Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001738-TA|BGIBMGA001738-PA|IPR007087|Zinc finger,
C2H2-type
(411 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 77 6e-15
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 69 9e-13
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 62 1e-10
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 57 5e-09
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 55 2e-08
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 54 5e-08
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 53 6e-08
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 48 2e-06
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 48 3e-06
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 46 7e-06
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 44 3e-05
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 41 4e-04
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 40 5e-04
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 31 0.39
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 29 0.91
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 29 0.91
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 29 1.2
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 28 2.1
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 28 2.8
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 28 2.8
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 27 3.7
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 27 4.8
SPCC4B3.12 |set9||histone lysine methyltransferase Set9|Schizosa... 27 6.4
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 27 6.4
SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing] |Schizos... 27 6.4
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 6.4
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 26 8.4
SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|S... 26 8.4
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 26 8.4
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 76.6 bits (180), Expect = 6e-15
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 216 FNC--ETCGEGFHDENEYITHTAIGHVKLKPFECNI--CHKRFTQQGGLMQHMRMHTGDR 271
F+C E CG+ + + H H +PF C+ C K F ++ L H R HT +
Sbjct: 23 FHCPYEECGKKYSRPSLLEQHLRT-HSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVK 81
Query: 272 PYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRT-HTNV 326
P+ C+Y C F + L++H+ +H K KPY C C + F + L+ H+ HT++
Sbjct: 82 PFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHL 141
Query: 327 APFQCGI--CEKRYKQSSHLNYHL 348
P+ C CE R+ L H+
Sbjct: 142 LPYPCTYQDCELRFATKQKLQNHV 165
Score = 72.5 bits (170), Expect = 1e-13
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 249 ICHKRFTQQGGLMQHMRMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI- 305
+CH F + ++ + + + + C Y C K +++ S L+QHLR H+ +P+ C
Sbjct: 1 MCH--FNELSIEIESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYT 58
Query: 306 -CSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLKNH 351
CSK F + HLK H R HTNV PF C C+ ++ HL H++ H
Sbjct: 59 GCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVH 107
Score = 66.5 bits (155), Expect = 6e-12
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 215 PFNC--ETCGEGFHDENEYITHTAIGHVKLKPFECNI--CHKRFTQQGGLMQHMRM-HTG 269
PF+C + C F+ + H + H K KP+ C C + F++ L H+ HT
Sbjct: 82 PFSCHYDGCDAQFYTQQHLERHIEV-HRKPKPYACTWEGCDECFSKHQQLRSHISACHTH 140
Query: 270 DRPYPCNY--CPKSFTQKSGLDQHL-RIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNV 326
PYPC Y C F K L H+ R H K+ Y C S + ++ H
Sbjct: 141 LLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIRE 200
Query: 327 APF-QCGICEKRYKQSSHLNYHLKNHNPANLTEEQRAKY 364
A C IC +++K ++HL +H+ H T E+R Y
Sbjct: 201 AHVPSCSICGRQFKTAAHLRHHVVLH---QTTLEERKTY 236
Score = 44.0 bits (99), Expect = 4e-05
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 223 EGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGD----RPYPCNY- 277
EGF ++ H HV C+IC ++F L H+ +H + Y C
Sbjct: 186 EGFEKWSQLQNHIREAHVP----SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPME 241
Query: 278 -CPKSFTQKSGLDQHLR-IHTKVKPYRCVICSKTFCQSVHLKQHMRTHT 324
C KSFT+ S L +H+ IH + C C F L++H+ T
Sbjct: 242 GCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGT 290
Score = 27.5 bits (58), Expect = 3.7
Identities = 31/135 (22%), Positives = 50/135 (37%), Gaps = 8/135 (5%)
Query: 219 ETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHT---GDRPYPC 275
E C + F + H ++ H F C+ C +F + L +H+ T +PY
Sbjct: 241 EGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPY-I 299
Query: 276 NYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSV--HLKQHMRTHTNVAPFQCGI 333
N C G+ H + ++ +K V H + R ++ P +C
Sbjct: 300 NECGIKHDGIEGVAIHDQKEKELSSNLVSDVAKKIINEVTGHGYKEAREYSCSFP-ECNY 358
Query: 334 CEKR-YKQSSHLNYH 347
KR Y HLN H
Sbjct: 359 RFKRLYDMHRHLNSH 373
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 69.3 bits (162), Expect = 9e-13
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 250 CHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKT 309
C+KRFT+ L HM HT RP+ C+ C KSF ++ +H ++HT +K + CV C++
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 310 FCQSVHLKQHMRT 322
F + L +H ++
Sbjct: 637 FARMDALNRHYKS 649
Score = 67.3 bits (157), Expect = 4e-12
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 273 YPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQ 330
Y C + C K FT+ L H+ HT +P++C IC K+F + ++H + HT + F
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFA 629
Query: 331 CGICEKRYKQSSHLNYHLKN 350
C C +R+ + LN H K+
Sbjct: 630 CVTCNQRFARMDALNRHYKS 649
Score = 51.6 bits (118), Expect = 2e-07
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 306 CSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKNH 351
C+K F ++ +LK HM THTN PFQC IC+K + + H + H
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLH 622
Score = 51.2 bits (117), Expect = 3e-07
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 239 HVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLR 293
H +PF+C+IC K F +Q +H ++HTG + + C C + F + L++H +
Sbjct: 594 HTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 39.5 bits (88), Expect = 8e-04
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 215 PFNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTG 269
PF C C + F +++ H + H +K F C C++RF + L +H + G
Sbjct: 599 PFQCSICKKSFARQHDKRRHEQL-HTGIKAFACVTCNQRFARMDALNRHYKSEVG 652
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 62.5 bits (145), Expect = 1e-10
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 270 DRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVA 327
D Y C Y C K +K ++ H++ H +PYRC +C F + LK+H+R H N
Sbjct: 440 DGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGR 499
Query: 328 PFQCGICEKRYKQSSHLNYH 347
P+ C C KR+ + LN H
Sbjct: 500 PYVCE-CLKRFNRLDALNRH 518
Score = 59.7 bits (138), Expect = 7e-10
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 248 NICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICS 307
N C+KR ++ + H++ H DRPY C+ C F + L +HLRIH +PY C C
Sbjct: 448 NGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CL 506
Query: 308 KTFCQSVHLKQH 319
K F + L +H
Sbjct: 507 KRFNRLDALNRH 518
Score = 47.6 bits (108), Expect = 3e-06
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 239 HVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQH 291
H+ +P+ C++C F + L +H+R+H RPY C C K F + L++H
Sbjct: 467 HLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
Score = 37.9 bits (84), Expect = 0.003
Identities = 12/46 (26%), Positives = 27/46 (58%)
Query: 306 CSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKNH 351
C+K + +++ H++TH + P++C +C+ + + L HL+ H
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
Score = 32.7 bits (71), Expect = 0.097
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 215 PFNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQH 263
P+ C+ C GF ++ H I H +P+ C C KRF + L +H
Sbjct: 472 PYRCDLCKAGFVRHHDLKRHLRI-HENGRPYVCE-CLKRFNRLDALNRH 518
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 56.8 bits (131), Expect = 5e-09
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 242 LKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTK 297
+K +EC C + F +Q ++H+R HTG++P+ C+Y C K FT++ L +H+R H +
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLR 58
Score = 50.8 bits (116), Expect = 3e-07
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 298 VKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLKNH-NPA 354
+K Y C C + F + H +H+R+HT PF+C C+KR+ + L H++ H A
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKA 60
Query: 355 NLTEEQ 360
+T EQ
Sbjct: 61 LVTPEQ 66
Score = 44.4 bits (100), Expect = 3e-05
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 271 RPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVA 327
+ Y C +C + F ++ +H+R HT KP+ C C K F + L +H+RTH A
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKA 60
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 299 KPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLKNHNPAN 355
+PY+C +C+K F + H +H+RTHT P C C KR+ +S L H + H AN
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNAN 82
Score = 54.4 bits (125), Expect = 3e-08
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 243 KPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKP 300
+P++C +C K F + +H+R HTG++P+ C + C K F++ L +H RIHT
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANS 83
Query: 301 YR 302
R
Sbjct: 84 RR 85
Score = 53.2 bits (122), Expect = 6e-08
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 271 RPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTN 325
RPY C C K+F + +H+R HT KP+ C C+K F +S L +H R HTN
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 53.6 bits (123), Expect = 5e-08
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 280 KSFTQKSGLDQHLRIHTKVKP-YRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQCGICEK 336
+SFT+K L + R H P + C C K+F + HL++H RTH NV F C C +
Sbjct: 5 ESFTEKP-LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNR 63
Query: 337 RYKQSSHLNYHLKN-H-NPANLTEEQRAKYAELIG 369
+ +S LN H++ H NL+E + + +G
Sbjct: 64 AFARSDVLNRHVQQMHLQKQNLSERRMLNASCFLG 98
Score = 53.6 bits (123), Expect = 5e-08
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 254 FTQQGGLMQHMRMHT-GDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTF 310
FT++ L + R H GD + C Y CPKSFT+K L +H R H VK + C C++ F
Sbjct: 7 FTEKP-LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAF 65
Query: 311 CQSVHLKQHMR 321
+S L +H++
Sbjct: 66 ARSDVLNRHVQ 76
Score = 37.9 bits (84), Expect = 0.003
Identities = 13/44 (29%), Positives = 27/44 (61%)
Query: 250 CHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLR 293
C K FT++ L +H R H + + C++C ++F + L++H++
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 221 CGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHM-RMH 267
C + F E++ H +K F C+ C++ F + L +H+ +MH
Sbjct: 33 CPKSF-TRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 53.2 bits (122), Expect = 6e-08
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 269 GDRPYPCNYCPKSFTQKSGLDQHLR-IHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVA 327
G + + C C K F + L +H+R +HT KP+ C IC K F + +L+QH R H N +
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNAS 477
Query: 328 P 328
P
Sbjct: 478 P 478
Score = 50.4 bits (115), Expect = 5e-07
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 243 KPFECNICHKRFTQQGGLMQHMR-MHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKP 300
K F C C K+F + L +H+R +HT ++P+ C C K F+++ L QH R+H P
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 44.4 bits (100), Expect = 3e-05
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 216 FNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRP-YP 274
F C C + F H H KPF C IC KRF+++ L QH R+H P
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLA 481
Query: 275 CNYCPKSF 282
C + P +
Sbjct: 482 CFFQPSGY 489
Score = 28.3 bits (60), Expect = 2.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 329 FQCGICEKRYKQSSHLNYHLKN 350
F C C K++K+S HL H+++
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRS 444
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 48.4 bits (110), Expect = 2e-06
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIH 295
+ C C + F++ L H HTG+RP+ C+Y C K+F +S + +H RIH
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 301 YRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLKNH 351
YRC C + F + LK H +HT PF C C K + S++ H + H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 36.7 bits (81), Expect = 0.006
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 273 YPCNYCPKSFTQKSGLDQHLRIHTKVKPYRC--VICSKTFCQSVHLKQHMRTH 323
Y C C + F++ S L H HT +P+ C C K F ++++H R H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 47.6 bits (108), Expect = 3e-06
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 297 KVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQC 331
KVK Y C C++ F + HLK+H+R+HTN PF C
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
Score = 39.9 bits (89), Expect = 6e-04
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 241 KLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNY-------CPKSFTQKSGLDQH-L 292
K+K + C C + F + L +H+R HT ++P+ C+ C + F+++ L +H
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQ 125
Query: 293 RIHTKVKPYR 302
+IH +P R
Sbjct: 126 KIHRNPQPRR 135
Score = 35.5 bits (78), Expect = 0.014
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 271 RPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRC 303
+ Y C C ++F + L +H+R HT KP+ C
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 46.4 bits (105), Expect = 7e-06
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 269 GDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHM 320
GD Y C++ C KSFT+K +H R HT K + C CS +F +S L +H+
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 43.2 bits (97), Expect = 7e-05
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 301 YRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHL 348
Y+C C+K+F + H ++H R+HTN F C C + +S LN H+
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 40.7 bits (91), Expect = 4e-04
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 245 FECNI--CHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHL 292
++C+ C K FT++ +H R HT + + C +C SFT+ L++H+
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 44.4 bits (100), Expect = 3e-05
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHL-RIH 295
F C+ C KRFT+ L +H H+ P PC YC +K L +H+ R H
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 42.3 bits (95), Expect = 1e-04
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 271 RPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTN 325
R +PC+ C K FT+ L +H H+K +P C C + LK+H++ N
Sbjct: 29 RVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHN 83
Score = 40.3 bits (90), Expect = 5e-04
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 301 YRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKN-HNPANLTEE 359
+ C C+K F + +L +H H+ P C CE + K+ L H++ HN ++ EE
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKSVIEE 90
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 40.7 bits (91), Expect = 4e-04
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 267 HTGDR--PYPCNY--CPKSF---TQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLK 317
H G+R Y C + CP+ T + L HLR HT KP+ C + C ++F +S L
Sbjct: 65 HIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALA 124
Query: 318 QHMRT 322
+HMRT
Sbjct: 125 KHMRT 129
Score = 40.7 bits (91), Expect = 4e-04
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 255 TQQGGLMQHMRMHTGDRPYPCNY--CPKSFTQKSGLDQHLR 293
T + L+ H+R HTG++P+ C+ C +SFT+ L +H+R
Sbjct: 88 TSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
Score = 33.5 bits (73), Expect = 0.056
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 239 HVKLKPFECNI--CHKRFTQQGGLMQHMR-MHTGDRPYPCNYCPKS 281
H KPF C++ C + FT+ L +HMR +H D P + PK+
Sbjct: 100 HTGEKPFICSVPECDRSFTRSDALAKHMRTVHEADTLRPSDPIPKA 145
Score = 31.1 bits (67), Expect = 0.30
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 316 LKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLKNHNPAN 355
L H+R+HT PF C + C++ + +S L H++ + A+
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 40.3 bits (90), Expect = 5e-04
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 270 DRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVA 327
D+PY C C K++ ++GL H ++H P I + T H Q
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYH-KLHGHCSP----ITTPTPAPIPH--QGFVVENK-- 397
Query: 328 PFQCGICEKRYKQSSHLNYH-LKNHNPANLTEEQR 361
P++C +C KRYK + L YH +H ++ + QR
Sbjct: 398 PYRCEVCSKRYKNLNGLKYHRTHSHLQVSMAQAQR 432
Score = 30.3 bits (65), Expect = 0.52
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 240 VKLKPFECNICHKRFTQQGGLMQHMRMHT 268
V+ KP+ C +C KR+ GL H R H+
Sbjct: 394 VENKPYRCEVCSKRYKNLNGLKYH-RTHS 421
Score = 29.1 bits (62), Expect = 1.2
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 13/90 (14%)
Query: 212 VQFPFNCET--CGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTG 269
V P+ C C + + ++N H GH C T + H
Sbjct: 346 VDKPYKCPVPNCDKAYKNQNGLKYHKLHGH----------CSPITTPTPAPIPHQGFVVE 395
Query: 270 DRPYPCNYCPKSFTQKSGLDQHLRIHTKVK 299
++PY C C K + +GL H R H+ ++
Sbjct: 396 NKPYRCEVCSKRYKNLNGLKYH-RTHSHLQ 424
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 30.7 bits (66), Expect = 0.39
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 303 CVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKNHNPANLTEEQRA 362
CV+C+ F + H + TH +++ GIC+ ++ +++ + K HN + +E++
Sbjct: 120 CVLCAPCFHATNH--EGHETHVSISTSYSGICDCGDPEAWNVDLNCKIHNVPD--DEEQK 175
Query: 363 KYAELIGL 370
K E+I L
Sbjct: 176 KPEEVIPL 183
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 29.5 bits (63), Expect = 0.91
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 333 ICEKRYKQSSHLNYHLKNHNPANLTEEQRAKYAELIGLISKEVVEV--QIDSNEQILPYD 390
+ EK+ ++ S +Y + N E + K EL+ KE+ E+ QI+ N+Q L
Sbjct: 105 LVEKQLEEQS-TSYQKEIEEVRNEKEATQVKIHELLDAKWKEIAELKTQIEKNDQALSEK 163
Query: 391 NSNMVTDEQFVQ 402
N ++ Q +Q
Sbjct: 164 NHEVMVSNQALQ 175
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 29.5 bits (63), Expect = 0.91
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 312 QSVHLK-QHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKNHNP 353
Q +HL Q+ H NVA ++Y Q +H+N H ++P
Sbjct: 120 QQLHLNHQYQHQHKNVAANSIDNLSRQYSQPNHINTHDSVNSP 162
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 141 ASRRNRETKV--ITGPFECLQPSTCQQLTGGDGLCHQIFFSCCEYSLHHRDEHTKRRKGI 198
A R+ R+ K GP C T Q G+ +C+ +F + H H K R
Sbjct: 556 AQRKRRKFKFGKQIGPVRC----TLQNRVTGE-ICNTVFSRTYDLIRHQDTIHAKTRPVF 610
Query: 199 RCQVC 203
RC++C
Sbjct: 611 RCEIC 615
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Query: 182 EYSLHHRDEHTKRRKGIRCQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGHVK 241
E S+ HR R+ I C VC+KP + + + G D ++ H A K
Sbjct: 243 ETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAKGSSLADSLKHFVH-AEKLTK 301
Query: 242 LKPFECNIC 250
+ C C
Sbjct: 302 QNKYRCENC 310
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 27.9 bits (59), Expect = 2.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 213 QFPFNCETCGEGFHDENEYITHTA 236
+F NCE C + F+ E Y +H A
Sbjct: 67 EFYQNCEVCNKKFYSEGAYSSHMA 90
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 219 ETCGEGFHDENEYITHTAIGHVKLKP------FECNICHKRFTQQGGLMQHMRMH 267
E GE H+ + T++ + +P F C+ C F +Q GL H R +
Sbjct: 107 ELKGEESHNSPGTLNGTSVANASKQPNMPNATFRCDKCDMMFVKQSGLTNHKRTY 161
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 27.5 bits (58), Expect = 3.7
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 346 YHLKNHNPANLTEEQRAKYAELIGLISKEVVEVQIDSNE--QILPYDNSNMVT 396
Y KN PA +Q + + + + L S + + ++LPY NS MVT
Sbjct: 446 YFAKNKQPATKLVQQASDFDQYVSLYSGYLQGFSDNFRPYVELLPYKNSRMVT 498
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 338 YKQSSHLNYHLKNHNPANLTEEQRAKYAELI 368
Y SSH+ +HL+N++ NL ++ + + LI
Sbjct: 138 YSSSSHVLWHLRNYHYLNLDQDIQEENDSLI 168
>SPCC4B3.12 |set9||histone lysine methyltransferase
Set9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 441
Score = 26.6 bits (56), Expect = 6.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 36 KGFVSQIALTNHARMEHIDSYATGDPSIW 64
K +S++A+TNH+ + ++D Y +W
Sbjct: 325 KRLLSEMAITNHSPLLNVDDYRKFREDLW 353
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 26.6 bits (56), Expect = 6.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 365 AELIGLISKEVVEVQIDSNEQILPYDNSNMVTDE 398
AEL IS E+ E+ +DS + ++S++V+D+
Sbjct: 1418 AELFTNISPEIKELSVDSTSTLGGLNSSHLVSDQ 1451
>SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing]
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 26.6 bits (56), Expect = 6.4
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Query: 222 GEGFHDENEYITHTAIGHVKLKPFECNICHKR 253
G FH E +THT +G +K F ICH +
Sbjct: 185 GLQFHPE---VTHTPLGLQLIKNFAIEICHAK 213
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.6 bits (56), Expect = 6.4
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 330 QCGICEKRYKQSSHLNYHLKNHNPANLTEEQRAKYAELIGLISKEVVEVQIDSNEQILPY 389
Q IC + +QS+H+ +LK+ N + + + K A+L L SK + +Q D+
Sbjct: 766 QLSICNSQLEQSNHIVDNLKSENLLLTSVKDKLK-ADLSNLESK-LSSLQQDNFHMKAQI 823
Query: 390 DNSN 393
++SN
Sbjct: 824 ESSN 827
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 290 QHLRIHTKVKPYRCVICSKTFCQ 312
Q++ I K + YRC+ S T CQ
Sbjct: 468 QNIPIQKKYESYRCLFISGTICQ 490
>SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor
Raf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 26.2 bits (55), Expect = 8.4
Identities = 15/70 (21%), Positives = 29/70 (41%)
Query: 38 FVSQIALTNHARMEHIDSYATGDPSIWTETKIFINNEKPIPNGKMKIDEDLVKIKTEEVI 97
F + + + H R AT +W+E+ FI + ++I++++ + E
Sbjct: 155 FQAILLVQKHIRFLLTQMVATSSLHVWSESPFFIRIRSSYEHLILQINKNIYNARQERKK 214
Query: 98 SSLEPTNIMD 107
S L N D
Sbjct: 215 SKLSSNNPSD 224
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 61 PSIWTETKIFINNEKPIPNGKMKIDEDLVKIKTEEVIS 98
PSI K+ + N + +PN K + ++K T E+++
Sbjct: 314 PSILQNFKVSLVNVENVPNEPFKRQDPVIKAVTSEIMN 351
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.134 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,984,022
Number of Sequences: 5004
Number of extensions: 84323
Number of successful extensions: 310
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 210
Number of HSP's gapped (non-prelim): 78
length of query: 411
length of database: 2,362,478
effective HSP length: 74
effective length of query: 337
effective length of database: 1,992,182
effective search space: 671365334
effective search space used: 671365334
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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