Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001738-TA|BGIBMGA001738-PA|IPR007087|Zinc finger,
C2H2-type
(411 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 59 7e-09
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 54 2e-07
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 53 4e-07
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 52 1e-06
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 48 2e-05
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 46 6e-05
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 46 7e-05
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 44 3e-04
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 37 0.026
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 36 0.059
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 36 0.059
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 36 0.078
09_02_0366 + 7941550-7942161,7942230-7942775 34 0.18
05_03_0281 + 11560402-11560569,11561373-11561579,11562966-115631... 34 0.24
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 33 0.42
07_03_1094 + 23919878-23920520,23921297-23921363,23921364-239214... 33 0.42
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 33 0.42
01_01_0990 + 7847066-7847478,7847713-7848679 33 0.55
02_04_0539 - 23745936-23746097,23746661-23747566 32 0.73
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 32 0.96
07_03_1165 - 24459156-24460139 32 0.96
03_02_0404 - 8165211-8165318,8165397-8165733,8166031-8166242,816... 31 1.3
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 31 1.7
03_05_0255 + 22435027-22435072,22436022-22437085 31 1.7
03_04_0188 - 18241815-18242477 31 1.7
12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,730... 31 2.2
07_01_0404 + 3093851-3094051,3094622-3094948,3096685-3096798,309... 31 2.2
07_01_0400 + 3048607-3048807,3049378-3049704,3051441-3051554,305... 31 2.2
07_01_0396 + 3016900-3017175,3017926-3018039,3018138-3018350,301... 31 2.2
02_04_0316 - 21978330-21979397 31 2.2
02_01_0007 - 48497-48880 31 2.2
01_06_1412 - 37140654-37141088,37141549-37142214 31 2.2
01_06_1284 + 35994595-35995074 31 2.2
10_08_0460 - 18098187-18098248,18098331-18098399,18098468-180994... 30 2.9
09_06_0349 + 22457820-22457987,22458202-22458246,22458597-224586... 30 2.9
07_03_0080 + 13193001-13193312 30 2.9
05_05_0022 + 21592403-21593083,21593720-21594208 30 2.9
02_05_1255 - 35279751-35280338 30 2.9
01_06_1614 - 38648495-38649706 30 2.9
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 30 3.9
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 30 3.9
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 30 3.9
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 30 3.9
03_01_0068 - 546475-546615,546709-546819,547449-547482,547582-54... 30 3.9
12_01_0454 + 3580332-3581714 29 5.1
08_02_1602 - 28148255-28149413,28151927-28152087 29 5.1
06_03_0743 + 24069752-24070483,24071890-24072345 29 5.1
05_01_0374 + 2924611-2924994 29 5.1
02_05_0201 + 26687369-26689228 29 5.1
01_01_1052 + 8297105-8297422,8298978-8299310,8299820-8301010 29 5.1
11_01_0357 + 2715271-2715509,2716200-2716281,2717117-2717251,271... 29 6.8
09_04_0564 + 18565583-18566449,18569662-18570123 29 6.8
09_01_0106 + 1673737-1674522,1674625-1675089 29 6.8
08_02_1172 + 24898290-24899141,24900864-24901328 29 6.8
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 29 6.8
03_06_0607 + 35037467-35038624 29 6.8
03_01_0343 - 2699518-2700114 29 6.8
05_05_0036 - 21758409-21758531,21758891-21759206,21759964-217611... 29 9.0
03_04_0187 - 18236041-18236643 29 9.0
01_06_1495 + 37769982-37771496 29 9.0
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 58.8 bits (136), Expect = 7e-09
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 194 RRKGIRCQVCEKPMSVDAV-QFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHK 252
+RKG + Q + + + V +FP + E C F + + + H + P + C K
Sbjct: 1209 KRKGSKHQATDGLRAGNKVAKFPCDIEGCDMSFSTQQDLLLHKR----DICPVKG--CKK 1262
Query: 253 RFTQQGGLMQHMRMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSK 308
+F L+QH ++H +RP C + C K+F +H+R+HT V+PY C C +
Sbjct: 1263 KFFCHKYLLQHRKVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYECQEPGCGQ 1322
Query: 309 TFCQSVHLKQHMR 321
TF +H R
Sbjct: 1323 TFRFVSDFSRHKR 1335
Score = 49.6 bits (113), Expect = 4e-06
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 241 KLKPFECNI--CHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKV 298
K+ F C+I C F+ Q L+ H R P C K F L QH ++H
Sbjct: 1226 KVAKFPCDIEGCDMSFSTQQDLLLHKRDIC-----PVKGCKKKFFCHKYLLQHRKVHIDE 1280
Query: 299 KPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQC 331
+P +C C K F +HMR HT V P++C
Sbjct: 1281 RPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYEC 1315
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 54.4 bits (125), Expect = 2e-07
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Query: 205 KPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHM 264
KP + F + E CG+ F D H + + + + C K+F L +H
Sbjct: 78 KPEPTTEILFLCSYENCGKTFVDVAALRKHAHVHNERQYICQEPGCGKKFVDSSKLKRHH 137
Query: 265 RMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHM 320
+HTG + + C + C K+F+ L HL+ H + C C K F LK H+
Sbjct: 138 LIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSHV 197
Query: 321 RTH 323
+ H
Sbjct: 198 KGH 200
Score = 45.2 bits (102), Expect = 1e-04
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 275 CNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQ 330
C+Y C K+F + L +H +H + + Y C C K F S LK+H HT F
Sbjct: 89 CSYENCGKTFVDVAALRKHAHVHNE-RQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDFI 147
Query: 331 CGI--CEKRYKQSSHLNYHLKNH 351
C C K + +L HLK H
Sbjct: 148 CPHPGCGKAFSLDFNLRSHLKTH 170
Score = 38.7 bits (86), Expect = 0.008
Identities = 42/146 (28%), Positives = 54/146 (36%), Gaps = 12/146 (8%)
Query: 221 CGEGFHDENEYITHT---AIGHVKLKPFECNICHKRFTQQGGLMQHMRMH--TGDRPYPC 275
CG+ F + +H A+ + + PF C KRFT L H++ H TG P
Sbjct: 153 CGKAFSLDFNLRSHLKTHALENYHVCPFPA--CGKRFTSDSKLKSHVKGHEKTGT-PITA 209
Query: 276 NYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGI-- 333
Y P S +S TK P T S T P+ C
Sbjct: 210 QYVPSSDKPQSSSKPATPATTK--PTTPAATKTTTPASTKPTTPAPTSFAERPYVCPYDG 267
Query: 334 CEKRYKQSSHLNYHLKNHNPANLTEE 359
C K Y S LN HLK +P + EE
Sbjct: 268 CGKAYIHSYKLNLHLKTQHPEHGQEE 293
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 53.2 bits (122), Expect = 4e-07
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 211 AVQFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGD 270
AV++ + E C F + + H + + P + C K+F L+QH ++HT D
Sbjct: 1083 AVEYSCDIEGCSMSFRTKRDLSLHKS----DICPVKG--CGKKFFSHKYLLQHRKVHTDD 1136
Query: 271 RPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRC--VICSKTFCQSVHLKQHMR 321
RP C + C +F +HLR+HT +PY C C++TF +H R
Sbjct: 1137 RPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVCHEPGCAQTFRFVSDFSRHKR 1191
Score = 38.7 bits (86), Expect = 0.008
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 274 PCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQC 331
P C K F L QH ++HT +P C C+ F +H+R HT P+ C
Sbjct: 1112 PVKGCGKKFFSHKYLLQHRKVHTDDRPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVC 1171
Query: 332 GI--CEKRYKQSSHLNYHLKNHNPANLTEEQRAK 363
C + ++ S + H K ++ ++++AK
Sbjct: 1172 HEPGCAQTFRFVSDFSRH-KRKTGHSVKKKKKAK 1204
Score = 31.5 bits (68), Expect = 1.3
Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 273 YPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQ 330
Y C+ C SF K L H VK C K F +L QH + HT+ P
Sbjct: 1086 YSCDIEGCSMSFRTKRDLSLHKSDICPVKG-----CGKKFFSHKYLLQHRKVHTDDRPLT 1140
Query: 331 CGI--CEKRYKQSSHLNYHLKNH 351
C C +K HL+ H
Sbjct: 1141 CPWKGCNMAFKWPWARTEHLRVH 1163
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 51.6 bits (118), Expect = 1e-06
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 223 EGFHDENEYITHTAIGHVKLKPFECNICH-----KRFTQQGGLMQHMRMHTGDRPYPCNY 277
E F + E+ T +L+ + NIC KRF+ L +H +H +RP+ C +
Sbjct: 792 EAFQCDIEFCDMTFETKAELRAHQRNICTDESCGKRFSSHKYLKRHQCVHRDERPFKCPW 851
Query: 278 --CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTF 310
CP +F +H+R+HT +PY+C C ++F
Sbjct: 852 DGCPMTFKWLWAQTEHIRVHTGERPYKCSAPDCGQSF 888
Score = 48.8 bits (111), Expect = 8e-06
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 11/118 (9%)
Query: 241 KLKPFECNI--CHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKV 298
K++ F+C+I C F + L H R D C K F+ L +H +H
Sbjct: 790 KVEAFQCDIEFCDMTFETKAELRAHQRNICTDES-----CGKRFSSHKYLKRHQCVHRDE 844
Query: 299 KPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLKNHN 352
+P++C C TF +H+R HT P++C C + ++ S + H K N
Sbjct: 845 RPFKCPWDGCPMTFKWLWAQTEHIRVHTGERPYKCSAPDCGQSFRYVSDYSRHRKKFN 902
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 47.6 bits (108), Expect = 2e-05
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 205 KPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNI--CHKRFTQQGGLMQ 262
KP V F + E CG+ F D H + H + + + C+ C K+F L +
Sbjct: 34 KPEPTTEVLFLCSYEGCGKTFVDAGALRKHAHV-HGE-RQYVCHYAGCDKKFLDSSKLKR 91
Query: 263 HMRMHTGDRPYPCNY--CPK--SFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHL 316
H +HTG++ + C + C K +F+ L H++ H+ + C C++ F Q L
Sbjct: 92 HFLIHTGEKNFVCPHEGCGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQESKL 151
Query: 317 KQHMR 321
+ H++
Sbjct: 152 RAHIK 156
Score = 40.7 bits (91), Expect = 0.002
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 275 CNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQ 330
C+Y C K+F L +H +H + + Y C C K F S LK+H HT F
Sbjct: 45 CSYEGCGKTFVDAGALRKHAHVHGE-RQYVCHYAGCDKKFLDSSKLKRHFLIHTGEKNFV 103
Query: 331 CGI--CEK--RYKQSSHLNYHLKNHNPAN 355
C C K + +L H+K H+ N
Sbjct: 104 CPHEGCGKVLAFSLDFNLKAHMKTHSVDN 132
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 46.0 bits (104), Expect = 6e-05
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 24/167 (14%)
Query: 213 QFPFNCETCGEGF-HDENEYITHTAIGHVKLKPFECNI--CHKRFTQQGGLMQHMR-MHT 268
Q PF+C G F + +++ + H + K F C + C+++FT +G + +H++ MH
Sbjct: 284 QRPFSCHVDGCPFSYSRKDHLNRHLLTH-QGKLFACPMEGCNRKFTIKGNIQRHVQEMHK 342
Query: 269 GDRPY--------PCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVH----- 315
P P C K+F S L +H H K+ Y VIC + C
Sbjct: 343 DGSPCESKKEFICPEENCGKTFKYASKLQKHEESHVKL-DYSEVICCEPGCMKAFTNLEC 401
Query: 316 LKQHMRT-HTNVAPFQCGICEKRYKQSSHLNYHLKNHNPANLTEEQR 361
LK H ++ H +V C +C + + + H + H + +TE R
Sbjct: 402 LKAHNKSCHRHVV---CDVCGTK-QLKKNFKRHQRMHEGSCVTERVR 444
Score = 39.1 bits (87), Expect = 0.006
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 260 LMQHMRMHT-GDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSV 314
L Q +HT RP+ C+ CP S+++K L++HL H + K + C + C++ F
Sbjct: 273 LHQECLVHTLFQRPFSCHVDGCPFSYSRKDHLNRHLLTH-QGKLFACPMEGCNRKFTIKG 331
Query: 315 HLKQHMR-THTNVAP------FQC--GICEKRYKQSSHLNYHLKNHNPANLTE 358
++++H++ H + +P F C C K +K +S L H ++H + +E
Sbjct: 332 NIQRHVQEMHKDGSPCESKKEFICPEENCGKTFKYASKLQKHEESHVKLDYSE 384
Score = 39.1 bits (87), Expect = 0.006
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 247 CNICHKRFTQQGGLMQHMRMHTGD---RPYPCNY--CPKSFTQKSGLDQHLR-IHTKVKP 300
C++C + ++ +H RMH G C+ C SF++KS LD+H++ +H + +P
Sbjct: 415 CDVCGTKQLKKN-FKRHQRMHEGSCVTERVRCHLKDCKLSFSKKSNLDKHVKAVHEQKRP 473
Query: 301 YRCVI--CSKTFCQSVHLKQHMRTHTNV 326
+ C C K+F H ++ +V
Sbjct: 474 FVCGFSGCGKSFSYKHVRDNHEKSSAHV 501
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 45.6 bits (103), Expect = 7e-05
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 16/119 (13%)
Query: 247 CNICHKRFTQQGGLMQHMRMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCV 304
C C F + L QHM+ H+ +R + C CP S+ +K L++H+ H + K + C
Sbjct: 62 CQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKH-QGKLFTCS 120
Query: 305 I--CSKTFCQSVHLKQHMR--------THTNVAPFQCGI--CEKRYKQSSHLNYHLKNH 351
+ C + F ++++H++ T +N F C C K +K +S + H ++H
Sbjct: 121 MDGCGRKFSIKANMQRHVKEIHEDETATKSN-RQFVCKEEGCNKVFKYASKMKKHEESH 178
Score = 44.4 bits (100), Expect = 2e-04
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 301 YRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLKNH 351
+ C C +F + HLKQHM++H++ F C + C Y + HLN H+ H
Sbjct: 60 HTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKH 112
Score = 39.5 bits (88), Expect = 0.005
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 16/160 (10%)
Query: 213 QFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTG--D 270
QF E C + F ++ H HVKL E C + ++ +R H
Sbjct: 153 QFVCKEEGCNKVFKYASKMKKHEE-SHVKLDYVEVVCCEPGCMKTFTNVECLRAHNQACH 211
Query: 271 RPYPCNYCPKSFTQKSGLDQHLRIHTKV---KPYRCVI--CSKTFCQSVHLKQHMR-THT 324
+ C+ C + +K+ + +HLR H +V + +C C +F +L +H++ +H
Sbjct: 212 QYVQCDICGEKHLKKN-IKRHLRAHEEVPSTERIKCSFEGCECSFSNKSNLTKHIKASHD 270
Query: 325 NVAPFQCGI--CEKRYKQSSHLNYHLKN----HNPANLTE 358
V PF C CEK + + H K+ + AN TE
Sbjct: 271 QVKPFACRFTGCEKVFPYKHVRDNHEKSSAHVYTQANFTE 310
Score = 28.7 bits (61), Expect = 9.0
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 173 CHQIFFSCCEYSLHHRDEHTKRRKGIRCQVCEKPMSVDAVQFPFNCETCGEGFHDENEYI 232
CHQ + C H ++ KR +R E+ S + ++ F E C F +++
Sbjct: 210 CHQ-YVQCDICGEKHLKKNIKRH--LRAH--EEVPSTERIKCSF--EGCECSFSNKSNLT 262
Query: 233 THTAIGHVKLKPFECNI--CHKRF 254
H H ++KPF C C K F
Sbjct: 263 KHIKASHDQVKPFACRFTGCEKVF 286
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 43.6 bits (98), Expect = 3e-04
Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 11/119 (9%)
Query: 241 KLKPFECNI--CHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKV 298
+ K F+C I C F + L H + C + F L +H IH
Sbjct: 536 RAKRFQCEIDYCRMTFKNRAELSVHKK-----NTCTVKSCGRHFRSHKYLRRHQSIHNDD 590
Query: 299 KPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLKNHNP 353
PY+C CS F S +H + H P++C C K YK S H + P
Sbjct: 591 MPYKCPWEGCSMAFKWSWDRGEHFQVHAGKRPYKCTTPGCSKIYKFVSDFTRHKRRCKP 649
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 37.1 bits (82), Expect = 0.026
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 218 CETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHM 264
C C F DE + H K K F+C++CHK+ + GG+ H+
Sbjct: 13 CYYCDREFDDEKILVQHQ-----KAKHFKCHVCHKKLSTAGGMAIHV 54
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 35.9 bits (79), Expect = 0.059
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 262 QHMRMHTGDRPYP--CNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH 319
+H M +P+ CN C KSF + L H+ H V S +H+
Sbjct: 105 KHPDMAPRGKPWKHCCNKCDKSFRSGNALGGHMSCHRSVGNQPKSTSSPPTVVDLHMPLL 164
Query: 320 MRTHTNVAPF----QCGICEKRYKQSSHLNYHLKNHNPANL---TEEQRAKYAELIGLIS 372
N+ QC +C K + S L H+ H + EE+ A E +G I+
Sbjct: 165 SSCDDNLLLLPPETQCQMCSKVFSTSGSLREHMMMHGGEKVVVKAEEEAAGLIEALG-IA 223
Query: 373 KEVVEVQIDSN 383
+ +V + S+
Sbjct: 224 DSMQDVMVFSS 234
Score = 34.7 bits (76), Expect = 0.14
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 243 KPFE--CNICHKRFTQQGGLMQHMRMH--TGDRPYPCNYCPKSFTQKSGLDQHLRIHTKV 298
KP++ CN C K F L HM H G++P + P L + +
Sbjct: 114 KPWKHCCNKCDKSFRSGNALGGHMSCHRSVGNQPKSTSSPPTVVDLHMPLLSSCDDNLLL 173
Query: 299 KP--YRCVICSKTFCQSVHLKQHMRTH 323
P +C +CSK F S L++HM H
Sbjct: 174 LPPETQCQMCSKVFSTSGSLREHMMMH 200
Score = 33.1 bits (72), Expect = 0.42
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 246 ECNICHKRFTQQGGLMQHMRMHTGDR 271
+C +C K F+ G L +HM MH G++
Sbjct: 179 QCQMCSKVFSTSGSLREHMMMHGGEK 204
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 35.9 bits (79), Expect = 0.059
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 246 ECNICHKRFTQQGGLMQHM-RMHTGD-----RPYPCNYCPKSFTQKSGLDQHL--RIHTK 297
+C IC + F+ GL H +H + R Y C C SFT + L++H+ + +
Sbjct: 464 KCKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERHVQEKHGAQ 523
Query: 298 VKPY----RCVICSKTFCQSVHLKQHM 320
Y RC+ C+ F + L QH+
Sbjct: 524 YLQYSTLLRCISCNSNFLNTDLLWQHI 550
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 35.5 bits (78), Expect = 0.078
Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 12/107 (11%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCV 304
F C IC+K F + L H R H P Q+SG + R++ +P CV
Sbjct: 48 FVCEICNKGFQRDQNLQLHRRGHN---------LPWKLRQRSGKEVRKRVYVCPEP-TCV 97
Query: 305 --ICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLK 349
S+ +K+H ++C C K+Y S H K
Sbjct: 98 HHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTK 144
Score = 29.9 bits (64), Expect = 3.9
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 11/108 (10%)
Query: 216 FNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPC 275
F CE C +GF + H GH N+ K Q+ G R++ P
Sbjct: 48 FVCEICNKGFQRDQNLQLHRR-GH--------NLPWK-LRQRSGKEVRKRVYVCPEPTCV 97
Query: 276 NYCP-KSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRT 322
++ P ++ +G+ +H K ++C CSK + K H +T
Sbjct: 98 HHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKT 145
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 34.3 bits (75), Expect = 0.18
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 260 LMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH 319
L H R G RPY C C K F + H + K+ + CV C F LK H
Sbjct: 266 LQTHYRRKHGARPYACRRCGKRFAVRGDWRTHEKNCGKL--WFCV-CGSDFKHKRSLKDH 322
Query: 320 MRT 322
+R+
Sbjct: 323 VRS 325
Score = 28.7 bits (61), Expect = 9.0
Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)
Query: 160 PSTCQQLTGGD----GLCHQIFFSCCEYSLH---HRDEHTKRRKGIRCQVCEKPMSVDAV 212
PS + L G +C++ F +H H ++ K + +R + + A
Sbjct: 176 PSAAEILVGSTQFSCAVCNKTFNRFNNMQMHMWGHGSQYRKGSESLRGAITVGGAAPPAS 235
Query: 213 QFPFNCETCGEGFHDENEYIT-------HTAIGHVKLK----PFECNICHKRFTQQGGLM 261
C C EG + E+ T H + K P+ C C KRF +G
Sbjct: 236 LMRLPCYCCAEGCRNNVEHPRARPLKDFRTLQTHYRRKHGARPYACRRCGKRFAVRGDWR 295
Query: 262 QHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLR 293
H + + G + + C C F K L H+R
Sbjct: 296 THEK-NCG-KLWFC-VCGSDFKHKRSLKDHVR 324
>05_03_0281 +
11560402-11560569,11561373-11561579,11562966-11563174,
11563261-11563309,11563611-11563673,11563799-11565472
Length = 789
Score = 33.9 bits (74), Expect = 0.24
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 158 LQPSTCQQLTGGDGLCHQIFFSCCEYSLHHRDEHTKRRKGIRCQVCEKPMSVDAVQFPFN 217
L S C + G Q+F CE L+ R + + K +V +
Sbjct: 108 LSCSVCDKAEDQAGQAAQVFI--CEQKLYTRTQLNQHVKTGDSEVDGSEVERSGFAGHPM 165
Query: 218 CETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQ 257
CE C F+ +NE TH + H + C+IC ++ Q
Sbjct: 166 CEFCRSSFYGDNELYTHMSREH-----YSCHICQRQHPGQ 200
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 33.1 bits (72), Expect = 0.42
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 12/107 (11%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCV 304
F C +C+K F ++ L H R H P QK+ + R++ +P CV
Sbjct: 48 FVCEVCNKGFQREQNLQLHRRGHN---------LPWKLKQKNPKEARRRVYLCPEP-SCV 97
Query: 305 --ICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLK 349
S+ +K+H ++C C KRY S H K
Sbjct: 98 HHDPSRALGDLTGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSK 144
Score = 29.1 bits (62), Expect = 6.8
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 11/108 (10%)
Query: 216 FNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPC 275
F CE C +GF E H GH N+ K Q+ R++ P
Sbjct: 48 FVCEVCNKGFQREQNLQLHRR-GH--------NLPWK-LKQKNPKEARRRVYLCPEPSCV 97
Query: 276 NYCP-KSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRT 322
++ P ++ +G+ +H K +RC CSK + K H +T
Sbjct: 98 HHDPSRALGDLTGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSKT 145
>07_03_1094 +
23919878-23920520,23921297-23921363,23921364-23921453,
23922220-23922284,23922372-23922470,23922851-23922992,
23923100-23923139
Length = 381
Score = 33.1 bits (72), Expect = 0.42
Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 6/100 (6%)
Query: 224 GFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFT 283
G DE E + A +EC++C K + L H H P P
Sbjct: 66 GVRDEAEVVGVAAATAKPQHGYECSVCGKVYGSYQALGGHKTSHRKP-PSPAAEPAAGEE 124
Query: 284 QKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTH 323
SG + + K +RC IC +TF L H R H
Sbjct: 125 PSSG-----GVAGEAKVHRCSICLRTFPSGQALGGHKRLH 159
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 33.1 bits (72), Expect = 0.42
Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 13/108 (12%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLD-QHLRIHTKVKPYRC 303
F C +C+K F ++ L H R H P QK+ L Q R++ +P C
Sbjct: 95 FVCEVCNKGFQREQNLQLHRRGHN---------LPWKLKQKNPLQAQRRRVYLCPEP-TC 144
Query: 304 V--ICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLK 349
V S+ +K+H ++C C KRY S H K
Sbjct: 145 VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSK 192
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 32.7 bits (71), Expect = 0.55
Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 14/108 (12%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYR-C 303
F C IC K F + L H R H P Q+SG + R++ V P + C
Sbjct: 25 FVCEICGKGFQRDQNLQLHRRGHN---------LPWKLRQRSGKEPRKRVY--VCPEKSC 73
Query: 304 V--ICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLK 349
V S+ +K+H ++C C KRY S H K
Sbjct: 74 VHHNPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSK 121
Score = 29.5 bits (63), Expect = 5.1
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 11/108 (10%)
Query: 216 FNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPC 275
F CE CG+GF + H GH N+ K Q+ G R++
Sbjct: 25 FVCEICGKGFQRDQNLQLHRR-GH--------NLPWK-LRQRSGKEPRKRVYVCPEKSCV 74
Query: 276 NYCP-KSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRT 322
++ P ++ +G+ +H K ++C CSK + K H +T
Sbjct: 75 HHNPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT 122
>02_04_0539 - 23745936-23746097,23746661-23747566
Length = 355
Score = 32.3 bits (70), Expect = 0.73
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 277 YCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEK 336
+CP+ F + L +H + +R V C C + H+ H +V PF+ CE+
Sbjct: 167 HCPERFDTQDKLAEHRNLCR----FRIVNCKNDGCLASFSANHIEKHDSVCPFKVLPCEQ 222
Query: 337 RYKQ 340
+Q
Sbjct: 223 LCEQ 226
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 31.9 bits (69), Expect = 0.96
Identities = 29/125 (23%), Positives = 44/125 (35%), Gaps = 3/125 (2%)
Query: 228 ENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSG 287
E E I + V F C +C+K F + L H R H S +
Sbjct: 22 EAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRAAAVSAVTTAA 81
Query: 288 LDQHLRIHTKVKPYRCV--ICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLN 345
R++ +P CV ++ +K+H ++C C KRY S
Sbjct: 82 PAPRKRVYVCPEP-TCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWK 140
Query: 346 YHLKN 350
H+KN
Sbjct: 141 AHVKN 145
>07_03_1165 - 24459156-24460139
Length = 327
Score = 31.9 bits (69), Expect = 0.96
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Query: 273 YPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTH---TNVAPF 329
+PC+ C K F + + H+R+H + VH + + T + P+
Sbjct: 113 FPCHLCNKEFGSRKAVHGHMRVHHAENEKEPMSLPPQVAAPVHPQARLPTRGASRSGGPY 172
Query: 330 QCGI--CEKRYKQSSHLNYHLKNH 351
+C C Y+ L H+ H
Sbjct: 173 KCKYEGCIMEYESHQGLGGHVAGH 196
>03_02_0404 -
8165211-8165318,8165397-8165733,8166031-8166242,
8166419-8166526,8166676-8166783,8166884-8166993,
8167122-8167228,8167349-8167566,8167674-8167841,
8168033-8168151,8168438-8168525,8168655-8168849,
8168968-8169271,8169363-8169480,8170034-8170133,
8170283-8170468
Length = 861
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 37 GFVSQIALTNHARMEHIDSYATGDPSIWTETKIFINNEKPIPNG 80
G + ALT ME I++ A +W T I + ++P NG
Sbjct: 468 GITKENALTKPGLMEQINTTADASDFLWYSTSIVVKGDEPYLNG 511
>07_03_1575 - 27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 200 CQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNIC 250
C++C+K S +++ CE CG+ FH + IT + + L F+C+ C
Sbjct: 1341 CRLCQKCYSGESIYIA--CEDCGDWFHGDIYSITLENVNN--LIGFKCHRC 1387
>03_05_0255 + 22435027-22435072,22436022-22437085
Length = 369
Score = 31.1 bits (67), Expect = 1.7
Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 10/109 (9%)
Query: 247 CNICHKRFTQQGGLMQHMRMHTGDR----PYPCNYCPKSFTQKSGLDQHLRIHTKVKPYR 302
C +C+K F L HM +H+ R P P T SG R + +P
Sbjct: 26 CKLCNKSFPSYCSLGGHMNLHSTRRRKKKPPPSPRKAPPITGASGSRYDFRERCRQRP-- 83
Query: 303 CVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKNH 351
+ ++ Q H T +C +C K + L+ H+K H
Sbjct: 84 --VAPQS--QPDHASSDDEPWTLAPKAECQLCFKAFHSCDALSMHMKAH 128
Score = 28.7 bits (61), Expect = 9.0
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 330 QCGICEKRYKQSSHLNYHLKNHN-PANLTEEQRAKYAELIGLISKEVVEVQIDSNEQILP 388
+C +C K S L H+K+H+ PA+ K + + K+++EVQ + +E LP
Sbjct: 278 ECRLCGKVLASGSALGGHMKSHSVPAHKKVATFPKTS--VTPSRKQLLEVQNELHELNLP 335
Query: 389 ----YDNSNMVTDEQFVQTWAEQNCQS 411
D S+ T+ + W + QS
Sbjct: 336 ALSNRDCSSTRTESELNPWWVASSIQS 362
>03_04_0188 - 18241815-18242477
Length = 220
Score = 31.1 bits (67), Expect = 1.7
Identities = 22/85 (25%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQK------SGLDQHLRIHTKV 298
F C +C K F L H H +Y + Q+ S D
Sbjct: 73 FRCTVCGKAFASYQALGGHKSSHRKPPSPGDHYGAAAAAQQLASAGDSKEDSASSAAGST 132
Query: 299 KPYRCVICSKTFCQSVHLKQHMRTH 323
P+RC IC ++F L H R H
Sbjct: 133 GPHRCTICRRSFATGQALGGHKRCH 157
>12_01_0797 +
7300370-7300506,7300682-7300798,7301903-7302443,
7302885-7304042,7304133-7304291,7304397-7304504,
7305045-7305304,7305936-7306101,7307025-7307050,
7307318-7307402,7307486-7307695,7308815-7308872,
7308964-7309037,7309323-7309373,7309576-7309664,
7310027-7310104,7310164-7310269
Length = 1140
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 317 KQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKN-HNPANLTEEQRA 362
+QH + H ++ ++CG C+K ++ L+ H N HN NL + A
Sbjct: 949 EQH-KIHFDINEWRCGFCKKAFRAEKFLDQHFHNRHN--NLVDNSLA 992
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 289 DQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTN 325
+QH +IH + +RC C K F L QH N
Sbjct: 949 EQH-KIHFDINEWRCGFCKKAFRAEKFLDQHFHNRHN 984
>07_01_0404 +
3093851-3094051,3094622-3094948,3096685-3096798,
3096897-3097109,3097975-3098151,3098270-3100091,
3100107-3100927,3101070-3101390
Length = 1331
Score = 30.7 bits (66), Expect = 2.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 39 VSQIALTNHARMEHIDSYATGDPSIWTETKIFINNEKPIPN 79
+S + + +E +DS +TG+ I E + ++N+K PN
Sbjct: 640 ISNAIVAEESTVESVDSKSTGERDIEVEPALLMDNDKEAPN 680
>07_01_0400 +
3048607-3048807,3049378-3049704,3051441-3051554,
3051653-3051865,3052731-3052907,3053026-3054847,
3054863-3055683,3055826-3056146
Length = 1331
Score = 30.7 bits (66), Expect = 2.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 39 VSQIALTNHARMEHIDSYATGDPSIWTETKIFINNEKPIPN 79
+S + + +E +DS +TG+ I E + ++N+K PN
Sbjct: 640 ISNAIVAEESTVESVDSKSTGERDIEVEPALLMDNDKEAPN 680
>07_01_0396 +
3016900-3017175,3017926-3018039,3018138-3018350,
3019216-3019392,3019511-3021332,3021348-3022168,
3022311-3022631
Length = 1247
Score = 30.7 bits (66), Expect = 2.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 39 VSQIALTNHARMEHIDSYATGDPSIWTETKIFINNEKPIPN 79
+S + + +E +DS +TG+ I E + ++N+K PN
Sbjct: 556 ISNAIVAEESTVESVDSKSTGERDIEVEPALLMDNDKEAPN 596
>02_04_0316 - 21978330-21979397
Length = 355
Score = 30.7 bits (66), Expect = 2.2
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 206 PMSVDAVQFPFNCETCGEGFHDENEYITHTAIG-HVKLKPFECNICHKRFTQQGGLMQHM 264
P+ V Q P G+G +D E + HV C+IC K F + L HM
Sbjct: 108 PVVVSVPQEPPQEAAKGDGDYDVVELDASELLAEHVHF----CDICGKGFRRDANLRMHM 163
Query: 265 RMHTGDR 271
R H GDR
Sbjct: 164 RAH-GDR 169
>02_01_0007 - 48497-48880
Length = 127
Score = 30.7 bits (66), Expect = 2.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 271 RPYPCNYCPKSFTQKSGLDQHLRIHTK 297
R YPC +C + F L H+ +H +
Sbjct: 27 RSYPCGFCRREFRSAQALGGHMNVHRR 53
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 243 KPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLR 293
KPF C C K F +G H + + G R + C C F K L+ H+R
Sbjct: 288 KPFRCRRCAKPFAVKGDWRTHEK-NCGKRWF-C-ACGSDFKHKRSLNDHVR 335
Score = 29.9 bits (64), Expect = 3.9
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 288 LDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTH-TNVAPFQCGICEKRYKQSSHLNY 346
L H + KP+RC C+K F +K RTH N C +K LN
Sbjct: 277 LQTHYKRKHGAKPFRCRRCAKPFA----VKGDWRTHEKNCGKRWFCACGSDFKHKRSLND 332
Query: 347 HLKNHNPANLTEEQRAKYA 365
H+++ +L + A A
Sbjct: 333 HVRSFGAHHLPVAESAAAA 351
>01_06_1284 + 35994595-35995074
Length = 159
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/79 (25%), Positives = 26/79 (32%), Gaps = 7/79 (8%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCV 304
FEC C KRF L H HT K + + + + + C
Sbjct: 35 FECKTCSKRFPSFQALGGHRTSHT-------RLQAKLLSDPAAAAAAAAERDRARVHECA 87
Query: 305 ICSKTFCQSVHLKQHMRTH 323
+C F L HMR H
Sbjct: 88 VCGVEFSMGQALGGHMRRH 106
>10_08_0460 -
18098187-18098248,18098331-18098399,18098468-18099434,
18100089-18100808,18100942-18101031,18101076-18101138,
18101223-18101366,18101471-18101527,18101606-18101680,
18101757-18101836,18101937-18102050,18102166-18102258,
18102470-18102553,18102812-18102859,18105207-18105337,
18105903-18106135
Length = 1009
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 42 IALTNHARMEHIDSYATGDPSIWTETKIFINNEKPIPNGKMKIDEDLVKIKTEEVISS 99
+ L MEHI GD S KI + +EK K + +E KIK+EE I +
Sbjct: 59 LGLDKSVGMEHITWSDDGDESKVRSKKIDMESEKKKAKKKREEEEPKSKIKSEEKIKT 116
>09_06_0349 +
22457820-22457987,22458202-22458246,22458597-22458650,
22458742-22458846,22458932-22459138,22459217-22459302,
22459423-22460330,22460566-22460624
Length = 543
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 297 KVKPYRCVICSKTFCQSVHLKQHMRTH 323
K++ +C C + FC S++ ++H R H
Sbjct: 22 KLQLQKCTKCPREFCSSINYRRHTRVH 48
>07_03_0080 + 13193001-13193312
Length = 103
Score = 30.3 bits (65), Expect = 2.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 273 YPCNYCPKSFTQKSGLDQHLRIHTK 297
Y C +C + FT L H+ IH K
Sbjct: 17 YECTFCKRGFTNAQALGGHMNIHRK 41
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDR 271
+EC C + FT L HM +H DR
Sbjct: 17 YECTFCKRGFTNAQALGGHMNIHRKDR 43
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 243 KPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLR 293
KPF C C K F +G H + + G R + C C F K L+ H+R
Sbjct: 296 KPFACRRCAKPFAVKGDWRTHEK-NCGKRWF-C-ACGSDFKHKRSLNDHVR 343
>02_05_1255 - 35279751-35280338
Length = 195
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 271 RPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQ 330
+PY C +C + F L H+ +H K + R S + + ++ + T V F+
Sbjct: 45 QPYNCTFCRRGFPTAQALGGHMNVHRKDRVGRATPSSSSSTTAAAARRSVSYDTLVRLFR 104
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/60 (25%), Positives = 24/60 (40%)
Query: 243 KPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYR 302
+P+ C C + F L HM +H DR S T + + + T V+ +R
Sbjct: 45 QPYNCTFCRRGFPTAQALGGHMNVHRKDRVGRATPSSSSSTTAAAARRSVSYDTLVRLFR 104
>01_06_1614 - 38648495-38649706
Length = 403
Score = 30.3 bits (65), Expect = 2.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDR 271
F C++C K F + + HMR+H D+
Sbjct: 105 FPCHVCSKEFGSRKAVHGHMRVHQADK 131
Score = 29.1 bits (62), Expect = 6.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 273 YPCNYCPKSFTQKSGLDQHLRIH 295
+PC+ C K F + + H+R+H
Sbjct: 105 FPCHVCSKEFGSRKAVHGHMRVH 127
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 259 GLMQHMRM-HTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLK 317
G+ +H R H+G R + C C K++ S HL+ + + C C + F +
Sbjct: 129 GIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKT-CGTRGHSC-DCGRVFSRVESFI 186
Query: 318 QHMRT 322
+H T
Sbjct: 187 EHQDT 191
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 259 GLMQHMRM-HTGDRPYPCNYCPKSFTQKSGLDQHLR 293
G+ +H R H+G R + C+ C K++ S HL+
Sbjct: 128 GIKKHFRRKHSGHRQWACSRCSKAYAVHSDYKAHLK 163
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 29.9 bits (64), Expect = 3.9
Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 9/108 (8%)
Query: 216 FNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPC 275
F CE CG+GF + H GH P+ R G R++ P
Sbjct: 59 FVCEVCGKGFQRDQNLQLHRR-GH--NLPWRL-----RQRGPGAAPPRRRVYVCPEPGCV 110
Query: 276 NYCP-KSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRT 322
++ P ++ +G+ +H K + C C K + LK H +T
Sbjct: 111 HHNPTRALGDLTGIKKHFCRKHGEKRWTCQRCGKRYAVQADLKAHTKT 158
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 29.9 bits (64), Expect = 3.9
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 13/108 (12%)
Query: 245 FECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLD-QHLRIHTKVKPYRC 303
F C +C+K F ++ L H R H P QK+ Q R++ +P C
Sbjct: 43 FVCEVCNKGFQREQNLQLHRRGHN---------LPWKLKQKNPAQAQRRRVYLCPEP-TC 92
Query: 304 V--ICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLK 349
V ++ +K+H ++C C KRY S H K
Sbjct: 93 VHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSK 140
Score = 29.5 bits (63), Expect = 5.1
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 10/107 (9%)
Query: 216 FNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPC 275
F CE C +GF E H GH N+ K + Q R++ P
Sbjct: 43 FVCEVCNKGFQREQNLQLHRR-GH--------NLPWKLKQKNPAQAQRRRVYLCPEPTCV 93
Query: 276 NYCP-KSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMR 321
++ P ++ +G+ +H K ++C CSK + K H +
Sbjct: 94 HHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSK 140
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 243 KPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQH 291
K ++C+ C KR+ Q H ++ G R Y C+ C F+++ H
Sbjct: 118 KKWKCDKCSKRYAVQSDWKAHSKI-CGTREYRCD-CGTLFSRRDSFITH 164
>03_01_0068 -
546475-546615,546709-546819,547449-547482,547582-547673,
547904-548062,548178-548251,548477-548551,548820-548903,
548981-549110
Length = 299
Score = 29.9 bits (64), Expect = 3.9
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 39 VSQIALTNHARMEHIDSYATGDPSIWTETKIFINNEKPIPNGKMKIDEDLVKIKTEEVIS 98
+ +++L ++A EH + G W + +I EK GK EDL K K E +
Sbjct: 203 LKRLSLCSYATYEHEAAELAG----WEDEQIEFIREKVSEEGKR---EDLKKGKAPEQVV 255
Query: 99 SLEPTNIMDLASKD 112
E +MDLAS D
Sbjct: 256 LDEAAFLMDLASVD 269
>12_01_0454 + 3580332-3581714
Length = 460
Score = 29.5 bits (63), Expect = 5.1
Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 13/97 (13%)
Query: 247 CNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVIC 306
C IC K F + L HMR H GD K G +Q +P R C
Sbjct: 226 CGICGKGFKRDANLRMHMRGH-GDEYKSAAALAKPPPPPEGEEQ------PPQPERRYSC 278
Query: 307 SKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSH 343
C + R H + P + +C K + + SH
Sbjct: 279 PHAGC------KRNRMHASFQPLKTILCVKNHYKRSH 309
Score = 29.5 bits (63), Expect = 5.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 331 CGICEKRYKQSSHLNYHLKNH 351
CGIC K +K+ ++L H++ H
Sbjct: 226 CGICGKGFKRDANLRMHMRGH 246
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 29.5 bits (63), Expect = 5.1
Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 11/97 (11%)
Query: 247 CNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVIC 306
C +C K F + L HMR H GD + K+ L ++ K
Sbjct: 260 CQVCGKGFKRDANLRMHMRAH-GD----------EYKSKAALSNPTKLLAKGGDETMAAA 308
Query: 307 SKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSH 343
++ + + R H P + IC K + + SH
Sbjct: 309 ARKYSCPQEGCRWNRRHAKFQPLKSVICAKNHYKRSH 345
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 215 PFNCETCGEGFHDENEYITHTAIGHVKLKP--FECNICHKRFTQQGGLMQHMRMH 267
P C + G G + +Y T + + P F C +C+K F + + HM H
Sbjct: 197 PLGCASIGIGKLTKGQYWIPTP-SQILIGPTQFSCPVCYKTFNRYNNMQMHMWGH 250
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 242 LKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLR 293
+KPF C C K F +G H + + G Y C C F K L H+R
Sbjct: 309 IKPFMCRKCGKAFAVRGDWRTHEK-NCGKLWY-C-ACGSDFKHKRSLKDHIR 357
Score = 28.7 bits (61), Expect = 9.0
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 260 LMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH 319
L H + G +P+ C C K+F + H + K+ + C C F LK H
Sbjct: 299 LQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKL--WYCA-CGSDFKHKRSLKDH 355
Query: 320 MR 321
+R
Sbjct: 356 IR 357
>05_01_0374 + 2924611-2924994
Length = 127
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 269 GDRPYPCNYCPKSFTQKSGLDQHLRIHTK 297
G R +PC +C K F + L H H K
Sbjct: 10 GRRLFPCLFCEKKFVKSQALGGHQNAHRK 38
>02_05_0201 + 26687369-26689228
Length = 619
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 241 KLKPFECNICHKRFTQQGGLMQHMRMH 267
K K EC+ICH+ FT L H R H
Sbjct: 428 KGKVHECSICHRVFTSGQALGGHKRCH 454
>01_01_1052 + 8297105-8297422,8298978-8299310,8299820-8301010
Length = 613
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Query: 218 CETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMR-MHTGD 270
CE C F+ +NE TH H F C+IC + + L +R H D
Sbjct: 147 CEFCKSPFYGDNELYTHMTREH-----FSCHICQRYSARLQSLSYLVRQQHNAD 195
>11_01_0357 +
2715271-2715509,2716200-2716281,2717117-2717251,
2717428-2717457,2717486-2717661,2717743-2717894,
2718395-2719083
Length = 500
Score = 29.1 bits (62), Expect = 6.8
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 276 NYCPKSF-TQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGIC 334
+Y KS+ T L L++ V C + F + H K RT V F G
Sbjct: 61 SYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHAKNDRRTIATVCMFLAGKV 120
Query: 335 E---KRYKQSSHLNYHLKNHNPANLTEEQRAKYAELIGLISKEVVEVQ 379
E + K ++Y + + A + + K + G+ +EV E Q
Sbjct: 121 EETPRPLKDVILISYEIIHKKDAAAVQRIKQKSLDYFGVEWQEVYEQQ 168
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 260 LMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH 319
L H + G +P+ C C K+F K H + K+ + C +C F LK H
Sbjct: 344 LQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKL--WYC-LCGSEFKHKRSLKDH 400
Query: 320 MR 321
R
Sbjct: 401 AR 402
Score = 29.1 bits (62), Expect = 6.8
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 242 LKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLR 293
LKPF C C K F +G H + + G Y C C F K L H R
Sbjct: 354 LKPFLCRKCGKAFAVKGDWRTHEK-NCGKLWY-C-LCGSEFKHKRSLKDHAR 402
>09_01_0106 + 1673737-1674522,1674625-1675089
Length = 416
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 244 PFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSF 282
P+EC C F+ L HM+ H D + P +F
Sbjct: 308 PYECRKCGTMFSSGQALGWHMKSHNSDERWGDKRVPSAF 346
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 260 LMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH 319
L H + G +P+ C C K+F K H + K+ + C +C F LK H
Sbjct: 339 LQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKL--WYC-LCGSEFKHKRSLKDH 395
Query: 320 MR 321
R
Sbjct: 396 AR 397
Score = 29.1 bits (62), Expect = 6.8
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 242 LKPFECNICHKRFTQQGGLMQHMRMHTGDRPYPCNYCPKSFTQKSGLDQHLR 293
LKPF C C K F +G H + + G Y C C F K L H R
Sbjct: 349 LKPFLCRKCGKAFAVKGDWRTHEK-NCGKLWY-C-LCGSEFKHKRSLKDHAR 397
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 29.1 bits (62), Expect = 6.8
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 29 VNCRLCGKGFVSQIALTNHARMEH 52
++C+ C K F S++AL +H++ +H
Sbjct: 170 ISCKSCSKTFNSEMALQSHSKAKH 193
>03_06_0607 + 35037467-35038624
Length = 385
Score = 29.1 bits (62), Expect = 6.8
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 331 CGICEKRYKQSSHLNYHLKNH 351
CG+C K +K+ ++L H++ H
Sbjct: 166 CGVCGKGFKRDANLRMHMRGH 186
>03_01_0343 - 2699518-2700114
Length = 198
Score = 29.1 bits (62), Expect = 6.8
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 256 QQGGLMQHMRMHTGDRPY-PCNYCPKSFTQKSGLDQHLRIHTK 297
QQ + T RPY C +C + FT L H+ IH +
Sbjct: 10 QQEAVASPTAAPTAARPYYGCVFCKRGFTTAQALGGHMNIHRR 52
>05_05_0036 -
21758409-21758531,21758891-21759206,21759964-21761121,
21761236-21761333
Length = 564
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 377 EVQIDSNEQILPYDNSNMVTDEQFVQT 403
E ID +++ L YD+S+M+ DE+ V++
Sbjct: 467 ESPIDEDDEDLSYDDSDMMVDEEMVRS 493
>03_04_0187 - 18236041-18236643
Length = 200
Score = 28.7 bits (61), Expect = 9.0
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
Query: 241 KLKPFECNICHKRFTQQGGLMQHMRMH----TGDRP-YPCNYCPKSFTQKSGLDQHLRIH 295
+L F C++C K F L H H T P + + P + +
Sbjct: 44 ELLRFRCSVCGKAFPSHQALGGHKASHRKPPTAALPMHVIDAPPPPSAEDTASSSTTTTT 103
Query: 296 TKVKPYRCVICSKTFCQSVHLKQHMRTH 323
+ +RC +C +TF L H R H
Sbjct: 104 SGGGRHRCSVCHRTFATGQALGGHKRCH 131
>01_06_1495 + 37769982-37771496
Length = 504
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 303 CVICSKTFCQSVHLKQHMRTH 323
C+IC K F + +L+ HMR H
Sbjct: 266 CLICGKGFKRDANLRMHMRGH 286
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.134 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,463,972
Number of Sequences: 37544
Number of extensions: 529249
Number of successful extensions: 1665
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1358
Number of HSP's gapped (non-prelim): 277
length of query: 411
length of database: 14,793,348
effective HSP length: 84
effective length of query: 327
effective length of database: 11,639,652
effective search space: 3806166204
effective search space used: 3806166204
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -