Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001741-TA|BGIBMGA001741-PA|IPR007087|Zinc finger,
C2H2-type
(320 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 52 4e-07
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 44 2e-04
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 40 0.003
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 39 0.005
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 38 0.007
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 36 0.048
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 35 0.083
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 34 0.11
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 34 0.15
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 33 0.19
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 33 0.34
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 33 0.34
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 33 0.34
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 32 0.44
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 32 0.44
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 32 0.44
At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein ... 32 0.59
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 31 0.78
At3g02860.2 68416.m00279 expressed protein 31 0.78
At3g02860.1 68416.m00278 expressed protein 31 0.78
At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 31 0.78
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 31 1.0
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 31 1.0
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 31 1.0
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 31 1.0
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 31 1.4
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 31 1.4
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 31 1.4
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 31 1.4
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 30 1.8
At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein ... 30 1.8
At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein ... 30 2.4
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 30 2.4
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 30 2.4
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 30 2.4
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 30 2.4
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 29 3.1
At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein ... 29 3.1
At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein ... 29 3.1
At1g72570.1 68414.m08392 ovule development protein, putative sim... 29 3.1
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 29 3.1
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 29 4.1
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 29 4.1
At3g45170.1 68416.m04875 zinc finger (GATA type) family protein ... 29 4.1
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 29 4.1
At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein ... 29 4.1
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 29 4.1
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 29 4.1
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 29 5.5
At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein ... 28 7.2
At2g44380.1 68415.m05520 DC1 domain-containing protein highly si... 28 7.2
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 28 7.2
At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains ... 28 7.2
At3g53500.2 68416.m05907 zinc knuckle (CCHC-type) family protein... 28 9.6
At3g53500.1 68416.m05906 zinc knuckle (CCHC-type) family protein... 28 9.6
At2g03370.1 68415.m00296 hypothetical protein contains Pfam prof... 28 9.6
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 52.4 bits (120), Expect = 4e-07
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 173 CMCEICGQMFRCMSLLKDHYDAHNSSSFECGE--CGKRFPRRSRLVIHERVHATRPLHSC 230
C + CG+ F +S L+ H H + C + CGK+F S+L H +H + C
Sbjct: 81 CSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYIC 140
Query: 231 AI--CGRRFTVYANMIRHRDSVHMNLKKFDCNL--CGKKFKQLCGLRTHIDCYHHK 282
CG+ F++ N+ H + H C C K++ L+ H+ YH K
Sbjct: 141 TYEGCGKAFSLDFNLRSHMKT-HSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEK 195
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 175 CEICGQMFRCMSLLKDHYDAHN--SSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAI 232
C+ICG+ F C L H H E + +PR+S+L +R ++ + C +
Sbjct: 45 CKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKL--QKRPESSSSCYECKV 102
Query: 233 CGRRFTVYANMIRHRDSVHMNLKK 256
CG+ F Y + H +H + K+
Sbjct: 103 CGKIFGCYRGLGGH-TKLHRSTKR 125
Score = 37.5 bits (83), Expect = 0.012
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 184 CMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFT-VYAN 242
C ++ + + SS +C CGK F L H+R+H RP+ + + F+ VY
Sbjct: 27 CSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIH--RPIKE-KLSKQEFSEVYPR 83
Query: 243 MIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTH 275
+ + + ++C +CGK F GL H
Sbjct: 84 KSKLQKRPESSSSCYECKVCGKIFGCYRGLGGH 116
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 152 RHFRKLHPGKNRTKFFTEDSQ-CM-CEICGQMFRCMSLLKDHYDAHNSSSFE 201
+ F +++P K++ + E S C C++CG++F C L H H S+ E
Sbjct: 75 QEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRE 126
Score = 31.1 bits (67), Expect = 1.0
Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 18/139 (12%)
Query: 74 PKDGPACEECNI---VFVSGHALDTHMSL--STKH--------NKSLDTSIRRRVHKKAS 120
P+ +C EC + +F L H L STK N LD+S +++ + S
Sbjct: 91 PESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPS 150
Query: 121 DHKRPAHHKPPEGPIPCEQCDMELPNARRYDRHFRKLHPGKNRTKFFTEDSQCMCEICGQ 180
K K + C + + + K +TK + S C C+ICG+
Sbjct: 151 SFKVSQEEKF----LHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSS-CHCKICGK 205
Query: 181 MFRCMSLLKDHYDAHNSSS 199
F C L +H H S
Sbjct: 206 SFVCSQGLGNHKRVHREIS 224
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 198 SSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFT 238
SS C CGK F L H+RVH R + C R++T
Sbjct: 196 SSCHCKICGKSFVCSQGLGNHKRVH--REISGKLACKRKYT 234
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 175 CEICGQMFRCMSLLKDHYDAHN-SSSFEC--GECGKRFPRRSRLVIHERVHATRPLHSC- 230
C+ CG F+ + LK H +H+ SF C +C + R+ L H H + L C
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKGK-LFKCP 126
Query: 231 -AICGRRFTVYANMIRHRDSVHMN 253
C F+V N+ RH H N
Sbjct: 127 KENCKSEFSVQGNVGRHVKKYHSN 150
Score = 35.9 bits (79), Expect = 0.036
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Query: 193 DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAI--CGRRFTVYANMIRHRDSV 250
D +SS+ C ECG F + + L H + H+ +C + C + ++ RH +
Sbjct: 59 DEESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTH 118
Query: 251 HMNLKKFDCNLCGKKFKQLCGLRTHIDCYHHKQPWPKRN 289
L K C +F + H+ YH K N
Sbjct: 119 KGKLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDN 157
Score = 35.5 bits (78), Expect = 0.048
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 12/123 (9%)
Query: 168 TEDSQCMC-EI-CGQMFRCMSLLKDHYDAH---NSSSFECGE--CGKRFPRRSRLVIHER 220
T Q +C EI CG+ F+ S L+ H D+H +S C E C K F L H
Sbjct: 210 TGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSH-- 267
Query: 221 VHATRPLHSCAICGRRF---TVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHID 277
+ + +C ICG + + ++ H + K + C F + L+ H+
Sbjct: 268 IRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMK 327
Query: 278 CYH 280
H
Sbjct: 328 AVH 330
Score = 32.7 bits (71), Expect = 0.34
Identities = 27/93 (29%), Positives = 34/93 (36%), Gaps = 12/93 (12%)
Query: 80 CEECNIVFVSGHALDTHMSLSTKHNKSLDTSIRRRVHKKASDHKRPAH-------HKPPE 132
C+EC F L HM + SL+ S V A+ ++R H HK
Sbjct: 68 CQECGAEFKKPAHLKQHMQ-----SHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKGKL 122
Query: 133 GPIPCEQCDMELPNARRYDRHFRKLHPGKNRTK 165
P E C E RH +K H NR K
Sbjct: 123 FKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDK 155
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 162 NRTKFFTEDSQCMCEICGQMFRCMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERV 221
+ K + ++ C C + F LK H + + C CG + +++ + H R
Sbjct: 238 SHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQH-INCEICGSKHLKKN-IKRHLRT 295
Query: 222 HA--TRPLH-SCAI--CGRRFTVYANMIRHRDSVHMNLKKFDCNL--CGKKF 266
H + P C + C F+ +N+ +H +VH +++ F C CG +F
Sbjct: 296 HDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRF 347
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Query: 198 SSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHRDSVHMNLKKF 257
+SF C C K FP L H R+H +S G + + + H ++
Sbjct: 7 NSFLCKYCYKTFPSGKALGGHIRIHTNE--NSVGYNGNKKKRLVDQRKMMAQKHKQQQQV 64
Query: 258 DCNLCGKKFKQLCGLRTHIDCY 279
C CG+ F L LR H+ C+
Sbjct: 65 GCRECGRVFVSLKALRGHMACH 86
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 168 TEDSQCMCEICGQMFRCMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPL 227
T ++C E C F + L+ H N + E CGK+F LV+H+RVH
Sbjct: 1212 THPNRCYLEGCKMTFESKAKLQTH--KRNRCTHE--GCGKKFRAHKYLVLHQRVHKDERP 1267
Query: 228 HSCAICGRRFTVYANMIRHRD-SVHMNLKKFDCNL--CGKKFKQLCGLRTH 275
C+ G T R +H + + C + CG F+ + H
Sbjct: 1268 FECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRH 1318
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 35.5 bits (78), Expect = 0.048
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 12/123 (9%)
Query: 168 TEDSQCMC-EI-CGQMFRCMSLLKDHYDAH---NSSSFECGE--CGKRFPRRSRLVIHER 220
T Q +C EI CG+ F+ S L+ H D+H +S C E C K F L H
Sbjct: 122 TGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSH-- 179
Query: 221 VHATRPLHSCAICGRRF---TVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHID 277
+ + +C ICG + + ++ H + K + C F + L+ H+
Sbjct: 180 IRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMK 239
Query: 278 CYH 280
H
Sbjct: 240 AVH 242
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 162 NRTKFFTEDSQCMCEICGQMFRCMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERV 221
+ K + ++ C C + F LK H + + C CG + +++ + H R
Sbjct: 150 SHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQH-INCEICGSKHLKKN-IKRHLRT 207
Query: 222 HA--TRPLH-SCAI--CGRRFTVYANMIRHRDSVHMNLKKFDCNL--CGKKF 266
H + P C + C F+ +N+ +H +VH +++ F C CG +F
Sbjct: 208 HDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRF 259
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 34.7 bits (76), Expect = 0.083
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 188 LKDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHR 247
L H ++H S+ FEC C KRF L H H +P + TV ++H
Sbjct: 35 LNQHTESHTSNQFECKTCNKRFSSFQALGGHRASH-KKP---------KLTVEQKDVKHL 84
Query: 248 DSVHMNLKKFDCNLCGKKF 266
+ + C++C + F
Sbjct: 85 SNDYKGNHFHKCSICSQSF 103
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 160 GKNRTKFFTEDSQCMCEICGQMFRCMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHE 219
G N+ T + CE CG++F+ L H +H + + +RS
Sbjct: 160 GYNKINRATTKGRYKCETCGKVFKSYQALGGHRASHKKNRVS----NNKTEQRSETEYDN 215
Query: 220 RVHATRPLHSCAICGRRF 237
V + +H C IC R F
Sbjct: 216 VVVVAKRIHECPICLRVF 233
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 33.9 bits (74), Expect = 0.15
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 185 MSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMI 244
+S L DH ++C CGK FP L H+ H +P+ S + TV N
Sbjct: 84 LSPLSDH-----QKDYKCSVCGKSFPSYQALGGHKTSH-RKPV-SVDVNNSNGTVTNNGN 136
Query: 245 RHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHIDCYH 280
V + K +C++C K F L H C++
Sbjct: 137 ISNGLVGQSGKTHNCSICFKSFPSGQALGGHKRCHY 172
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 189 KDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHR 247
K +Y H ++C +C KR+ +S H + T+ + C CG F+ + I HR
Sbjct: 146 KHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKE-YRCD-CGTLFSRRDSFITHR 202
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 188 LKDHYDA-HNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K HY H ++C +C K++ +S H + TR + C CG F+ + I H
Sbjct: 146 IKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTRE-YKCD-CGTLFSRKDSFITH 203
Query: 247 R 247
R
Sbjct: 204 R 204
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 188 LKDHYDAHNSS--SFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIR 245
+K H+ +S+ + C C K + +S H + TR HSC CGR F+ + I
Sbjct: 131 IKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRG-HSCD-CGRVFSRVESFIE 188
Query: 246 HRDS 249
H+D+
Sbjct: 189 HQDN 192
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 189 KDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHR 247
K +Y H ++C +C KR+ +S H + T+ + C CG F+ + I HR
Sbjct: 147 KHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKE-YRCD-CGTIFSRRDSYITHR 203
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 32.3 bits (70), Expect = 0.44
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 202 CGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHRDSVHMNLKKFDCNL 261
C ECGKRF L H+R+H L + R + + M+ + + + C +
Sbjct: 81 CCECGKRFVSGKALGGHKRIHV---LETRKFSMMRPKMVSGMVGRSERGDLEVA---CCV 134
Query: 262 CGKKFKQLCGLRTHIDCYHHKQPW 285
C KKF + L H+ +H + W
Sbjct: 135 CYKKFTSMKALYGHMR-FHPDRGW 157
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 189 KDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHR 247
K +Y H ++C +C KR+ +S H + T+ + C CG F+ + I HR
Sbjct: 148 KHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKE-YRCD-CGTIFSRRDSYITHR 204
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 188 LKDHYDAHNSSSFE--CGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIR 245
+K H+ +S+ + C C K + +S H + TR HSC CGR F+ + I
Sbjct: 134 IKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLKTCGTRG-HSCD-CGRVFSRVESFIE 191
Query: 246 HRDS 249
H+D+
Sbjct: 192 HQDT 195
>At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 427
Score = 31.9 bits (69), Expect = 0.59
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 16/97 (16%)
Query: 169 EDSQCMCEICGQMFRCMSL--LKDHYDAHNSSSFECGECGKRFPRRSRLVIH-------- 218
E + C I G R SL +DHY+A +++S C C + +P L IH
Sbjct: 140 ETRRISCPIVGCPERLKSLDHFEDHYNARHTAS--CSVCSRVYPTSRLLSIHISEAHDSF 197
Query: 219 --ERVHATRPLHSCAI--CGRRFTVYANMIRHRDSVH 251
+V ++ C + CG +F Y RH H
Sbjct: 198 FQAKVSRGYDMYECLVEGCGLKFKTYKARHRHLIDKH 234
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 31.5 bits (68), Expect = 0.78
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 6/112 (5%)
Query: 169 EDSQCMCEICGQMFRCMSLLKD-HYDAHNSSSFECGECGKRFPRRSRLVIHERVHA-TRP 226
E+ +C C MS + H + CGK F LV H+RVH+ RP
Sbjct: 1230 EEEECAAYQCNMEGCTMSFSSEKQLMLHKRNICPIKGCGKNFFSHKYLVQHQRVHSDDRP 1289
Query: 227 LHSCAICGRRFTV-YANMIRHRDSVHMNLKKFDCNL--CGKKFKQLCGLRTH 275
L C G + T +A VH + + C CG+ F+ + H
Sbjct: 1290 L-KCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRH 1340
>At3g02860.2 68416.m00279 expressed protein
Length = 313
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 76 DGPACEECNIVFVSGHALDTHMSLSTKHNKSLDT 109
D P C CN+V S D H + S KH++++D+
Sbjct: 35 DQPVCRVCNVVLKSESLWDVHQA-SRKHHEAIDS 67
>At3g02860.1 68416.m00278 expressed protein
Length = 312
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 76 DGPACEECNIVFVSGHALDTHMSLSTKHNKSLDT 109
D P C CN+V S D H + S KH++++D+
Sbjct: 35 DQPVCRVCNVVLKSESLWDVHQA-SRKHHEAIDS 67
>At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 156
Score = 31.5 bits (68), Expect = 0.78
Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 17/81 (20%)
Query: 176 EICGQMFRCMSLL-KDHYDAHNSSSFECGECGKRFPRRSRLVIHERVH------------ 222
E+ M C+ LL K H + S F C C K FP L H H
Sbjct: 9 EMINNMANCLILLSKAHQNDTKSRVFACKTCNKEFPSFQALGGHRASHRRSAALEGHAPP 68
Query: 223 ---ATRPL-HSCAICGRRFTV 239
+P+ H C ICG F V
Sbjct: 69 SPKRVKPVKHECPICGAEFAV 89
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 188 LKDHY-DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H ++C +C K++ +S H ++ T+ + C CG F+ + I H
Sbjct: 126 IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKE-YKCD-CGTLFSRRDSFITH 183
Query: 247 R 247
R
Sbjct: 184 R 184
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 11/95 (11%)
Query: 202 CGECGKRFPRRSRLVIHERVHATRPLHS--CAICGRRFTVYANMIRHRDSV-HM---NLK 255
C C K F RR LV H ++ + LH C +C + + ++ H + H+ N K
Sbjct: 19 CVACYKMFNRREHLVEHMKI-SYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
Query: 256 ----KFDCNLCGKKFKQLCGLRTHIDCYHHKQPWP 286
K C LC + F++ L H + H P P
Sbjct: 78 AIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP 112
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 228 HSCAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHIDCYHH 281
H C C + F +++ H + +L + C +C K K +R H++ H
Sbjct: 17 HRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDH 70
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 11/95 (11%)
Query: 202 CGECGKRFPRRSRLVIHERVHATRPLHS--CAICGRRFTVYANMIRHRDSV-HM---NLK 255
C C K F RR LV H ++ + LH C +C + + ++ H + H+ N K
Sbjct: 19 CVACYKMFNRREHLVEHMKI-SYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
Query: 256 ----KFDCNLCGKKFKQLCGLRTHIDCYHHKQPWP 286
K C LC + F++ L H + H P P
Sbjct: 78 AIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP 112
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 228 HSCAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHIDCYHH 281
H C C + F +++ H + +L + C +C K K +R H++ H
Sbjct: 17 HRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDH 70
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 188 LKDHY-DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H ++C +C KR+ +S H + TR + C CG F+ + I H
Sbjct: 133 IKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTRE-YRCD-CGTIFSRRDSFITH 190
Query: 247 R 247
R
Sbjct: 191 R 191
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 188 LKDHY-DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H ++C +C K++ +S H ++ T+ + C CG F+ + I H
Sbjct: 124 IKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKE-YKCD-CGTLFSRRDSFITH 181
Query: 247 R 247
R
Sbjct: 182 R 182
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 188 LKDHYDA-HNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H ++C +C K++ S H ++ T+ + C CG F+ + I H
Sbjct: 132 IKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICGTKE-YRCD-CGTLFSRKDSFITH 189
Query: 247 R 247
R
Sbjct: 190 R 190
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 259 CNLCGKKFKQLCGLRTHIDCYHHKQPWPKRNRKKASNNPTPVTS-ASIDNDTWEPKK 314
C CGK+F L L H+ C H ++ W R SN + S A+ + +W+P +
Sbjct: 67 CTECGKQFGSLKALFGHMRC-HPERQW--RGINPPSNFKRRINSNAASSSSSWDPSE 120
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 188 LKDHYDAHNS--SSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIR 245
+K H+ +S + C C K + +S H + +R HSC CGR F+ + I
Sbjct: 104 IKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKTCGSRG-HSCD-CGRVFSRVESFIE 161
Query: 246 HRDS 249
H+D+
Sbjct: 162 HQDT 165
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 218 HERVHATRPLHSCAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHID 277
++R H +P C CG+ F V + H + K + C +CG FK L+ HI
Sbjct: 292 YKRKHGIKPF-MCRKCGKAFAVRGDWRTHEKNCG---KLWYC-ICGSDFKHKRSLKDHIK 346
Query: 278 CY 279
+
Sbjct: 347 AF 348
>At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 251
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 67 KFHSKTVPKDGP-ACEECNIVFVSGHALDTHMSLSTKHNKSLDTSIRRRVHKKASDHK 123
+ HS K GP C +CN +F + HMS K + + + R R K K
Sbjct: 157 RIHSLPYKKYGPYTCPKCNSIFDTSQKFAAHMSSHYKSETNKERAQRFRARNKRKYRK 214
>At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 324
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 69 HSKTVPKDGP-ACEECNIVFVSGHALDTHMSLSTKHNKSLDTSIRR 113
HS K GP C +CN VF + H+S N+S++ +R
Sbjct: 236 HSLPYEKYGPYTCPKCNSVFDTSQKFAAHISSMHYKNESIEEKFKR 281
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 188 LKDHY-DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H ++C +C K++ +S H + T+ + C CG F+ + I H
Sbjct: 163 IKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTCGTKE-YRCD-CGTLFSRRDSFITH 220
Query: 247 R 247
R
Sbjct: 221 R 221
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 175 CEICGQMFRCMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICG 234
CE CG++F+ L H +H + C ++ L + E + +H C IC
Sbjct: 196 CETCGKVFKSYQALGGHRASHKKNK-ACMTKTEQVETEYVLGVKE-----KKVHECPICF 249
Query: 235 RRFTVYANMIRHRDSVHMNL 254
R FT + H+ S N+
Sbjct: 250 RVFTSGQALGGHKRSHGSNI 269
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 197 SSSFECGECGKRFPRRSRLVIHERVHATRP 226
S S++C CG+ P L H+ H T+P
Sbjct: 747 SDSYQCNVCGRELPSYQALGGHKASHRTKP 776
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 230 CAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHIDCYHHKQPWPKRN 289
C C R F +++H+ + H F C++C KK G+ H+ HK+ K
Sbjct: 14 CYYCDREFDDEKILVQHQKAKH-----FKCHVCHKKLSTASGMVIHV-LQVHKENVTKVP 67
Query: 290 RKKASNNPTPV 300
K + T +
Sbjct: 68 NAKDGRDSTDI 78
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Query: 32 MSHLRTKHPSDIVCALCGHSFVSKKGLVLHTNFKHKFHSKTVP--KDGPACEECNIVFVS 89
+ H + KH C +C + G+V+H HK + VP KDG + I +
Sbjct: 28 VQHQKAKH---FKCHVCHKKLSTASGMVIHVLQVHKENVTKVPNAKDGRDSTDIEIYGMQ 84
Query: 90 G---HALDTH 96
G H L H
Sbjct: 85 GIPPHVLTAH 94
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 156 KLHPGKNRTK---FFTEDSQCMCEICGQMFRCMSLLKDHYDA-HNSSSFECGECGKRFPR 211
K KN+ K + + C+ + ++ +K H+ H ++C +C K++
Sbjct: 35 KQKTNKNQVKKKVYICPEKSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAV 94
Query: 212 RSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHR 247
S H ++ +R C CG F+ + I HR
Sbjct: 95 ISDWKAHNKICGSREFR-CD-CGTLFSRKDSFISHR 128
>At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 170
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 7/86 (8%)
Query: 80 CEECNIVFVSGHALDTHMSLSTKHNKSLDTSIRRRVHKKASDHKRPAHHKPPEGPIPCEQ 139
C+ C F S AL H + +K S D S+ KK H C
Sbjct: 38 CKTCERDFDSFQALGGHRASHSKLTNSDDKSLPGSPKKKPKTTTTTTAHT-------CPI 90
Query: 140 CDMELPNARRYDRHFRKLHPGKNRTK 165
C +E P + H RK K R K
Sbjct: 91 CGLEFPMGQALGGHMRKHRNEKEREK 116
>At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 329
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 69 HSKTVPKDGP-ACEECNIVFVSGHALDTHMSLSTKHNKSLDTSIRRRVHKK 118
HS K GP C +CN VF + HMS K+ S + R R K
Sbjct: 234 HSLPYEKYGPYTCPKCNGVFNTSQKFAAHMSSHYKNETSEEREQRIRAKNK 284
>At1g72570.1 68414.m08392 ovule development protein, putative
similar to ovule development protein AINTEGUMENTA
(GI:1209099) [Arabidopsis thaliana];contains Pfam
profile: PF00847 AP2 domain (2 copies); contains
non-consensus TA acceptor splice site at exon 4
Length = 425
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 211 RRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLC 270
+R RLV+ +V + P S G+R + Y + RHR + +D N C K+ +
Sbjct: 205 KRKRLVVKPQVKESVPRKSVDSYGQRTSQYRGVTRHRWTGRYEAHLWD-NSCKKEGQTRR 263
Query: 271 GLRTHIDCYHHKQ 283
G + I Y ++
Sbjct: 264 GRQAKIGGYDEEE 276
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 188 LKDHYDA-HNSSSFECGECGKRFPRRSRLVIHER 220
L+ HY H S F CG+CGK + HE+
Sbjct: 252 LQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEK 285
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 232 ICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHI 276
+CG+RF + + +H+ +F C++C K F + ++ H+
Sbjct: 160 VCGKRFWIPSPA-----QIHVGPMQFACSICSKTFNRYNNMQMHM 199
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 228 HSCAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHI 276
+ C C R+F +++ H + ++ + C +C K + LR H+
Sbjct: 6 NKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHL 54
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 201 ECGECGKRFPRRSRLVIHERVHATRPLH--SCAICGRRFTVYANMIRH 246
+CG C ++F ++ LV H R+ + +H +C IC + + ++ H
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRI-SYHSVHEPTCGICNKHCRSFDSLREH 53
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 29.1 bits (62), Expect = 4.1
Identities = 31/137 (22%), Positives = 51/137 (37%), Gaps = 8/137 (5%)
Query: 174 MCEICGQMFRCMSLLKDHYDAHNS-SSFECGECGKRFPRRSRLVIHERVHATRPLHSC-- 230
M E ++ C+ +L + + +S FECG C K F L H H + + C
Sbjct: 135 MSEEDHEVASCLLMLSNGTPSSSSIERFECGGCKKVFGSHQALGGHRASH--KNVKGCFA 192
Query: 231 --AICGRRFTVYANMIR-HRDSVHMNLKKFDCNLCGKKFKQLCGLRTHIDCYHHKQPWPK 287
+ TV + H+ + CN+C + F L H+ C+ K+ P
Sbjct: 193 ITNVTDDPMTVSTSSGHDHQGKILTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEEPM 252
Query: 288 RNRKKASNNPTPVTSAS 304
+ N P + S
Sbjct: 253 ISGALDLNVPPTIQDLS 269
>At3g45170.1 68416.m04875 zinc finger (GATA type) family protein
contains GATA-type zinc finger domain,
INTERPRO:IPR000679
Length = 204
Score = 29.1 bits (62), Expect = 4.1
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 81 EECNIVFVSGHALDTHMSLSTKHNKSLDTSIRRRVH-KKASDHKRPAHHKPPEGPIPCEQ 139
E+ N++ DT+ S +++ +L T+ R R+H K S +KR K P +
Sbjct: 47 EDSNLLLEESREFDTNDSKPSRNFSNLPTATRGRLHAPKRSGNKR-GRQKRLSFKSPSDL 105
Query: 140 CDMELPNARRYDRHFRKLHPGKNRTKFFTEDSQ---CMCEICGQMFRCMSLLKDHYDA 194
D + D+ H G +T + E + +C CG +R LL ++ A
Sbjct: 106 FDSKFGIT---DKSCS--HCGTRKTPLWREGPRGAGTLCNACGMRYRTGRLLPEYRPA 158
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 228 HSCAICGRRFTVYANMIRHRDSVHMNLKKFDCNLCGKKFKQLCGLRTHI 276
+ CA C R+F +++ H + + + C +C K + LR H+
Sbjct: 15 NKCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREHL 63
>At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 257
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 193 DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHS 229
D +N+ FEC C + FP L H+ H H+
Sbjct: 88 DNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHA 124
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 189 KDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRHR 247
K + H ++C +C K++ +S H + T+ + C CG F+ + I HR
Sbjct: 158 KHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKE-YKCD-CGTLFSRRDSFITHR 214
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 175 CEICGQMFRCMSLLKDHYDAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICG 234
CE C ++F+ L H +H E + G ++ ++ +T H C IC
Sbjct: 162 CETCEKVFKSYQALGGHRASHKKKIAETDQLGSDELKK------KKKKSTSSHHECPICA 215
Query: 235 RRFT 238
+ FT
Sbjct: 216 KVFT 219
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 188 LKDHY-DAHNSSSFECGECGKRFPRRSRLVIHERVHATRPLHSCAICGRRFTVYANMIRH 246
+K H+ H ++C +C K + +S H ++ TR + C CG F+ I H
Sbjct: 146 IKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKICGTRD-YRCD-CGTLFSRKDTFITH 203
Query: 247 R 247
R
Sbjct: 204 R 204
>At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 364
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 129 KPPEGPIPCEQCDMELPNARRYDRHFRKLHPGKNRTK 165
KPPE P C CD + HF+++H +N+ +
Sbjct: 112 KPPE-PYFCGVCDRRFYTNEKLINHFKQIHETENQKR 147
>At2g44380.1 68415.m05520 DC1 domain-containing protein highly
similar to GP|2435515|AF024504; contains Pfam profile
PF03107: DC1 domain
Length = 247
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 149 RYDRHFRKLHPGKNRTKFFTEDSQCMCEICGQMFRCMSLLKDHYDAHNSSSFECGECGKR 208
R+ H L K R + S C E+ GQ F+CM D++ + K
Sbjct: 13 RHASHNHPLRVFKARDEDEVVCSGCELELTGQAFKCMKSDCDYFLHKSCFDLPRETNHKS 72
Query: 209 FPRRSRLVIHERVHATRPLHSCAICG 234
P S ++H + ++C CG
Sbjct: 73 HPNHSLTLLHSPPYGQS--YTCDACG 96
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 213 SRLVIHERVHATRPLHS--CAICGRRFTVYANMIRHRDSVHM 252
S++V+ + T +H C CG +F + ++ RH + HM
Sbjct: 582 SQIVVSQNNENTSGVHKFVCKFCGLKFNLLPDLGRHHQAEHM 623
>At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains
Pfam PF02176: TRAF-type zinc finger; similar to TNF
receptor associated factor 4 (GI:7274404) [Mus musculus]
(GI:7274404); similar to Cysteine rich motif Associated
to Ring and Traf domains protein (mCART1)(GI:1041446)
[Mus musculus]
Length = 192
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 202 CGECGKRFPRRSRLVIHERVHATRPLHSCAICG 234
C C + P + + +H RVH R L C ICG
Sbjct: 12 CNHCDRDIPSLN-IDLH-RVHCARNLEKCKICG 42
>At3g53500.2 68416.m05907 zinc knuckle (CCHC-type) family protein
contains Pfam domain PF00098: Zinc knuckle
Length = 284
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 270 CGLRTHIDCYHHKQPWPKRNRKKASNNPTPVTSAS 304
CG R HI+ P PK+ R+ S + +PV S S
Sbjct: 126 CGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRS 160
>At3g53500.1 68416.m05906 zinc knuckle (CCHC-type) family protein
contains Pfam domain PF00098: Zinc knuckle
Length = 243
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 270 CGLRTHIDCYHHKQPWPKRNRKKASNNPTPVTSAS 304
CG R HI+ P PK+ R+ S + +PV S S
Sbjct: 85 CGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRS 119
>At2g03370.1 68415.m00296 hypothetical protein contains Pfam profile
PF04577: Protein of unknown function (DUF563)
Length = 458
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 282 KQPWPKRNRKKASNNPTPVTSASIDND 308
+QPW R K+A P TSA+I D
Sbjct: 51 QQPWESRRIKQAPQQPQETTSATITCD 77
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.134 0.441
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,410,702
Number of Sequences: 28952
Number of extensions: 371474
Number of successful extensions: 1679
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1539
Number of HSP's gapped (non-prelim): 195
length of query: 320
length of database: 12,070,560
effective HSP length: 81
effective length of query: 239
effective length of database: 9,725,448
effective search space: 2324382072
effective search space used: 2324382072
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 59 (27.9 bits)
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