Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001741-TA|BGIBMGA001741-PA|IPR007087|Zinc finger,
C2H2-type
(320 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 54 2e-07
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 50 3e-06
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 40 0.002
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 37 0.019
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 37 0.025
04_04_0157 + 23165638-23166633 36 0.057
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 35 0.100
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 34 0.13
09_02_0366 + 7941550-7942161,7942230-7942775 34 0.17
02_04_0316 - 21978330-21979397 34 0.17
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 34 0.17
11_08_0066 - 28131521-28132012 33 0.23
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 33 0.23
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 33 0.31
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 33 0.31
10_01_0358 - 3941313-3941328,3942374-3942693,3942774-3942912,394... 32 0.53
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 32 0.53
11_03_0150 + 10810322-10810380,10810530-10810593,10810803-108110... 32 0.70
07_03_1221 + 24968710-24969123 32 0.70
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 32 0.70
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 32 0.70
01_01_0990 + 7847066-7847478,7847713-7848679 32 0.70
09_04_0564 + 18565583-18566449,18569662-18570123 31 0.93
08_02_1172 + 24898290-24899141,24900864-24901328 31 0.93
06_03_1306 + 29208882-29209547,29209641-29209854,29209947-292100... 31 0.93
05_04_0280 - 19752112-19752451,19754104-19755587 31 0.93
01_05_0421 + 21990034-21990392,21991691-21992681 31 0.93
11_08_0016 + 27652728-27653011,27653105-27653198,27653277-276537... 30 2.2
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 30 2.2
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 30 2.2
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 30 2.8
06_03_1478 - 30420097-30420651 30 2.8
06_01_0431 + 3066701-3067729 29 3.8
05_05_0117 + 22503271-22503891 29 3.8
04_04_1028 + 30230224-30231274,30231500-30231609,30232144-302321... 29 3.8
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 29 3.8
03_05_0291 - 22837412-22838128 29 3.8
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 29 3.8
01_06_1284 + 35994595-35995074 29 3.8
12_02_0916 - 24271151-24271894 29 5.0
06_02_0069 - 11126235-11127538,11128361-11128421 29 5.0
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 29 5.0
11_08_0067 - 28135216-28135728 29 6.6
11_04_0218 + 14983132-14984658,14984762-14984869,14984964-149851... 29 6.6
04_04_0037 + 22309681-22310532,22310638-22310977,22311613-22311749 29 6.6
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 29 6.6
12_02_0943 - 24662147-24662195,24662440-24662834,24662979-246630... 28 8.7
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 28 8.7
07_03_1548 + 27630988-27631049,27631632-27631767,27631904-276320... 28 8.7
04_01_0354 - 4646826-4647314 28 8.7
04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-89... 28 8.7
03_05_0255 + 22435027-22435072,22436022-22437085 28 8.7
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 54.0 bits (124), Expect = 2e-07
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 12/142 (8%)
Query: 173 CMCEICGQMFRCMSLLKDHYDAHNSSSFECGE--CGKRFPRRSRLVIHERVHATRPLHSC 230
C E CG+ F ++ L+ H HN + C E CGK+F S+L H +H + C
Sbjct: 89 CSYENCGKTFVDVAALRKHAHVHNERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDFIC 148
Query: 231 AI--CGRRFTVYANMIRH-RDSVHMNLKKFDCNLCGKKFKQLCGLRTHIDCYHH------ 281
CG+ F++ N+ H + N CGK+F L++H+ +
Sbjct: 149 PHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSHVKGHEKTGTPIT 208
Query: 282 KQPWPKRNRKKASNNP-TPVTS 302
Q P ++ ++S+ P TP T+
Sbjct: 209 AQYVPSSDKPQSSSKPATPATT 230
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 175 CEICGQMFRCMSLLKDHYDAHNSS-SFECG--ECGKRFPRRSRLVIHERVHATRPLHSCA 231
C+ CG F+ + LK H +H+ SF C +C + R+ L H H + L +C+
Sbjct: 62 CQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKHQGK-LFTCS 120
Query: 232 I--CGRRFTVYANMIRHRDSVH------MNLKKFDCNL--CGKKFKQLCGLRTH 275
+ CGR+F++ ANM RH +H + ++F C C K FK ++ H
Sbjct: 121 MDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKH 174
Score = 39.5 bits (88), Expect = 0.004
Identities = 57/277 (20%), Positives = 96/277 (34%), Gaps = 21/277 (7%)
Query: 15 VQLSRHKRVVPRKNTSYMSHLRTKHPSDIVCALCGHSFVSKKGLVLHTNFKHKFHSKTVP 74
V+ ++H R + R + + +R+K C + H K + + K V
Sbjct: 3 VEATQH-RDIRRYKCEFCTVVRSKK-----CLIRAHMVAHHKEELDKSEIYKSNGEKVVH 56
Query: 75 KDGPACEECNIVFVSGHALDTHMSLSTKHNKSLDTSIRRRVHKKASDH--KRPAHHKPPE 132
+ C+EC F L HM + + DH + H+
Sbjct: 57 EGDHTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKHQGKL 116
Query: 133 GPIPCEQCDMELPNARRYDRHFRKLHPGKNRTKFFTEDSQCMCEICGQMFRCMSLLKDHY 192
+ C + RH +++H + TK C E C ++F+ S +K H
Sbjct: 117 FTCSMDGCGRKFSIKANMQRHVKEIHEDETATKS-NRQFVCKEEGCNKVFKYASKMKKHE 175
Query: 193 DAHNSSSF---ECGE--CGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHR 247
++H + C E C K F L H + A C ICG + + N+ RH
Sbjct: 176 ESHVKLDYVEVVCCEPGCMKTFTNVECLRAHNQ--ACHQYVQCDICGEKH-LKKNIKRHL 232
Query: 248 DSVH--MNLKKFDCNL--CGKKFKQLCGLRTHIDCYH 280
+ + ++ C+ C F L HI H
Sbjct: 233 RAHEEVPSTERIKCSFEGCECSFSNKSNLTKHIKASH 269
Score = 39.1 bits (87), Expect = 0.005
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 202 CGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHRDSVHMNLKKFDCNL 261
C ECG F + + L H + H+ C + F+ +R + K F C++
Sbjct: 62 CQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKHQGKLFTCSM 121
Query: 262 --CGKKFKQLCGLRTHIDCYHHKQPWPKRNRK 291
CG+KF ++ H+ H + K NR+
Sbjct: 122 DGCGRKFSIKANMQRHVKEIHEDETATKSNRQ 153
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 40.3 bits (90), Expect = 0.002
Identities = 32/117 (27%), Positives = 46/117 (39%), Gaps = 7/117 (5%)
Query: 173 CMCEICGQMFRCMSLLKDHYDAHNSSSFEC--GECGKRFPRRSRLVIHERVHATRPLHSC 230
C E CG+ F L+ H H + C C K+F S+L H +H C
Sbjct: 45 CSYEGCGKTFVDAGALRKHAHVHGERQYVCHYAGCDKKFLDSSKLKRHFLIHTGEKNFVC 104
Query: 231 AI--CGR--RFTVYANMIRHRDSVHM-NLKKFDCNLCGKKFKQLCGLRTHIDCYHHK 282
CG+ F++ N+ H + + N C ++F Q LR HI H K
Sbjct: 105 PHEGCGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQESKLRAHIKQQHEK 161
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 37.1 bits (82), Expect = 0.019
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 136 PCEQCDMELPNARRYDRHFRKLHPGKNRTKFFTEDSQCMCEICGQMFRCMSLLKDHYDAH 195
P E C+ + RH +++H + + ++ C E CG+ F+ S L+ H ++H
Sbjct: 319 PMEGCNRKFTIKGNIQRHVQEMHKDGSPCES-KKEFICPEENCGKTFKYASKLQKHEESH 377
Query: 196 ---NSSSFECGE--CGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHRDSV 250
+ S C E C K F L H + + C +CG + + N RH+ +
Sbjct: 378 VKLDYSEVICCEPGCMKAFTNLECLKAHNKSCHRHVV--CDVCGTK-QLKKNFKRHQ-RM 433
Query: 251 HMN---LKKFDCNL--CGKKFKQLCGLRTHIDCYH-HKQPW 285
H ++ C+L C F + L H+ H K+P+
Sbjct: 434 HEGSCVTERVRCHLKDCKLSFSKKSNLDKHVKAVHEQKRPF 474
Score = 34.7 bits (76), Expect = 0.100
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 205 CGKRFPRRSRLVIHERVHATRPLHSCAI--CGRRFTVYANMIRHRDSVHM------NLKK 256
C + R+ L H H + L +C + C R+FT+ N+ RH +H + K+
Sbjct: 294 CPFSYSRKDHLNRHLLTHQGK-LFACPMEGCNRKFTIKGNIQRHVQEMHKDGSPCESKKE 352
Query: 257 FDC--NLCGKKFKQLCGLRTH 275
F C CGK FK L+ H
Sbjct: 353 FICPEENCGKTFKYASKLQKH 373
Score = 31.9 bits (69), Expect = 0.70
Identities = 45/169 (26%), Positives = 64/169 (37%), Gaps = 27/169 (15%)
Query: 110 SIRRRVHKKASDHKRPAHHKPPEGPIPCEQCDMELPNARRYDRHFRKLHPGKNRTKFFTE 169
+I+R V + D P K E P E C A + +H ++ K
Sbjct: 332 NIQRHVQEMHKDGS-PCESKK-EFICPEENCGKTFKYASKLQKH------EESHVKLDYS 383
Query: 170 DSQCMCEICGQMFRCMSLLKDHYDAHNSSSFE---CGECG-----KRFPRRSRLVIHERV 221
+ C C + F + LK AHN S C CG K F R R+ HE
Sbjct: 384 EVICCEPGCMKAFTNLECLK----AHNKSCHRHVVCDVCGTKQLKKNFKRHQRM--HEGS 437
Query: 222 HATRPLHSCAI--CGRRFTVYANMIRHRDSVHMNLKKFDCNL--CGKKF 266
T + C + C F+ +N+ +H +VH + F C CGK F
Sbjct: 438 CVTERVR-CHLKDCKLSFSKKSNLDKHVKAVHEQKRPFVCGFSGCGKSF 485
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 36.7 bits (81), Expect = 0.025
Identities = 33/123 (26%), Positives = 45/123 (36%), Gaps = 9/123 (7%)
Query: 163 RTKFFTEDSQCMCEICGQMFRCMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERVH 222
R K E QC E C F + L+ H N + E CGKRF L H+ VH
Sbjct: 786 RKKAKVEAFQCDIEFCDMTFETKAELRAHQ--RNICTDE--SCGKRFSSHKYLKRHQCVH 841
Query: 223 ATRPLHSCAI--CGRRFTVYANMIRHRDSVHMNLKKFDCNL--CGKKFKQLCGLRTHIDC 278
C C F H VH + + C+ CG+ F+ + H
Sbjct: 842 RDERPFKCPWDGCPMTFKWLWAQTEH-IRVHTGERPYKCSAPDCGQSFRYVSDYSRHRKK 900
Query: 279 YHH 281
++H
Sbjct: 901 FNH 903
>04_04_0157 + 23165638-23166633
Length = 331
Score = 35.5 bits (78), Expect = 0.057
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 223 ATRPLHSCAICGRRFTVYANMIRHRDSVH 251
A +H C +CGRRF ++RH D++H
Sbjct: 99 AAAAVHLCRVCGRRFRARDTLLRHFDAIH 127
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 34.7 bits (76), Expect = 0.100
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 188 LKDHY-DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H ++C CGKR+ S H +V TR + C CG F+ + + H
Sbjct: 151 IKKHFCRKHGEKKWKCDRCGKRYAVHSDWKAHSKVCGTRE-YKCD-CGTVFSRRDSFVTH 208
Query: 247 R 247
R
Sbjct: 209 R 209
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 188 LKDHY-DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H + C CGKR+ ++ L H + TR + C CG FT + + H
Sbjct: 124 IKKHFCRKHGEKRWTCQRCGKRYAVQADLKAHTKTCGTRE-YRCD-CGTLFTRRDSFVTH 181
Query: 247 R 247
R
Sbjct: 182 R 182
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 175 CEICGQMFRCMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIH 218
C+ CG+ + + LK H + + C +CG F RR V H
Sbjct: 139 CQRCGKRYAVQADLKAHTKTCGTREYRC-DCGTLFTRRDSFVTH 181
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 218 HERVHATRPLHSCAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHI 276
+ R H RP ++C CG+RF V + H N K +CG FK L+ H+
Sbjct: 270 YRRKHGARP-YACRRCGKRFAVRGDWRTH----EKNCGKLWFCVCGSDFKHKRSLKDHV 323
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 188 LKDHYDA-HNSSSFECGECGKRFPRRSRLVIHER 220
L+ HY H + + C CGKRF R HE+
Sbjct: 266 LQTHYRRKHGARPYACRRCGKRFAVRGDWRTHEK 299
>02_04_0316 - 21978330-21979397
Length = 355
Score = 33.9 bits (74), Expect = 0.17
Identities = 30/102 (29%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Query: 124 RPAHHKPPEGPIPCEQCDMELPNARRYDRHFRKLHPGKNRTKFFTEDSQC----MCEICG 179
RP KPP G C N R R FR L F S C CE CG
Sbjct: 178 RPGQPKPPAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRR-SHCPKLYACERCG 236
Query: 180 --QMFRCMSLLKDHY-DAHNSSSFECGECGKRFPRRSRLVIH 218
+ F ++ L+ H + + C CG F R+ +L H
Sbjct: 237 GKKRFAVLADLRSHLRHCGEEAQWRC-SCGTTFSRKDKLFGH 277
Score = 31.9 bits (69), Expect = 0.70
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 175 CEICGQMFRCMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSC--AI 232
C+ICG+ FR + L+ H AH F+ + R P + + V + P C
Sbjct: 146 CDICGKGFRRDANLRMHMRAH-GDRFKTLDALSR-PGQPKPPAGREVRFSCPYAGCNRNR 203
Query: 233 CGRRFTVYANMIRHRDSVHMN--LKKFDCNLCG--KKFKQLCGLRTHIDCYHHKQPW 285
RRF + + R+ + K + C CG K+F L LR+H+ + W
Sbjct: 204 AHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLADLRSHLRHCGEEAQW 260
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 188 LKDHYDA-HNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H ++C +C KR+ S H +V TR + C CG F+ + I H
Sbjct: 138 IKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAHSKVCGTRE-YRCD-CGTLFSRRDSFITH 195
Query: 247 R 247
R
Sbjct: 196 R 196
>11_08_0066 - 28131521-28132012
Length = 163
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 16/67 (23%)
Query: 197 SSSFECGECGKRFPRRSRLVIHERVH-----------ATRPL-HSCAICGRRF----TVY 240
+++FEC CG+RFP L H H ++PL H+C +CG F +
Sbjct: 68 AAAFECRTCGRRFPSHQALGGHRTSHLRPTTNKRRPGPSKPLIHACEVCGLGFQMGQALG 127
Query: 241 ANMIRHR 247
+M RHR
Sbjct: 128 GHMRRHR 134
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
Query: 45 CALCGHSFVSKKGLVLHTNFKHKFHSKTVPKDGP------ACEECNIVFVSGHALDTHMS 98
C CG F S + L H H + + GP ACE C + F G AL HM
Sbjct: 73 CRTCGRRFPSHQALGGHRT-SHLRPTTNKRRPGPSKPLIHACEVCGLGFQMGQALGGHMR 131
Query: 99 LSTKHNKSL 107
N L
Sbjct: 132 RHRPRNIDL 140
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 33.5 bits (73), Expect = 0.23
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 188 LKDHYDAHNSS--SFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIR 245
+K H+ +S + C C K + S H + TR HSC CGR F+ + I
Sbjct: 130 IKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTCGTRG-HSCD-CGRVFSRVESFIE 187
Query: 246 HRDS 249
H+D+
Sbjct: 188 HQDT 191
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 188 LKDHY-DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H ++C +C KR+ +S H ++ TR + C CG F+ + I H
Sbjct: 107 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKICGTRE-YRCD-CGTLFSRRDSFITH 164
Query: 247 R 247
R
Sbjct: 165 R 165
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 33.1 bits (72), Expect = 0.31
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Query: 161 KNRTKFFT-EDSQCMCEICGQMFRCMSLLKDHYDAHNSS-SFEC--GECGKRFPRRSRLV 216
KNR + + + C + CG+ FR L+ H HN ++C C F
Sbjct: 552 KNRAELSVHKKNTCTVKSCGRHFRSHKYLRRHQSIHNDDMPYKCPWEGCSMAFKWSWDRG 611
Query: 217 IHERVHATRPLHSCAI--CGRRFTVYANMIRHR 247
H +VHA + + C C + + ++ RH+
Sbjct: 612 EHFQVHAGKRPYKCTTPGCSKIYKFVSDFTRHK 644
>10_01_0358 -
3941313-3941328,3942374-3942693,3942774-3942912,
3943441-3943543,3944745-3944890,3944941-3945314,
3946416-3946512,3947118-3947566
Length = 547
Score = 32.3 bits (70), Expect = 0.53
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 197 SSSFECGECGKRFPRRSRLVIHE 219
SSSF C CGKRFP + + HE
Sbjct: 41 SSSFACRVCGKRFPSQQAMAGHE 63
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 188 LKDHYDAHNSS--SFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIR 245
+K H+ +S + C C K + S H + TR H+C CGR F+ + I
Sbjct: 129 IKKHFRRKHSGHRQWACSRCSKAYAVHSDYKAHLKTCGTRG-HTCD-CGRVFSRVESFIE 186
Query: 246 HRDS 249
H+D+
Sbjct: 187 HQDA 190
>11_03_0150 +
10810322-10810380,10810530-10810593,10810803-10811047,
10811627-10811747,10811821-10811895,10811986-10812112,
10812194-10812939,10813065-10813195,10813547-10813636,
10814000-10814105
Length = 587
Score = 31.9 bits (69), Expect = 0.70
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 110 SIRRRVHKKASDHKRPAHH--KPPEGPIPCEQCDMELPNARRYDRHFRKLHPGKNRTKFF 167
S +RR+ +A+D + A +PP P+P Q +P+ D H +K P K R
Sbjct: 454 SEQRRI--QANDRVKSAERQIRPPSKPMPSRQ----IPSNGMRDAHAKKKQPMKRRFNDL 507
Query: 168 TEDSQCMCEICGQMFR 183
+ED + + MFR
Sbjct: 508 SEDEEDPLAMIRSMFR 523
>07_03_1221 + 24968710-24969123
Length = 137
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 101 TKHNKSLDTSIRRRVHKKASDHKRPAHHKPPEGPIPCEQCDMELPNARR 149
T NK + + VH + PA+HKPP P C +C + L +ARR
Sbjct: 59 TDCNKEMRNLVHHLVHLA---RRCPAYHKPPPTPHCCRRC-LTLEHARR 103
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 39 HPSD-IVCALCGHSFVSKKGLVLHTNFKHKFHSKTVPKDGPACEECNIVFVSGHALDTHM 97
HPS + C +C F +GL LH HK + + + G +C C F + L+ H+
Sbjct: 458 HPSPGLKCKICSQEFSDDQGLGLHWTEVHKKEVRWLFR-GYSCAVCMDSFTNRRVLERHV 516
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 188 LKDHYDA-HNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K HY H ++C C K++ +S H ++ T+ + C CG F+ + I H
Sbjct: 129 IKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTKICGTKE-YRCD-CGTIFSRKDSFITH 186
Query: 247 R 247
R
Sbjct: 187 R 187
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 188 LKDHY-DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H ++C +C KR+ +S H + TR + C CG F+ + I H
Sbjct: 88 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTRE-YRCD-CGTLFSRRDSFITH 145
Query: 247 R 247
R
Sbjct: 146 R 146
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 252 MNLKKFDCNLCGKKFKQLCGLRTHIDCYHHKQPWPKRNR 290
M +F C +CGK F++ L+ H H PW R R
Sbjct: 20 MATNRFVCEICGKGFQRDQNLQLH--RRGHNLPWKLRQR 56
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 31.5 bits (68), Expect = 0.93
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 218 HERVHATRPLHSCAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHID 277
++R H +P C CG+ F V + H + K + C LCG +FK L+ H
Sbjct: 348 YKRKHGLKPF-LCRKCGKAFAVKGDWRTHEKNCG---KLWYC-LCGSEFKHKRSLKDHAR 402
Query: 278 CYHH 281
+ H
Sbjct: 403 AFGH 406
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 31.5 bits (68), Expect = 0.93
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 218 HERVHATRPLHSCAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHID 277
++R H +P C CG+ F V + H + K + C LCG +FK L+ H
Sbjct: 343 YKRKHGLKPF-LCRKCGKAFAVKGDWRTHEKNCG---KLWYC-LCGSEFKHKRSLKDHAR 397
Query: 278 CYHH 281
+ H
Sbjct: 398 AFGH 401
>06_03_1306 +
29208882-29209547,29209641-29209854,29209947-29210023,
29210132-29210171,29210254-29210323,29210419-29210488,
29210747-29210995,29212810-29214700,29215458-29215771
Length = 1196
Score = 31.5 bits (68), Expect = 0.93
Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 2/122 (1%)
Query: 81 EECNIVFVSGHALDTHMSLSTKHNKSLDTSIRRRVHKKASDHKRPAHHKPPEGPIPCEQC 140
EE + V +S ++L ++ TS ++ +A + E P +C
Sbjct: 400 EEQHKVSISSNSLSLKPPAESQPESPKPTSEKKEAESEAG--AATSAQPSSEDKSPDAEC 457
Query: 141 DMELPNARRYDRHFRKLHPGKNRTKFFTEDSQCMCEICGQMFRCMSLLKDHYDAHNSSSF 200
P D R+L K+ E + C CG++ R + L+ H + +
Sbjct: 458 KSSPPVCTTQDTQRRRLEKEKHGKTVDKETQKVSCNYCGKVVRTYNRLEHHLAGIRGNVY 517
Query: 201 EC 202
C
Sbjct: 518 PC 519
>05_04_0280 - 19752112-19752451,19754104-19755587
Length = 607
Score = 31.5 bits (68), Expect = 0.93
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 99 LSTKHNKSLDTSIRRRVHKKASDHKRPAHHKPPEGPIPCEQCDMELPNARRY 150
+S +H + L +RR +H+ A+ H+ PA PP+G IP P A R+
Sbjct: 1 MSRRHARPLLPLLRRHLHRSATVHRSPA-PAPPDG-IPSSSSAPPDPAAARW 50
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 189 KDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHR 247
K + H ++C +C K++ S H ++ TR + C CG F+ + I HR
Sbjct: 72 KHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKICGTRE-YKCD-CGTIFSRRDSFITHR 128
>11_08_0016 +
27652728-27653011,27653105-27653198,27653277-27653738,
27653819-27654651,27654734-27654886,27654984-27655242,
27655653-27655691,27655708-27655791
Length = 735
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 106 SLDTSIRRRVHKKASDHKRPAHHKPPEGPIPCEQCDMELPNARR 149
S+D + RV+K +D P P P PC Q D P+ RR
Sbjct: 213 SMDARVEERVNKVLADMNIPRGTTPAVHPTPCAQHDAS-PSQRR 255
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 188 LKDHYDA-HNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H + C CGKR+ S H + TR + C CG F+ +++ H
Sbjct: 111 IKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHVKNCGTRE-YRCD-CGILFSRKDSLLTH 168
Query: 247 R 247
R
Sbjct: 169 R 169
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 230 CAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHIDCYHHKQPWPKRN 289
C C R F +++H+ + H F C++C KK G+ H+ HK+ K
Sbjct: 13 CYYCDREFDDEKILVQHQKAKH-----FKCHVCHKKLSTAGGMAIHV-LQVHKESVTKVP 66
Query: 290 RKKASNNPTPV 300
K T +
Sbjct: 67 NAKPERESTEI 77
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 29.9 bits (64), Expect = 2.8
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Query: 170 DSQCMCEICGQMFRCMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHS 229
DSQ + + F S +D DA + +S+EC +C F +S H H
Sbjct: 288 DSQSILPVASITFSSHSRDQDETDADDINSYECQQCNLTFHGQSAY-----AHHLITFHK 342
Query: 230 CAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQ 268
R+ + + + V KF+C +C K F++
Sbjct: 343 MGSKRRKIN---KVGKFGEPVIGKDGKFECPVCNKTFEE 378
>06_03_1478 - 30420097-30420651
Length = 184
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Query: 89 SGHALDTHMSLSTKHNKSLDTSIRRRVHKKASDHKRPAHHKPPEGPIPCEQCDMELPNAR 148
SG TH LS K + +D ++ K A A G PC CD P +
Sbjct: 14 SGGDDPTHPWLSLKSSHEMDDAVASWREKLAD----MAAADERAGRYPCPLCDRHFPTEK 69
Query: 149 RYDRHFRKLHPGK 161
H R HPG+
Sbjct: 70 AVHGHMRS-HPGR 81
>06_01_0431 + 3066701-3067729
Length = 342
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 187 LLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATR 225
L +DH DA +SS + GE PRR+RL++HE +H R
Sbjct: 44 LCRDH-DATDSSGDDDGEDDA--PRRARLLVHE-IHVAR 78
>05_05_0117 + 22503271-22503891
Length = 206
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 200 FECGECGKRFPRRSRLVIHERVHATRPLH 228
FEC CG+RFP L H H RP H
Sbjct: 41 FECRTCGRRFPTFQALGGHRASH-KRPRH 68
>04_04_1028 +
30230224-30231274,30231500-30231609,30232144-30232170,
30233107-30234252
Length = 777
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 170 DSQCMCEICGQMFRCMSLLKDHYDAHNSSSFECGEC 205
+S CM G+ + C K YD HN + +E G C
Sbjct: 316 ESSCMDRFMGEGYVCRC--KAGYDQHNGNPYEAGGC 349
>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 172 QCMCEICGQMFRCMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCA 231
+C+C+ICG++ L + + EC +C +++ + I+ ++ CA
Sbjct: 1085 RCLCDICGEVINLKEL------RSSLPALECAQCERQYHAK---CIYGKLLCNEEGGPCA 1135
Query: 232 -ICGRRF-TVYANMIRHRDSVHMN-LKKFDCNL 261
CGRR +Y N +R R + ++ + F C +
Sbjct: 1136 WFCGRRCQQIYMN-LRSRVGIPIHTIDGFSCTV 1167
>03_05_0291 - 22837412-22838128
Length = 238
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 201 ECGECGKRFPRRSRLVIHERVHATRPLHS---CAICGRRF 237
EC C K FP L H+R H P+ S A+ GR F
Sbjct: 156 ECSVCKKTFPTGQALGGHKRCHYEGPIGSGGGAAVAGRGF 195
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 188 LKDHYDA-HNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRF 237
L+ HY H + F C C KRF R HE+ + R L CA CG F
Sbjct: 235 LQTHYRRRHGARDFACRRCAKRFAVRGDWRTHEK-NCGR-LWRCA-CGAHF 282
>01_06_1284 + 35994595-35995074
Length = 159
Score = 29.5 bits (63), Expect = 3.8
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 200 FECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHRDSVHMNLKKFDC 259
FEC C KRFP L H H TR L + + A R R VH +C
Sbjct: 35 FECKTCSKRFPSFQALGGHRTSH-TR-LQAKLLSDPAAAAAAAAERDRARVH------EC 86
Query: 260 NLCGKKFKQLCGLRTHI 276
+CG +F L H+
Sbjct: 87 AVCGVEFSMGQALGGHM 103
>12_02_0916 - 24271151-24271894
Length = 247
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 201 ECGECGKRFPRRSRLVIHERVHATRPLHSCAICG 234
EC CGK FP L H+R H + S A G
Sbjct: 156 ECNVCGKAFPTGQALGGHKRCHYDGTIGSAAGAG 189
>06_02_0069 - 11126235-11127538,11128361-11128421
Length = 454
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 191 HYDAHNSSSFECG-ECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFT--VYANMIRHR 247
+YD HN E K + S L H V+ + +F+ +Y N+
Sbjct: 306 YYDGHNDKYMVLNYEAMKLKKKTSDLYQHSEVNGIDKKPKLKLAKNKFSRSIYGNLAHGH 365
Query: 248 DSVHMNLKKF 257
D VH+ KKF
Sbjct: 366 DHVHLAKKKF 375
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 188 LKDHY-DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFT 238
+K H+ H ++C +C KR+ +S H ++ TR + C CG F+
Sbjct: 159 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKICGTRE-YRCD-CGTLFS 208
>11_08_0067 - 28135216-28135728
Length = 170
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 219 ERVHATRPLHSCAICGRRFTVYANMIRHRDS 249
+RVH C CGRRF+ + + HR S
Sbjct: 36 KRVHLDGGAFQCRTCGRRFSTFQALGGHRTS 66
>11_04_0218 +
14983132-14984658,14984762-14984869,14984964-14985125,
14985270-14985275
Length = 600
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 30 SYMSHLRTKHPSDIVCALCGHSFVSKKGLVLHTNFKHKFHSKTVPKDGPACEECNIVFVS 89
S + HLR KHP D+ +V+ K L T KF ++ +DG +C + + F S
Sbjct: 405 SLLEHLRNKHPDDL--------WVNLKSF-LDTKLCGKFKTENASQDGYSCHDEMLQFQS 455
>04_04_0037 + 22309681-22310532,22310638-22310977,22311613-22311749
Length = 442
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 83 CNIVFVSGHALDTHMSLSTKHNKSLDTSIRRRVHKKASDHKRPAHHKPPEGPI 135
C++ V+G + H + H TS+ + H A+ + + H+ P PI
Sbjct: 286 CSLSLVTGLLICLHSAAKITHKTQAITSVAAQWHADATINSQERDHENPRTPI 338
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 188 LKDHY-DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H ++C +C K++ +S H + +R + C CG F+ + I H
Sbjct: 111 IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGSRE-YRCD-CGTLFSRRDSFITH 168
Query: 247 R 247
R
Sbjct: 169 R 169
>12_02_0943 -
24662147-24662195,24662440-24662834,24662979-24663057,
24663129-24663250,24663363-24663449,24663543-24663891,
24664227-24664540
Length = 464
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 41 SDIVCALCGHSFVSKKGLVLHTNFKHKFHSKTVPKDGPACEECNI-VFVSGHALDTH 96
S+I+C +CG F S+ L + KHK K C+ C + +G L+ H
Sbjct: 370 SEILCLMCGSPF-SESELQNLESTKHKAQKKIDLYTAHCCQSCYFQILPAGENLNEH 425
>12_02_0133 -
14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 131 PEGPIPCEQCDMELPNARRYDRHFRKLHPGKNRTKFF 167
PEG CE+C+ EL ++ +L G ++++FF
Sbjct: 265 PEGEWLCEECENELEYEKKKKLEKSQLKVGASKSQFF 301
>07_03_1548 +
27630988-27631049,27631632-27631767,27631904-27632041,
27632168-27632267,27632443-27632552
Length = 181
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 69 HSKTVPKDGPACEECNIVFVSGHALDTHMSLSTKHNKSLDTSIRRRVHKKASDHKRPAHH 128
HS ++ CE C + V +D H H + + ++ V ++ D +
Sbjct: 33 HSAHCARNLQKCEHCGYM-VPKKLMDEHYD--ENHAPMICSLCQKTVQRELWDLHKGL-- 87
Query: 129 KPPEGPIPCEQCDMELPNARRYD 151
+ P+ + C+ CD ELP A Y+
Sbjct: 88 QCPQRMLACQYCDFELPAADIYE 110
>04_01_0354 - 4646826-4647314
Length = 162
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/69 (27%), Positives = 25/69 (36%)
Query: 80 CEECNIVFVSGHALDTHMSLSTKHNKSLDTSIRRRVHKKASDHKRPAHHKPPEGPIPCEQ 139
C C F S AL HM++ + L R H + + P PP P P +Q
Sbjct: 48 CGYCRREFRSAQALGGHMNVHRRERARLRQFPNPRPHPLPNLNLSPPPPPPPPPPPPQQQ 107
Query: 140 CDMELPNAR 148
P R
Sbjct: 108 QQCYCPGDR 116
>04_01_0082 +
897026-897028,897101-897350,898454-898608,898686-898967,
899078-899160,899335-899485,899896-899952,900279-900479
Length = 393
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 247 RDSVHMNLKKFDCNLCGKKFKQLCGLRTHIDCYHH 281
R V K F C+LC K++K +H+ Y H
Sbjct: 192 RSEVKEIQKVFFCSLCNKQYKLAHEFESHLSSYDH 226
>03_05_0255 + 22435027-22435072,22436022-22437085
Length = 369
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 259 CNLCGKKFKQLCGLRTHIDCYHHKQPWPKRNRKKASNNPTPVTSAS 304
C LC K F C L H++ H K+ + P+T AS
Sbjct: 26 CKLCNKSFPSYCSLGGHMNL--HSTRRRKKKPPPSPRKAPPITGAS 69
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.134 0.441
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,391,375
Number of Sequences: 37544
Number of extensions: 457407
Number of successful extensions: 1923
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1782
Number of HSP's gapped (non-prelim): 181
length of query: 320
length of database: 14,793,348
effective HSP length: 82
effective length of query: 238
effective length of database: 11,714,740
effective search space: 2788108120
effective search space used: 2788108120
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -