Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001742-TA|BGIBMGA001742-PA|IPR000727|Target SNARE
coiled-coil region, IPR010989|t-snare, IPR006012|Syntaxin/epimorphin
family
(338 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L37732-1|AAA75649.1| 291|Drosophila melanogaster syntaxin 1A pr... 40 0.006
AY061472-1|AAL29020.1| 291|Drosophila melanogaster LD43943p pro... 40 0.006
AE014297-3456|AAF56232.1| 291|Drosophila melanogaster CG31136-P... 40 0.006
AL021728-10|CAA16817.1| 315|Drosophila melanogaster EG:95B7.1 p... 36 0.080
AY070922-1|AAL48544.1| 333|Drosophila melanogaster RE02884p pro... 36 0.11
AE014298-462|AAF45823.2| 333|Drosophila melanogaster CG2715-PA ... 36 0.11
>L37732-1|AAA75649.1| 291|Drosophila melanogaster syntaxin 1A
protein.
Length = 291
Score = 39.5 bits (88), Expect = 0.006
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 6/148 (4%)
Query: 4 RDRLAELQHVSAGAGGVYADTVQLDPHDTSDDKIHTMFQEVERMRGWIRDLDDNTQLVRR 63
+DRLA L + V +D HD+ D F +VE +RG I + DN + V++
Sbjct: 3 KDRLAALHAAQSDDEEETEVAVNVDGHDSYMDDF---FAQVEEIRGMIDKVQDNVEEVKK 59
Query: 64 LYSD--PNYHTNRQLQEQLDRAVTQSNALGLKVCGALRQFETRVXXXXXXXXXXXTLWRI 121
+S T+ + +++L+ + +V G L+ E + L RI
Sbjct: 60 KHSAILSAPQTDEKTKQELEDLMADIKKNANRVRGKLKGIEQNIEQEEQQNKSSADL-RI 118
Query: 122 ARLQYAATRRLYGDALDQHRRALDAVRD 149
+ Q++ R + + + ++ R R+
Sbjct: 119 RKTQHSTLSRKFVEVMTEYNRTQTDYRE 146
Score = 29.1 bits (62), Expect = 9.2
Identities = 18/103 (17%), Positives = 33/103 (32%)
Query: 209 SDEECQSLLDSNNISLFVDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFXXXX 268
+D+E + +L+ N S+F F
Sbjct: 164 NDDELEKMLEEGNSSVFTQGIIMETQQAKQTLADIEARHQDIMKLETSIKELHDMFMDMA 223
Query: 269 XXXXXXXDQIDSVEYYALQATEHVECGGQQLLKGTVTRTKARK 311
+ ID +EY+ A ++V+ Q K ++KAR+
Sbjct: 224 MLVESQGEMIDRIEYHVEHAMDYVQTATQDTKKALKYQSKARR 266
>AY061472-1|AAL29020.1| 291|Drosophila melanogaster LD43943p
protein.
Length = 291
Score = 39.5 bits (88), Expect = 0.006
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 6/148 (4%)
Query: 4 RDRLAELQHVSAGAGGVYADTVQLDPHDTSDDKIHTMFQEVERMRGWIRDLDDNTQLVRR 63
+DRLA L + V +D HD+ D F +VE +RG I + DN + V++
Sbjct: 3 KDRLAALHAAQSDDEEETEVAVNVDGHDSYMDDF---FAQVEEIRGMIDKVQDNVEEVKK 59
Query: 64 LYSD--PNYHTNRQLQEQLDRAVTQSNALGLKVCGALRQFETRVXXXXXXXXXXXTLWRI 121
+S T+ + +++L+ + +V G L+ E + L RI
Sbjct: 60 KHSAILSAPQTDEKTKQELEDLMADIKKNANRVRGKLKGIEQNIEQEEQQNKSSADL-RI 118
Query: 122 ARLQYAATRRLYGDALDQHRRALDAVRD 149
+ Q++ R + + + ++ R R+
Sbjct: 119 RKTQHSTLSRKFVEVMTEYNRTQTDYRE 146
Score = 29.1 bits (62), Expect = 9.2
Identities = 18/103 (17%), Positives = 33/103 (32%)
Query: 209 SDEECQSLLDSNNISLFVDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFXXXX 268
+D+E + +L+ N S+F F
Sbjct: 164 NDDELEKMLEEGNSSVFTQGIIMETQQAKQTLADIEARHQDIMKLETSIKELHDMFMDMA 223
Query: 269 XXXXXXXDQIDSVEYYALQATEHVECGGQQLLKGTVTRTKARK 311
+ ID +EY+ A ++V+ Q K ++KAR+
Sbjct: 224 MLVESQGEMIDRIEYHVEHAMDYVQTATQDTKKALKYQSKARR 266
>AE014297-3456|AAF56232.1| 291|Drosophila melanogaster CG31136-PA
protein.
Length = 291
Score = 39.5 bits (88), Expect = 0.006
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 6/148 (4%)
Query: 4 RDRLAELQHVSAGAGGVYADTVQLDPHDTSDDKIHTMFQEVERMRGWIRDLDDNTQLVRR 63
+DRLA L + V +D HD+ D F +VE +RG I + DN + V++
Sbjct: 3 KDRLAALHAAQSDDEEETEVAVNVDGHDSYMDDF---FAQVEEIRGMIDKVQDNVEEVKK 59
Query: 64 LYSD--PNYHTNRQLQEQLDRAVTQSNALGLKVCGALRQFETRVXXXXXXXXXXXTLWRI 121
+S T+ + +++L+ + +V G L+ E + L RI
Sbjct: 60 KHSAILSAPQTDEKTKQELEDLMADIKKNANRVRGKLKGIEQNIEQEEQQNKSSADL-RI 118
Query: 122 ARLQYAATRRLYGDALDQHRRALDAVRD 149
+ Q++ R + + + ++ R R+
Sbjct: 119 RKTQHSTLSRKFVEVMTEYNRTQTDYRE 146
Score = 29.1 bits (62), Expect = 9.2
Identities = 18/103 (17%), Positives = 33/103 (32%)
Query: 209 SDEECQSLLDSNNISLFVDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFXXXX 268
+D+E + +L+ N S+F F
Sbjct: 164 NDDELEKMLEEGNSSVFTQGIIMETQQAKQTLADIEARHQDIMKLETSIKELHDMFMDMA 223
Query: 269 XXXXXXXDQIDSVEYYALQATEHVECGGQQLLKGTVTRTKARK 311
+ ID +EY+ A ++V+ Q K ++KAR+
Sbjct: 224 MLVESQGEMIDRIEYHVEHAMDYVQTATQDTKKALKYQSKARR 266
>AL021728-10|CAA16817.1| 315|Drosophila melanogaster EG:95B7.1
protein.
Length = 315
Score = 35.9 bits (79), Expect = 0.080
Identities = 30/123 (24%), Positives = 44/123 (35%), Gaps = 3/123 (2%)
Query: 190 LQHYELTSPNALTAPNLAISDEECQSLLDSNNISLFVDNXXXXXXXXXXXXXXXXXXXXX 249
LQ+YE L S++E + L+++ LFVDN
Sbjct: 185 LQNYETKVKKNLRLHTKITSEQEIELLIENKTTKLFVDNETEKERQTLREMMDRFNELRR 244
Query: 250 XXXXXXXXXXXXXXFXXXXXXXXXXXDQIDSVEYYALQATEHVECGGQQLLKGTVTRTKA 309
F + I VE++A QAT HV+ G +L + + KA
Sbjct: 245 LEKSIEEVHAL---FMRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKKA 301
Query: 310 RKV 312
RKV
Sbjct: 302 RKV 304
>AY070922-1|AAL48544.1| 333|Drosophila melanogaster RE02884p
protein.
Length = 333
Score = 35.5 bits (78), Expect = 0.11
Identities = 25/107 (23%), Positives = 38/107 (35%)
Query: 205 NLAISDEECQSLLDSNNISLFVDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF 264
N S++E + L+++ LFVDN F
Sbjct: 204 NSEASEQEIELLIENKTTKLFVDNFLQDTEKERQTLREMMDRFNELRRLEKSIEEVHALF 263
Query: 265 XXXXXXXXXXXDQIDSVEYYALQATEHVECGGQQLLKGTVTRTKARK 311
+ I VE++A QAT HV+ G +L + + KARK
Sbjct: 264 MRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKKARK 310
>AE014298-462|AAF45823.2| 333|Drosophila melanogaster CG2715-PA
protein.
Length = 333
Score = 35.5 bits (78), Expect = 0.11
Identities = 25/107 (23%), Positives = 38/107 (35%)
Query: 205 NLAISDEECQSLLDSNNISLFVDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF 264
N S++E + L+++ LFVDN F
Sbjct: 204 NSEASEQEIELLIENKTTKLFVDNFLQETEKERQTLREMMDRFNELRRLEKSIEEVHALF 263
Query: 265 XXXXXXXXXXXDQIDSVEYYALQATEHVECGGQQLLKGTVTRTKARK 311
+ I VE++A QAT HV+ G +L + + KARK
Sbjct: 264 MRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQKKARK 310
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.321 0.133 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,116,209
Number of Sequences: 52641
Number of extensions: 441262
Number of successful extensions: 1078
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1069
Number of HSP's gapped (non-prelim): 10
length of query: 338
length of database: 24,830,863
effective HSP length: 85
effective length of query: 253
effective length of database: 20,356,378
effective search space: 5150163634
effective search space used: 5150163634
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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