = 3.5
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 10  LQHVSAGAGGVY--ADTVQLDPHDTSDDKIHTMFQEVERMRGW-IRDLDDNTQLVRRLYS 66
           L+H  +G G V   A+T ++ PH TSDD   + +QE   +  W  RD  D   L+     
Sbjct: 245 LEHARSGQGPVLIEANTYRMAPHTTSDDA--SRYQEAAEVAAWRARDPIDRVALLLGHTH 302

Query: 67  DPNYHTNRQLQEQLDRAVTQSNALGL 92
           DP +    + + +   A  +   L L
Sbjct: 303 DPAWFEGVRAEAEEAAATLRRECLAL 328


>UniRef50_A1AKC6 Cluster: Putative uncharacterized protein; n=1;
           Pelobacter propionicus DSM 2379|Rep: Putative
           uncharacterized protein - Pelobacter propionicus (strain
           DSM 2379)
          Length = 245

 Score = 34.7 bits (76), Expect = 3.5
 Identities = 21/69 (30%), Positives = 33/69 (47%)

Query: 34  DDKIHTMFQEVERMRGWIRDLDDNTQLVRRLYSDPNYHTNRQLQEQLDRAVTQSNALGLK 93
           + K+    QE+  +RG + D DD  Q  +   SD     N +L+  +DR   ++NA   K
Sbjct: 100 ESKLQEKEQEIAWVRGALEDKDDMIQYWKDRSSDSLISENVKLKGHVDRVNEENNAKNRK 159

Query: 94  VCGALRQFE 102
              A+ Q E
Sbjct: 160 AVLAVHQIE 168


>UniRef50_A5KLJ3 Cluster: Putative uncharacterized protein; n=2;
          Clostridiales|Rep: Putative uncharacterized protein -
          Ruminococcus torques ATCC 27756
          Length = 289

 Score = 33.9 bits (74), Expect = 6.1
 Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 5/49 (10%)

Query: 42 QEVERMRGWIRDLDDNTQLVRRLYSDPNYHTNRQLQEQLDRAVTQSNAL 90
          Q + ++ GW+ D+ DN   +++L S+     N++L+EQ+D   T++N L
Sbjct: 52 QGMNQIGGWMGDMKDNFSTMKQLKSE-----NKKLREQVDALTTENNYL 95


>UniRef50_Q16623 Cluster: Syntaxin-1A; n=71; Bilateria|Rep:
           Syntaxin-1A - Homo sapiens (Human)
          Length = 288

 Score = 33.9 bits (74), Expect = 6.1
 Identities = 22/111 (19%), Positives = 51/111 (45%), Gaps = 3/111 (2%)

Query: 41  FQEVERMRGWIRDLDDNTQLVRRLYSD--PNYHTNRQLQEQLDRAVTQSNALGLKVCGAL 98
           F++VE +RG+I  + +N + V+R +S    + + + + +E+L+  ++       KV   L
Sbjct: 34  FEQVEEIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKL 93

Query: 99  RQFETRVXXXXXXXXXXXTLWRIARLQYAATRRLYGDALDQHRRALDAVRD 149
           +  E  +            L RI + Q++   R + + + ++       R+
Sbjct: 94  KSIEQSIEQEEGLNRSSADL-RIRKTQHSTLSRKFVEVMSEYNATQSDYRE 143


>UniRef50_A7LVW2 Cluster: Putative uncharacterized protein; n=1;
          Bacteroides ovatus ATCC 8483|Rep: Putative
          uncharacterized protein - Bacteroides ovatus ATCC 8483
          Length = 665

 Score = 33.5 bits (73), Expect = 8.0
 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 31 DTSDDKIHTMFQEVERMRGWIRDLDDNTQLVRRLYSDPNYHTNRQLQEQLDR-AVTQSN 88
          D  +D +  + + V  +   +RD++ NT+ +R LY++  + TN  ++E+ D   +T SN
Sbjct: 22 DDLEDDVDALKKRVTALETQVRDINSNTEALRELYNEGTFITN--IEEKSDSYTLTLSN 78


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.321    0.133    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,584,660
Number of Sequences: 1657284
Number of extensions: 9128249
Number of successful extensions: 21434
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 21430
Number of HSP's gapped (non-prelim): 10
length of query: 338
length of database: 575,637,011
effective HSP length: 101
effective length of query: 237
effective length of database: 408,251,327
effective search space: 96755564499
effective search space used: 96755564499
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 73 (33.5 bits)