Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001740-TA|BGIBMGA001740-PA|IPR005479|Carbamoyl-phosphate
synthase L chain, ATP-binding
(222 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 36 0.022
At3g13226.1 68416.m01662 regulatory protein RecX family protein ... 35 0.051
At3g13200.1 68416.m01652 Cwf15 / Cwc15 cell cycle control family... 35 0.051
At5g40690.1 68418.m04939 expressed protein 34 0.089
At5g17160.1 68418.m02010 expressed protein 33 0.12
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 33 0.12
At2g23050.1 68415.m02748 phototropic-responsive NPH3 family prot... 33 0.15
At1g15280.2 68414.m01829 glycine-rich protein 33 0.15
At1g15280.1 68414.m01828 glycine-rich protein 33 0.15
At3g14900.1 68416.m01884 expressed protein 33 0.20
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 32 0.27
At4g26660.1 68417.m03841 expressed protein weak similarity to ph... 32 0.27
At4g33740.2 68417.m04791 expressed protein 32 0.36
At4g33740.1 68417.m04790 expressed protein 32 0.36
At5g49880.1 68418.m06177 mitotic checkpoint family protein simil... 31 0.47
At4g20330.1 68417.m02968 transcription initiation factor-related... 31 0.47
At3g57800.2 68416.m06443 basic helix-loop-helix (bHLH) family pr... 31 0.47
At3g57800.1 68416.m06442 basic helix-loop-helix (bHLH) family pr... 31 0.47
At2g33350.1 68415.m04088 hypothetical protein 31 0.62
At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF052... 31 0.62
At3g02125.1 68416.m00179 hypothetical protein 31 0.83
At5g37390.1 68418.m04498 hypothetical protein contains Pfam prof... 30 1.1
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 30 1.1
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 30 1.1
At4g15790.1 68417.m02403 expressed protein 30 1.4
At3g50550.1 68416.m05528 expressed protein isoform contains a n... 30 1.4
At3g47330.1 68416.m05144 hypothetical protein contains Pfam prof... 30 1.4
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 30 1.4
At5g59920.1 68418.m07514 DC1 domain-containing protein contains ... 29 1.9
At5g44415.1 68418.m05439 hypothetical protein contains Pfam prof... 29 1.9
At5g37560.1 68418.m04523 zinc finger protein-related contains we... 29 1.9
At5g07820.1 68418.m00896 expressed protein 29 1.9
At4g28960.1 68417.m04137 hypothetical protein contains Pfam prof... 29 1.9
At4g09370.1 68417.m01546 hypothetical protein contains Pfam prof... 29 1.9
At2g27090.1 68415.m03255 expressed protein contains Pfam domains... 29 1.9
At2g23710.1 68415.m02831 hypothetical protein contains Pfam prof... 29 1.9
At5g07170.1 68418.m00817 hypothetical protein 29 2.5
At4g34360.1 68417.m04882 protease-related similar to PIR|I46078 ... 29 2.5
At3g01260.1 68416.m00032 aldose 1-epimerase family protein simil... 29 2.5
At5g15380.1 68418.m01799 cytosine methyltransferase, putative si... 29 3.3
At5g06110.1 68418.m00679 DNAJ heat shock N-terminal domain-conta... 29 3.3
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 29 3.3
At4g32970.1 68417.m04690 expressed protein low similarity to SP|... 29 3.3
At3g22790.1 68416.m02873 kinase interacting family protein simil... 29 3.3
At3g06810.1 68416.m00808 acyl-CoA dehydrogenase-related low simi... 29 3.3
At2g33400.1 68415.m04094 expressed protein 29 3.3
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 29 3.3
At1g77122.1 68414.m08984 expressed protein 29 3.3
At1g57680.2 68414.m06546 expressed protein 29 3.3
At1g57680.1 68414.m06545 expressed protein 29 3.3
At4g11200.1 68417.m01813 hypothetical protein contains weak hit ... 28 4.4
At3g42580.1 68416.m04420 Ulp1 protease family protein contains P... 28 4.4
At2g26780.1 68415.m03212 expressed protein contains Pfam profile... 28 4.4
At2g19480.1 68415.m02277 nucleosome assembly protein (NAP), puta... 28 4.4
At1g54920.2 68414.m06269 expressed protein 28 4.4
At1g54920.1 68414.m06270 expressed protein 28 4.4
At5g66840.1 68418.m08427 SAP domain-containing protein contains ... 28 5.8
At5g63740.1 68418.m08000 zinc finger protein-related 28 5.8
At5g40450.1 68418.m04905 expressed protein 28 5.8
At5g04410.1 68418.m00433 no apical meristem (NAM) family protein... 28 5.8
At4g25350.1 68417.m03648 EXS family protein / ERD1/XPR1/SYG1 fam... 28 5.8
At4g10480.1 68417.m01720 nascent polypeptide associated complex ... 28 5.8
At1g12120.1 68414.m01404 expressed protein contains Pfam domain ... 28 5.8
At5g08610.1 68418.m01024 DEAD box RNA helicase (RH26) strong sim... 27 7.7
At3g53305.1 68416.m05879 cytochrome P450, putative very similar ... 27 7.7
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 27 7.7
At2g32910.1 68415.m04035 expressed protein 27 7.7
At2g25170.1 68415.m03010 chromatin remodeling factor CHD3 (PICKL... 27 7.7
At1g05430.1 68414.m00551 expressed protein 27 7.7
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 35.9 bits (79), Expect = 0.022
Identities = 23/101 (22%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 85 IQCDENDKNEIQEIILEEAIN--IKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMM 142
+ +E+D N +E E +N + D ++D+I D K + S + N+ +
Sbjct: 527 VDANESDGNSTKERHQEAQVNNGVSTEDKNLDNIGADEQKKNDKSVEVTTNDGDHTKEKR 586
Query: 143 EDTACDNQVEILELNVKSAKRKLLRRDIKTKEAVNLKSSND 183
E+T +N + N+++ + K +++K E+V K++N+
Sbjct: 587 EETQGNNGESVKNENLENKEDK---KELKDDESVGAKTNNE 624
>At3g13226.1 68416.m01662 regulatory protein RecX family protein
contains Pfam PF02631: regulatory protein RecX
Length = 382
Score = 34.7 bits (76), Expect = 0.051
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 85 IQCDENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFN-ETNTDVMMME 143
+ CD++D+ + L++ I+ D V K N+K ED DF+ D M
Sbjct: 105 VSCDDSDEGFMS---LDKGIDASRLDHSVLGSKVKANIKET-GEDTDFHLRDKNDADMYS 160
Query: 144 DTACDNQVEILELNVKSAKRKLLRRDIKTKEAVNLKSSNDNGKIANE 190
D +CD+ + V+S K R+ + + + L + K + E
Sbjct: 161 DVSCDDSNDESSNEVRSTGYKSTRQHKQAYDKIKLHLEAEQAKSSKE 207
>At3g13200.1 68416.m01652 Cwf15 / Cwc15 cell cycle control family
protein contains Pfam profile PF04889: Cwf15/Cwc15 cell
cycle control protein; similar to Cell cycle control
protein cwf15 (Swiss-Prot:P78794) [Schizosaccharomyces
pombe]
Length = 230
Score = 34.7 bits (76), Expect = 0.051
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 6/55 (10%)
Query: 89 ENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMME 143
E+ K + +E I+ +++ A+DSDV DIK D++ +D E DD +E +T+ +M E
Sbjct: 93 EDSKRDPEERIIPRSVD--ADDSDV-DIKSDDD---SDDESDDDDEDDTEALMAE 141
>At5g40690.1 68418.m04939 expressed protein
Length = 210
Score = 33.9 bits (74), Expect = 0.089
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 88 DENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMM 142
+EN++ E + ++EE +NI+++D D + + + + +D DDD + DV MM
Sbjct: 136 EENEEEENRGSVVEEVVNIQSSD-DGGETEEEGSNDDDDDTDDDGRMSFCDVGMM 189
>At5g17160.1 68418.m02010 expressed protein
Length = 569
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 89 ENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACD 148
+ ++ IQE E + DSD D K ++ NDSE + N + + M++ T D
Sbjct: 337 QETEHAIQENDAEPETKVNQTDSDAGDSKTKQAIQENDSEPEKINNFDEET-MVDQTDSD 395
Query: 149 NQVE 152
++ E
Sbjct: 396 SETE 399
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 112 DVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACDNQVEI 153
D DD D+ + +D +DDD + ++ D+ + E+ C+N+ I
Sbjct: 642 DDDDDDDDDGDEDDDDDDDDVDPSSKDIRLEEENECENRAVI 683
>At2g23050.1 68415.m02748 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 481
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/65 (24%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 46 ELTDLILTDRLVSTIDRESRNLNSNLCTKLYKANHSDVCIQCDENDKNEIQEIILEEAIN 105
+L D L + ++ + E N++S+ TKL++A+ + + C+E K ++++ + E+
Sbjct: 260 QLIDRSLINTIIELLPDEKGNISSSFLTKLHRAS---IFLGCEETVKEKLKKRVSEQLEE 316
Query: 106 IKAND 110
ND
Sbjct: 317 TTVND 321
>At1g15280.2 68414.m01829 glycine-rich protein
Length = 585
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 61 DRESRNLNSNLCTKLYKANHSDVCIQCDENDKNEIQEIILEEAI-NIKANDSDVDDIKYD 119
+ + LN +L T+ +A+ D +D + ++++ + A+ + +D +V +KYD
Sbjct: 9 ESDPEELNRSLATRRREASDDD------SDDDDAVRDVKNQRAVVDSDLSDEEVGTVKYD 62
Query: 120 NNMKTNDSEDDDFNET 135
N+ DS +DD E+
Sbjct: 63 NDEDGEDSYEDDEEES 78
>At1g15280.1 68414.m01828 glycine-rich protein
Length = 584
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 61 DRESRNLNSNLCTKLYKANHSDVCIQCDENDKNEIQEIILEEAI-NIKANDSDVDDIKYD 119
+ + LN +L T+ +A+ D +D + ++++ + A+ + +D +V +KYD
Sbjct: 9 ESDPEELNRSLATRRREASDDD------SDDDDAVRDVKNQRAVVDSDLSDEEVGTVKYD 62
Query: 120 NNMKTNDSEDDDFNET 135
N+ DS +DD E+
Sbjct: 63 NDEDGEDSYEDDEEES 78
>At3g14900.1 68416.m01884 expressed protein
Length = 611
Score = 32.7 bits (71), Expect = 0.20
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 73 TKLYKANHSDVCIQCDENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDF 132
TK +KA ++ + CD D++ E+ I+I + + ++ + ND +DDD
Sbjct: 396 TKEWKAKLEEMELGCDAPDED-------EDEISISGSSEKAEFSEWIEDEADNDDDDDDD 448
Query: 133 NETNTDVMMMEDTACDNQVEILELNVK 159
++ + +V ++D DN V +E NV+
Sbjct: 449 DDDDGEVEEVDDD--DNMVVDVEGNVE 473
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 32.3 bits (70), Expect = 0.27
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 89 ENDKNEIQEIILEEAINIKANDSDVDDIKY--DNNMKTNDSEDDDFNETNTD-----VMM 141
E K ++ + A + N SD D+ K NN K + ED++ NET+ D +
Sbjct: 234 EEAKPKVLKSCNSNADEVAENSSDEDEPKVLKTNNSKADKDEDEEENETSDDEAEPKALK 293
Query: 142 MEDTACDNQVEILELNVKSAK-RKLLRRDIKTKEAVNLKSSNDNGKIANEDYID 194
+ ++ DN + K K+ + IK+ A N++G+ A ++ D
Sbjct: 294 LSNSNSDNGENNSSDDEKEITISKITSKKIKSNTADEENGDNEDGEKAVDEMSD 347
>At4g26660.1 68417.m03841 expressed protein weak similarity to
phragmoplast-associated kinesin-related protein 1
[Arabidopsis thaliana] GI:8745333
Length = 806
Score = 32.3 bits (70), Expect = 0.27
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 89 ENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACD 148
+N +I E AI + N D K +DS+D +F E D M + T +
Sbjct: 38 QNPDTKIPRSNDENAIPVDPNQKASDHHTALQFTKQSDSKDGNFGEPIKDNKMGQSTFAE 97
Query: 149 NQVEILELNVKSAKRKLLRRDIKTKEAVNLKSSNDNGKIANE 190
++ +L+ +K R +L R + + +K +D+ + ++
Sbjct: 98 DKRSLLDSPLKVESRSILSRRTNSVPS-EIKEEDDDDSLGDQ 138
>At4g33740.2 68417.m04791 expressed protein
Length = 227
Score = 31.9 bits (69), Expect = 0.36
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 61 DRESRNLNSNLCTKLYKANHSDVCIQCDENDKN-EIQEIILEEAINIKANDSDVDDIKYD 119
+++S+ N N ++ K +V + DE DKN + +E+ E+ K + ++D+
Sbjct: 105 EKKSKVENGNHEEEVEKDEEEEVA-EDDEEDKNKQGEEVAEEDEEENKHEEDEIDEQDQS 163
Query: 120 NNMKTNDSEDDDFNETNTDVMMMED--TACDNQVEILELNVKSAKRKLLRRD 169
N D +D+ E M D N + +++ V A+ + + D
Sbjct: 164 KNAGDTDKDDETLEEEKESGMSENDEKEKETNHADEIDMTVDEAREEHYKAD 215
>At4g33740.1 68417.m04790 expressed protein
Length = 227
Score = 31.9 bits (69), Expect = 0.36
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 61 DRESRNLNSNLCTKLYKANHSDVCIQCDENDKN-EIQEIILEEAINIKANDSDVDDIKYD 119
+++S+ N N ++ K +V + DE DKN + +E+ E+ K + ++D+
Sbjct: 105 EKKSKVENGNHEEEVEKDEEEEVA-EDDEEDKNKQGEEVAEEDEEENKHEEDEIDEQDQS 163
Query: 120 NNMKTNDSEDDDFNETNTDVMMMED--TACDNQVEILELNVKSAKRKLLRRD 169
N D +D+ E M D N + +++ V A+ + + D
Sbjct: 164 KNAGDTDKDDETLEEEKESGMSENDEKEKETNHADEIDMTVDEAREEHYKAD 215
>At5g49880.1 68418.m06177 mitotic checkpoint family protein similar
to mitotic checkpoint protein isoform MAD1a [Homo
sapiens] GI:4580767; contains Pfam profile PF05557:
Mitotic checkpoint protein
Length = 726
Score = 31.5 bits (68), Expect = 0.47
Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 17/190 (8%)
Query: 12 NNEDYRRLSACRICLALGVKLYN----MKKYKLSMLYEELTDLILTDRLVS---TIDRES 64
NN R + C L VKL N KK + S E +L D+L ++DRE
Sbjct: 135 NNSQERYTKELQSCHELEVKLQNEMNLRKKAESSAATAEEKAKLLEDKLTQLSGSVDREK 194
Query: 65 RNLNSNLCTKLYKANHSDVCIQCDENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKT 124
+ LN+++ +A S I D ++ + + E N+ + + + +D ++
Sbjct: 195 KRLNNDIAQLGKEAKLSVARIGADL-ERMQCRAQNAETESNLLRSQLEHLKLIFDECLQE 253
Query: 125 NDSEDDDFNETNTDVMMMEDTACDNQVEILELNVKSAKRKLLRRDIKTKEAVNLKSSNDN 184
D + ++ ++ DN V VK + +L R + + +EA LKS + +
Sbjct: 254 KTEVDKKLSSFTSEAA----SSSDNSVL-----VKHLQEELKRYEAEVREARKLKSRHLD 304
Query: 185 GKIANEDYID 194
++ N + ++
Sbjct: 305 AELLNVNLLE 314
Score = 31.1 bits (67), Expect = 0.62
Identities = 25/102 (24%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 95 IQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDT-ACDNQ--- 150
+ E +++EA K+ + D D ++ + ++ + D++ NT V+ M +T +N+
Sbjct: 502 LNEKLVDEARRNKSLERDSDRLRSEISLLESKLGHGDYSAANTRVLRMVNTLGVENEAKQ 561
Query: 151 -VEILELNVKSAKRKLLR-RDIKTK--EAVNLKSSNDNGKIA 188
+E L+ ++ K +L ++K++ +A L S+ GKIA
Sbjct: 562 TIEALQAELQKTKERLQAVEELKSQSGDAGKLVDSHITGKIA 603
>At4g20330.1 68417.m02968 transcription initiation factor-related
contains weak similarity to Transcription initiation
factor IIE, beta subunit (TFIIE-beta)
(Swiss-Prot:P29084) [Homo sapiens]
Length = 286
Score = 31.5 bits (68), Expect = 0.47
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 114 DDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACDNQVEILELNVKSAKRKLLRRDIKTK 173
+DI Y N+ K DD+F D+ + D D + E+L++ +K A RR
Sbjct: 186 EDIAYPNDFKCEIKVDDEFKALFRDINIPND-MLDVEKELLKIGLKPATNTAERRAAAQT 244
Query: 174 EAVNLKSSNDNGK 186
++ K + K
Sbjct: 245 HGISNKPKDKKKK 257
>At3g57800.2 68416.m06443 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain; supported by full-length cDNA
gi:20127059
Length = 379
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 134 ETNTDVMMMEDTACDNQVEILELNVKSAKRKLLRRDIKTKEAVNLKSSNDNGKI 187
ET++ ++ D+A +NQ+ N ++ KRK + K+ N KSS +N K+
Sbjct: 147 ETDSSQRLISDSAIENQIPCPNQNNRNGKRKDFEKKGKSSTKKN-KSSEENEKL 199
>At3g57800.1 68416.m06442 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain; supported by full-length cDNA
gi:20127059
Length = 426
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 134 ETNTDVMMMEDTACDNQVEILELNVKSAKRKLLRRDIKTKEAVNLKSSNDNGKI 187
ET++ ++ D+A +NQ+ N ++ KRK + K+ N KSS +N K+
Sbjct: 147 ETDSSQRLISDSAIENQIPCPNQNNRNGKRKDFEKKGKSSTKKN-KSSEENEKL 199
>At2g33350.1 68415.m04088 hypothetical protein
Length = 440
Score = 31.1 bits (67), Expect = 0.62
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 45 EELTDLILTDRLVSTIDRESRN------LNSNLCTKLYKANHSDVCI-QCDENDKNEIQE 97
++ DLI T + + +D E +N LN + T A D C Q + N+ E
Sbjct: 16 KQTLDLIKTPKSLECLDVEKQNQNILQILNIDDITSPLSAQIFDFCDPQLFQETFNQSSE 75
Query: 98 I-----ILEEAINIKANDSDV---DDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACDN 149
+ ILE++ + +N + ++ +NN K + +DD+ + NTD+ ++ D+ D
Sbjct: 76 VTSTSNILEKSGSFHSNTNTTTTTENSNNNNNNKNTNLQDDEDDNNNTDLSIIFDSQEDF 135
Query: 150 QVEI 153
+ +I
Sbjct: 136 ENDI 139
>At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF05285:
SDA1 domain; similar to mystery 45A
(GI:16797816){Drosophila melanogaster}
Length = 804
Score = 31.1 bits (67), Expect = 0.62
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 107 KANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACDNQVEILELNVKSAKRKLL 166
+ NDSD D +N ++ ED + ++++ + ++ A + +I++ +
Sbjct: 591 EVNDSDEADTDSENEEIESEEEDGEASDSSVEDSGNKEKAKGKKRKIVDFDANLLSADTS 650
Query: 167 RRDIKT-KEAVNLKSSNDNGK--IANEDYIDLSLFDIK 201
R +K EA N K S D G ++NED+ + K
Sbjct: 651 LRALKRFAEAKNEKPSFDEGDGILSNEDFRKIKTLQAK 688
>At3g02125.1 68416.m00179 hypothetical protein
Length = 355
Score = 30.7 bits (66), Expect = 0.83
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 94 EIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACDNQVEI 153
E + I +E ++ ++SD++D + + M +S DD+ E TD++ E + E+
Sbjct: 165 EKETIAEKEPYQVENSNSDIEDNEEEEKMSEVES-DDEHEEEQTDMIEAEALV---EKEV 220
Query: 154 LELNVKSAKRKLLRRDIKTKEAVNLKSSNDNGKIAN 189
+E VK K + + +++ +S N I +
Sbjct: 221 IE-TVKENKPEDSNSIVSHSPSISCRSDTSNNSIGS 255
>At5g37390.1 68418.m04498 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 628
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 105 NIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDT 145
N+ N D DD NM+ +D +DDD +VM + T
Sbjct: 113 NLPQNMQDGDDDNLPQNMQDDDDDDDDNQPLPPEVMYFDPT 153
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 79 NHSDVCIQCDENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTN 125
N D +C+END N +++LE N + D+DV+ + M+ N
Sbjct: 1174 NEYDYNEECEENDDN---DLVLETDHNEECQDNDVEKKRSSKRMRVN 1217
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 88 DENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSED 129
DE D++++ E + ++ A+DSDVD+ Y NN + S D
Sbjct: 17 DEMDEDDLDEDFRGD--DMAASDSDVDEFDYSNNKIADTSAD 56
>At4g15790.1 68417.m02403 expressed protein
Length = 191
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 89 ENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACD 148
+N K ++Q + +K ++ +K N++ ++ F + T + +D D
Sbjct: 94 QNLKQDLQSWRGKLDTQVKVYREELSGLKKTLNLEVEQLREE-FKDLKTTLNQQQD---D 149
Query: 149 NQVEILELNVKSAKRKLLRRDIKTKEAVNLKSSNDNGKIA 188
+ L ++ +K ++ +R T+E V S++DN K A
Sbjct: 150 VSASLKSLGLQDSKEQIDKRSEVTEEKVEALSTDDNAKEA 189
>At3g50550.1 68416.m05528 expressed protein isoform contains a
non-consensus AT donor site at intron 1
Length = 95
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 111 SDVDDIKYDNNMKTNDSE--DDDFNETNTD 138
SD DD + D N+ +DSE +DD+ ++N+D
Sbjct: 32 SDEDDEEEDRNLSGDDSESSEDDYTDSNSD 61
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 88 DENDKNEIQEIILEEAINIKANDSDV--DDIKYDNNMKTNDSEDDDFNETNTDVMMMEDT 145
D+ D E EE N+ +DS+ DD N+ +D E+DD +E + ED+
Sbjct: 25 DDTDGESSDEDDEEEDRNLSGDDSESSEDDYTDSNSDSDDDDEEDDDDEEEEE---EEDS 81
Query: 146 ACDNQVEILE 155
D +L+
Sbjct: 82 LVDKVTRLLK 91
>At3g47330.1 68416.m05144 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 664
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 105 NIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDT 145
N+ N D DD NM+ +D +DDD +VM + T
Sbjct: 113 NLPQNMHDGDDDNLPQNMQDDDDDDDDNQPLPPEVMYFDPT 153
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/154 (14%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 46 ELTDLILTDRLVSTIDRESRNLNSNLCTKLYKANHSDVCIQCDENDKNEIQEIILEEAI- 104
++ +L + + ++ R + ++ T K N SD+ + + N + ++ E+ +
Sbjct: 62 QILELEKKEERLRLVEERERKIEASFSTLQEKGNESDLILLMEANVMRLVLQMQFEQVVV 121
Query: 105 -NIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDT----ACDNQVEILELNVK 159
+ A ++ + + +D+ MK ++ + +V ++ T CD +++ + ++K
Sbjct: 122 AQLNAQENFLGSL-HDSMMKKHEELMTELEARKNEVALISKTIDAKTCDLDMKVKDFDLK 180
Query: 160 -SAKRKLLRRDIKTKEA--VNLKSSNDNGKIANE 190
+ + + +R++ + E L++ + ++ NE
Sbjct: 181 QTTESERMRKETELMETSLKQLEARENELRLLNE 214
>At5g59920.1 68418.m07514 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 79 NHSDVCIQCDENDKNEIQEIILEEAINIKANDSD--VDDIKYDNNMKTNDSEDDDFNETN 136
N CIQC+ K + IL+++ + + SD DD+ D + +D DD ++
Sbjct: 613 NTRPFCIQCNSRCKVSVILKILKDSEDGSDDGSDDVSDDVSDDPSNDVSDDTSDDDSDVV 672
Query: 137 TDVMMMEDTACDN 149
+DV + +D + D+
Sbjct: 673 SDV-VSDDASNDD 684
>At5g44415.1 68418.m05439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 611
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 105 NIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDT 145
N+ N D DD NM+ +D +DDD +VM + T
Sbjct: 113 NLPQNMQDGDDDLQPQNMQDDDDDDDDNQPLPPEVMYFDPT 153
>At5g37560.1 68418.m04523 zinc finger protein-related contains weak
similarity to zinc fingers and Pfam:PF01485 IBR domain
Length = 408
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 79 NHSDVCIQCDENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNET 135
NH Q +N ++E ++ L + +D D +D +D + + +D +DDD + T
Sbjct: 341 NHITCSCQLMDNREDE-EDYNLHVDAEVNNDDDDDEDYVFDEDYEEDDDDDDDDDGT 396
>At5g07820.1 68418.m00896 expressed protein
Length = 561
Score = 29.5 bits (63), Expect = 1.9
Identities = 27/161 (16%), Positives = 71/161 (44%), Gaps = 7/161 (4%)
Query: 56 LVSTIDRESRNLNSNLCTKLYKANHSDVCIQCDENDKNEIQEIILEEAINIKANDSDVDD 115
+V T+ + + +N K+ D+ +K +I E + + + ++ D +V
Sbjct: 170 VVRTVKKTNLVVNKASRISQNKSPKEDLSKNLKNKEKGKIVEPVRCDDV-LEKTDLEVKK 228
Query: 116 IKYDNNMKTNDSEDDDFNETNTDVMMMEDTACDNQVEILELNVKSAKRKLLRRDIKTKEA 175
+ + + N S +D + + E CD+ +E L+ + R ++ K +
Sbjct: 229 V---SRISENKSSKEDTLKNKEKAKIDEPVRCDDVLEKTSLDAQKVSRISENKNSKEERL 285
Query: 176 VNLKS---SNDNGKIANEDYIDLSLFDIKYLSQEEQRCQGT 213
NLK+ +N + + +D ++ +L+ ++ +++++ T
Sbjct: 286 KNLKNKEKTNIDEPVRPDDAVEKTLYVVESSVEKKKKKMST 326
Score = 28.7 bits (61), Expect = 3.3
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 53 TDRLVSTIDRESRNLNSNLCTKLYKANHS-DVCIQCDENDKNEIQEIILEEAINIKANDS 111
TD V + R S N +S T K D ++CD D E + ++ I N +
Sbjct: 222 TDLEVKKVSRISENKSSKEDTLKNKEKAKIDEPVRCD--DVLEKTSLDAQKVSRISENKN 279
Query: 112 DVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACDNQVEILELNVKSAKRKLLRRDIK 171
++ N+K + +TN D + D A + + ++E +V+ K+K+ + +K
Sbjct: 280 SKEERL--KNLKNKE-------KTNIDEPVRPDDAVEKTLYVVESSVEKKKKKMSTKSVK 330
Query: 172 TKE 174
E
Sbjct: 331 ISE 333
>At4g28960.1 68417.m04137 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 493
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 105 NIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDT 145
N+ N D DD NM+ +D +DDD +VM + T
Sbjct: 81 NLPQNMQDGDDDLQPQNMQDDDDDDDDNQPLPPEVMYFDPT 121
>At4g09370.1 68417.m01546 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 666
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 105 NIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDT 145
N+ N D DD NM+ +D +DDD +VM + T
Sbjct: 113 NLPQNMQDGDDDLQPQNMQDDDDDDDDNQPLPPEVMYFDPT 153
>At2g27090.1 68415.m03255 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 743
Score = 29.5 bits (63), Expect = 1.9
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 110 DSDVDDIKYDNNMKTNDSEDDDFNETNTDVMM 141
+ D +D + ++ DS+DD+F+E +D ++
Sbjct: 210 EDDGEDFSFQEREESRDSDDDEFDEPTSDTLV 241
>At2g23710.1 68415.m02831 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287;
this may be a pseudogene; the protein appears slightly
truncated on the 3' end due to intervening stop codon.
Length = 592
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 105 NIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDT 145
N+ N D DD NM+ +D +DDD +VM + T
Sbjct: 113 NLPQNMQDGDDDLQPQNMQDDDDDDDDNQPLPPEVMYFDPT 153
>At5g07170.1 68418.m00817 hypothetical protein
Length = 542
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 78 ANHSDVCIQCDENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNT 137
++ D I +D+ + E A + A+D+D D+ D++ +D +DDD ++ +
Sbjct: 80 SSQDDPLIDDSSSDEEDDSESTHCYAADDDADDTDDDEDDDDDDDDDDDDDDDDDDDDDD 139
Query: 138 DVMMMEDTACDNQVE 152
D +D + D++VE
Sbjct: 140 D---DDDESKDSEVE 151
>At4g34360.1 68417.m04882 protease-related similar to PIR|I46078
endothelin converting enzyme, Bos primigenius taurus
Length = 248
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 44 YEELTDLILTDRLVSTIDRESRNLNSNLCTKLYKANHSDV-CIQCDENDKNEIQEIILEE 102
Y LI+++ S+ E NS LC +LYK D+ CI ++Q +L +
Sbjct: 37 YSHFQHLIISNIKPSSSVLELGCGNSQLCEELYKDGIVDITCIDLSSVAVEKMQSRLLPK 96
Query: 103 AI-NIKANDSDVDDIKYDN 120
IK +D+ D+ +D+
Sbjct: 97 GYKEIKVVQADMLDLPFDS 115
>At3g01260.1 68416.m00032 aldose 1-epimerase family protein similar
to non-cell-autonomous protein pathway2, plasmodesmal
receptor [Nicotiana tabacum] GI:15824567; contains Pfam
profile PF01263: Aldose 1-epimerase
Length = 378
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 74 KLYKANHSDVCIQCDENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFN 133
K +K +D I ND + + ++ N +D D D D++ ND +DDD N
Sbjct: 18 KKFKGGVTDHSIS-KANDNDHDDDDHDQDDDNDGDHDDDDHDDDNDHDDDNNDHDDDDNN 76
Query: 134 ETNTD 138
+ N D
Sbjct: 77 DDNND 81
Score = 27.9 bits (59), Expect = 5.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 77 KANHSDVCIQCDENDKNEIQEIILEEAINIKANDSDVDDIKYD---NNMKTNDSEDDDFN 133
KAN +D D++D+++ + ++ + ND D D+ +D NN ND +DD +
Sbjct: 31 KANDNDH--DDDDHDQDDDNDGDHDDDDHDDDNDHDDDNNDHDDDDNNDDNNDGDDDHDD 88
Query: 134 ETNTDVMMMEDTACDNQVEILELNVKSAKR 163
+ N D + T ++++ L VK R
Sbjct: 89 DNNDDGDDEKKTLRVHELKKGNLTVKFTNR 118
>At5g15380.1 68418.m01799 cytosine methyltransferase, putative
similar to cytosine methyltransferase [Arabidopsis
thaliana] GI:7658293; contains Pfam profile PF00627:
UBA/TS-N domain
Length = 624
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 94 EIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTD 138
E+ ++ E +NI ND D DD Y ++ ++D ED+ N +N D
Sbjct: 151 EVDKLRESEDMNININDDD-DDNLY--SLSSDDEEDELNNSSNED 192
>At5g06110.1 68418.m00679 DNAJ heat shock N-terminal
domain-containing protein / cell division
protein-related similar to GlsA [Volvox carteri f.
nagariensis] GI:4633129; contains Pfam profiles PF00226
DnaJ domain, PF00249 Myb-like DNA-binding domain
Length = 663
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/39 (28%), Positives = 25/39 (64%)
Query: 170 IKTKEAVNLKSSNDNGKIANEDYIDLSLFDIKYLSQEEQ 208
I + ++ N+K +GK+ ++ Y L L +++YL+ ++Q
Sbjct: 80 IPSYDSHNIKGKKKSGKLQHDHYALLGLGNLRYLATDDQ 118
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains Pfam
profile PF00730: HhH-GPD superfamily base excision DNA
repair protein
Length = 1729
Score = 28.7 bits (61), Expect = 3.3
Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 79 NHSDVCIQCDENDKNEIQEIIL------EEAINIKANDSDVDDIKYDNNMKTNDSEDDDF 132
N S+ C+ + K I + L E+ ++ +N+S + +I ++N + ++
Sbjct: 1108 NSSEECLTRQSSTKQNITDGCLPRDRTAEDVVDPLSNNSSLQNILVESNSSNKEQTAVEY 1167
Query: 133 NETNTDVMM-MEDTACDNQVEILELNVKSAKRKLLRRDIKTKEAVNLKSSNDNGKIANED 191
ETN ++ M+ T D + +++ LR+D++ E ++ N+ I E
Sbjct: 1168 KETNATILREMKGTLADGK-------KPTSQWDSLRKDVEGNEGRQERNKNNMDSIDYEA 1220
Query: 192 YIDLSLFDIKYLSQE 206
S+ +I +E
Sbjct: 1221 IRRASISEISEAIKE 1235
>At4g32970.1 68417.m04690 expressed protein low similarity to
SP|Q13061 Triadin {Homo sapiens}
Length = 750
Score = 28.7 bits (61), Expect = 3.3
Identities = 30/129 (23%), Positives = 64/129 (49%), Gaps = 17/129 (13%)
Query: 92 KNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACDNQV 151
++EI+E E+ + + DV + DN M + +D N+ N + +++ A N
Sbjct: 598 RSEIEE--KEDMLEASLLEIDVLGLS-DNVMFGTNRGEDIGNQQNPQLKIIKWIA--NST 652
Query: 152 EILEL-----NVKSAKRKLL-------RRDIKTKEAVNLKSSNDNGKIANEDYIDLSLFD 199
IL+L NV +R+++ R +KT + +N+KS ++G + + DL+ F+
Sbjct: 653 GILKLVGRLSNVVDNQREVIFLYSVITRSSLKTVDFLNVKSKTNSGSYRHHFFDDLTKFE 712
Query: 200 IKYLSQEEQ 208
+ ++ ++
Sbjct: 713 VTAIANTDR 721
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 92 KNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACDNQV 151
K EI+ IL EA+ + D ++Y+ +M+ ++ F+ DV + + A +
Sbjct: 213 KAEIETKILAEALAKLEAERDAALLRYNESMQKITELEESFSHAQEDVKGLTNRATKAET 272
Query: 152 EILELNVKSAKRKL 165
E+ N+K A +L
Sbjct: 273 EV--ENLKQAHSRL 284
>At3g06810.1 68416.m00808 acyl-CoA dehydrogenase-related low
similarity to acyl-CoA dehydrogenase [Acinetobacter sp.
NCIMB9871] GI:14587418; contains Pfam profiles PF01636:
Phosphotransferase enzyme family, PF00441: Acyl-CoA
dehydrogenase C-terminal domain, PF02770: Acyl-CoA
dehydrogenase middle domain
Length = 824
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 54 DRLVSTIDRESRNLNSNLCTKLYKANHSDVCIQCDENDKNE 94
DR++ ID E L + +C Y H V +Q D+ +E
Sbjct: 244 DRVIGIIDWELSTLGNQMCDVAYSCMHYIVNVQLDKEHVSE 284
>At2g33400.1 68415.m04094 expressed protein
Length = 272
Score = 28.7 bits (61), Expect = 3.3
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 58 STIDRESRNLNSNLCTKLYKANHSDVCIQCDENDKNEIQEIILEEAINIKANDSDVDDIK 117
S ID++ +L+S H+ V DE+D+ E LE+ N++D +D
Sbjct: 116 SAIDKKPEDLSSRSVYPSNYRYHNCVDSFEDEDDEMGYGESDLEDEDYYTDNENDYEDDA 175
Query: 118 YDNNMKTNDSEDDDFNETNTDVMM--MEDTACDNQVEILELNVKSAKRKLLRRDIKTKEA 175
D D E+++ NE + ++ +E+ A V+ + VK ++ + D+ +
Sbjct: 176 DD-----EDEEEEEENEQDVAPLLNPVENLAQWKAVKARPVKVKRVMKENVEEDMDDQAK 230
Query: 176 VNLKSSNDNGKIAN 189
LK N ++N
Sbjct: 231 PLLKEIIVNTSLSN 244
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 28.7 bits (61), Expect = 3.3
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 50 LILTDRLVSTIDRESRNLNSNLCTKLYKANHSDVCIQC---DENDKNEIQEIILEEAINI 106
L++T++ STI + +L +NLC L +C C D D+N ++I + +
Sbjct: 1660 LLVTEQK-STITYD--DLTTNLCPALSTQQLYRICTLCKIDDHEDQNVSPDVISNLKLLV 1716
Query: 107 KANDSDVDDIKYDNNMKTNDSEDDDFN 133
D D DNN + D+ N
Sbjct: 1717 TDEDEDSRSFLLDNNSSIPFAADEISN 1743
>At1g77122.1 68414.m08984 expressed protein
Length = 323
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 77 KANHSDVCIQCDENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETN 136
K N + I +E ++ E +EI+L E I ++ +DD +YD +D +D +F+E+
Sbjct: 72 KPNKVEELIIEEEEEEEEEEEIVLPEEIQENQDELLLDD-EYDE----DDDDDFEFDESE 126
Query: 137 TDV 139
++
Sbjct: 127 EEL 129
>At1g57680.2 68414.m06546 expressed protein
Length = 362
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 171 KTKEAVNLKSSNDNGKIANEDYIDLSLF 198
+T E ++L+ D+G E Y++LSLF
Sbjct: 330 QTDEGLSLRGRRDSGSSTQERYVELSLF 357
>At1g57680.1 68414.m06545 expressed protein
Length = 362
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 171 KTKEAVNLKSSNDNGKIANEDYIDLSLF 198
+T E ++L+ D+G E Y++LSLF
Sbjct: 330 QTDEGLSLRGRRDSGSSTQERYVELSLF 357
>At4g11200.1 68417.m01813 hypothetical protein contains weak hit to
Pfam profile PF03108: MuDR family transposase
Length = 462
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 89 ENDKNEIQ-EIILEEAINIKANDSDVDDIK-YDNNMKTNDSE 128
E+ +E++ EI+ EE +N+KA + V DI+ Y+ + D E
Sbjct: 275 ESPDSELEAEIVDEEDVNVKAEEIQVFDIRNYEEQIPYEDEE 316
>At3g42580.1 68416.m04420 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 903
Score = 28.3 bits (60), Expect = 4.4
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 86 QCDENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDD-DFNET-----NTDV 139
Q +EN +++++ E N++ + DD+K D + + DD +F ET N+DV
Sbjct: 646 QTEENVAHDVEK----EKKNVRRKVTFADDLKSDGTISDHTKSDDVEFMETRESILNSDV 701
Query: 140 MMMEDTACDNQVEILELNVKSAKRKLLRRDIKTKEAVNLKSSNDNGK 186
++ + N +E V AK + L +K ++ L + +N K
Sbjct: 702 LVKAEDVPYNPLE----KVDEAKFEKLCSIMKGEKMYALHKNGENMK 744
>At2g26780.1 68415.m03212 expressed protein contains Pfam profile
TBP (TATA-binding protein) -interacting protein 120
(TIP120); contains TIGRFAM profile TIGR01612:
reticulocyte binding protein
Length = 1866
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 160 SAKRKLLRRDIKTKEAVNLKSSNDNGKIANEDYIDLSLFD-IKYLSQEEQRCQGT 213
S L +++K+ V + D+ + + I LFD + Y S++E+RC GT
Sbjct: 921 STDSNFLMKEVKSLSDVKTDTEEDS-RTTTRETITGKLFDTLLYSSRKEERCAGT 974
>At2g19480.1 68415.m02277 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 379
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 95 IQEIILEEAINIKANDS-DVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACDNQVEI 153
I+E I+ A++ ++ + DD+ +++ D +DD+ +E + + ED D++ E
Sbjct: 282 IKEKIISHAVSWFTGEAVEADDLDIEDDDDEIDEDDDEEDEEDDEDDEEEDDEDDDEEEE 341
Query: 154 LELNVKSAKR 163
+ KS K+
Sbjct: 342 ADQGKKSKKK 351
>At1g54920.2 68414.m06269 expressed protein
Length = 890
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 45 EELTDLILTDRLVSTIDRESRNLNSNLCTKLYKANHSDVCIQCDEND 91
E+L +L+ D L+S ++ ES S+ T+LYKA + D D
Sbjct: 617 EDLQNLLNNDVLISGVNLESLQPGSSGMTELYKALQEPKFRELDSED 663
>At1g54920.1 68414.m06270 expressed protein
Length = 430
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 45 EELTDLILTDRLVSTIDRESRNLNSNLCTKLYKANHSDVCIQCDEND 91
E+L +L+ D L+S ++ ES S+ T+LYKA + D D
Sbjct: 281 EDLQNLLNNDVLISGVNLESLQPGSSGMTELYKALQEPKFRELDSED 327
>At5g66840.1 68418.m08427 SAP domain-containing protein contains
Pfam domain PF02037: SAP domain
Length = 551
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 101 EEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTACDNQVEILELNVK 159
EE ++ ++++ D+ + + + TN SEDD +D +D A ++ VE E+ VK
Sbjct: 16 EEEEDVFGDENNYDETEEEEDEDTNSSEDD------SDWSHDDDDATESDVEADEIGVK 68
>At5g63740.1 68418.m08000 zinc finger protein-related
Length = 226
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 88 DENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMME-DTA 146
++ D +E ++ +E + +D D DD ++ + +D EDDD +E + D E D
Sbjct: 75 EDADADEDEDEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDDDENDEE 134
Query: 147 CDNQVE 152
CD++ +
Sbjct: 135 CDDEYD 140
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 27.9 bits (59), Expect = 5.8
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 89 ENDKNEIQEIILEEAINIKA--NDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTA 146
EN NE + EA + N +DD++ ++ ++++ E TD D
Sbjct: 1157 ENIVNETYALHSVEAAEEETATNGESLDDVETTKSVLLEVRKEEEEAEMKTDAEPRLDAI 1216
Query: 147 CDNQVEILELNVKSAKRKLLRRDIKTKEAVNLKSSNDNGKIANEDYIDLSLFDIKYLSQE 206
++E ++ V+ AK + + E+ +LK N K A +L D + +S+E
Sbjct: 1217 EKEELETVKTVVQDAK-IVNNEETTAHESESLKGDNHQEKNAEPVEATQNLDDAEQISRE 1275
>At5g04410.1 68418.m00433 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) protein;
supporting cDNA gi|6456750|gb|AF201456.1|AF201456
Length = 567
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 170 IKTKEAVNLKSSNDNGKIANEDYIDLSLFDIKYLSQE 206
++ + VNL+SSN+N +A+ Y D+ + D YL E
Sbjct: 298 VQDENVVNLESSNNNVFVADTCYSDIPI-DHNYLPDE 333
>At4g25350.1 68417.m03648 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 745
Score = 27.9 bits (59), Expect = 5.8
Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 59 TIDRESRNLNSNLCTKLYKANHSDVCIQCDENDKNEIQEIILEE-AINIKANDSDVDDIK 117
T+DRE +N+ K+ A + + + + ++++ N DS +DI
Sbjct: 108 TLDREFNKVNNFYRLKVETARTEALALNKQMDALIAFRHKVMDQNQKNPSVFDSVSEDIN 167
Query: 118 YDNNMKTNDSEDDDFNETNTDVMMMEDTACDNQVEILELNVKSAKRKL--LRRDIKTKEA 175
+ + S+ + N D+M EDT+ ++ +E + +N L ++ +K +
Sbjct: 168 GSASEVGSSSKCTEHNVALADLMRNEDTSNESILERIRMNKTREITPLSAIKTILKVHKQ 227
Query: 176 VNLKSSNDNGK 186
LK + DN K
Sbjct: 228 DELKFTRDNLK 238
>At4g10480.1 68417.m01720 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 212
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 88 DENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTDVMMMEDTAC 147
+E ++ + + I E+ K ND V+D+ K D +DDD ++ + ++ D A
Sbjct: 7 EEVNEEALMDAIKEQMKLQKENDVVVEDV------KDGDEDDDDVDDDDDEI---ADGAG 57
Query: 148 DNQVEILELNVKSAKRKLLRRDIK 171
+N+ + K +++ +L+ +K
Sbjct: 58 ENEASKQSRSEKKSRKAMLKLGMK 81
>At1g12120.1 68414.m01404 expressed protein contains Pfam domain
PF05904: Plant protein of unknown function (DUF863)
Length = 483
Score = 27.9 bits (59), Expect = 5.8
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 55 RLVSTIDRESRNLNSNLCTKLYKANHSDVCIQ---C-DENDKNEIQEIILEEAINIKAND 110
R+ S R L + T+L N D+ + C +E+D +E+ ++ E ++I
Sbjct: 266 RIESRRSSSPRALQPSCRTRLEFTNTEDLLEENGCCNEEDDSSEVIQMAAESLVHISEIS 325
Query: 111 SDVDDIKYDNNMKTN-DSEDDDF 132
D++ ++TN SED DF
Sbjct: 326 YQNQDLQSKLVLRTNSSSEDQDF 348
>At5g08610.1 68418.m01024 DEAD box RNA helicase (RH26) strong
similarity to RNA helicase RH26 [Arabidopsis thaliana]
GI:3776025; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain; identical to cDNA DEAD box RNA helicase, RH26
GI:3776024
Length = 850
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 121 NMKTNDSEDDDFNET---NTDVMMMEDTACDNQVEILELNVKSAKRKLLRRDIKTKEAVN 177
+++ DS DDD N N D + ED++ ++ L K+A K ++ D T E V
Sbjct: 314 SLEEEDSSDDDENRVGLGNIDDLPSEDSSDEDDENDEPLIKKAASAKAVQTDKPTGEHVK 373
Query: 178 LKSS 181
S
Sbjct: 374 TSDS 377
>At3g53305.1 68416.m05879 cytochrome P450, putative very similar to
Cytochrome P450 71B8 (SP:P58048) [Arabidopsis thaliana]
Length = 338
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 6 DLNAAKNNEDYRRLSACRICLALGVKLYNMKKYK-LSMLYEELTDLIL-----TDRLVST 59
D+ + ED+R + +G++L++ KK+K + EE DL++ + + +
Sbjct: 48 DIGFTQYGEDWREMKKL-----VGLELFSPKKHKSFRYIREEEGDLLVKKISNSAQTQTL 102
Query: 60 IDRESRNLNSNLCTKLYKANHSDVCIQCDENDKNEIQEIILEEAIN 105
ID + + T +++ QCD D + ++E++LE N
Sbjct: 103 IDLRKASFSFTAGT-IFRLAFGQNFHQCDFMDMDRLEELVLEAETN 147
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 125 NDSEDDDFNETNTDVMMMEDTACDNQVEILELNVK 159
N++ +F E TDV++++ C IL L K
Sbjct: 1193 NEAHQREFEEKETDVLLLKSQLCTKTETILRLQEK 1227
>At2g32910.1 68415.m04035 expressed protein
Length = 691
Score = 27.5 bits (58), Expect = 7.7
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 79 NHSDVCIQCDENDKNEIQEIILEEAINIKANDSDVDDIKYDNNMKTNDSEDDDFNETNTD 138
N+ DV ++ +E D NE+ E + ++ KA+D V+ + D N + E +T+
Sbjct: 28 NNGDVVVEAEEKDGNEVVEPV--DSGKSKADDEFVESL-LDTNQDLATFK-IPVEENDTE 83
Query: 139 VMMMEDTACDNQVEILELNVKS-----AKRKLLRR 168
+ +E+ + VE +K AK K++++
Sbjct: 84 NVTVEEPSLPASVEATSSGMKKPQGLPAKTKIVKK 118
>At2g25170.1 68415.m03010 chromatin remodeling factor CHD3 (PICKLE)
identical to chromatin remodeling factor CHD3
[Arabidopsis thaliana] GI:6478518
Length = 1384
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 164 KLLRRDIKTKEAVNLKSSNDNG-----KIANEDYID 194
KLL RD+ E V++ +NG K+AN +YID
Sbjct: 791 KLLDRDLVEAEEVSVDDEEENGFLKAFKVANFEYID 826
>At1g05430.1 68414.m00551 expressed protein
Length = 269
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 171 KTKEAVNLKSSNDNGKIANEDYIDL 195
KTK+ + S N +G++A ED +D+
Sbjct: 193 KTKQTLQNSSGNSDGEMAEEDVLDI 217
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.130 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,350,634
Number of Sequences: 28952
Number of extensions: 229731
Number of successful extensions: 1057
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 965
Number of HSP's gapped (non-prelim): 105
length of query: 222
length of database: 12,070,560
effective HSP length: 78
effective length of query: 144
effective length of database: 9,812,304
effective search space: 1412971776
effective search space used: 1412971776
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 58 (27.5 bits)
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