Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001737-TA|BGIBMGA001737-PA|undefined
(180 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g64910.1 68418.m08165 expressed protein ; expression support... 34 0.064
At5g36740.1 68418.m04402 PHD finger family protein 34 0.064
At5g36670.1 68418.m04388 PHD finger family protein 34 0.064
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 34 0.064
At5g58930.1 68418.m07382 expressed protein contains Pfam PF05340... 32 0.26
At5g42490.1 68418.m05172 kinesin motor family protein contains P... 31 0.34
At3g44750.1 68416.m04817 histone deacetylase, putative (HD2A) co... 31 0.34
At1g17690.1 68414.m02190 expressed protein 31 0.34
At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to vil... 31 0.59
At5g56360.1 68418.m07034 calmodulin-binding protein similar to a... 30 0.78
At4g05520.2 68417.m00839 calcium-binding EF hand family protein ... 30 0.78
At3g12590.1 68416.m01568 expressed protein 30 1.0
At5g55430.1 68418.m06905 hypothetical protein 29 1.4
At3g47500.1 68416.m05166 Dof-type zinc finger domain-containing ... 29 1.4
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 29 1.4
At2g39260.1 68415.m04821 MIF4G domain-containing protein similar... 29 1.4
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 29 1.4
At4g26380.1 68417.m03795 DC1 domain-containing protein contains ... 29 1.8
At1g55050.1 68414.m06288 expressed protein ; expression supporte... 29 1.8
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 1.8
At1g09730.1 68414.m01092 Ulp1 protease family protein low simila... 29 1.8
At5g63320.1 68418.m07946 expressed protein 29 2.4
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 29 2.4
At2g46710.1 68415.m05828 rac GTPase activating protein, putative... 29 2.4
At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyo... 29 2.4
At3g10660.1 68416.m01282 calcium-dependent protein kinase isofor... 28 3.2
At1g48520.3 68414.m05424 glutamyl-tRNA(Gln) amidotransferase B f... 28 3.2
At1g48520.2 68414.m05423 glutamyl-tRNA(Gln) amidotransferase B f... 28 3.2
At1g48520.1 68414.m05425 glutamyl-tRNA(Gln) amidotransferase B f... 28 3.2
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 28 4.2
At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical... 28 4.2
At5g02810.1 68418.m00223 pseudo-response regulator 7 (APRR7) ide... 28 4.2
At3g14000.2 68416.m01768 expressed protein 28 4.2
At3g14000.1 68416.m01767 expressed protein 28 4.2
At2g27200.1 68415.m03269 GTP-binding family protein contains Pfa... 28 4.2
At2g13690.1 68415.m01510 PRLI-interacting factor, putative simil... 28 4.2
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 28 4.2
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 5.5
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 5.5
At5g23890.1 68418.m02806 expressed protein weak similarity to SP... 27 5.5
At3g59420.1 68416.m06627 receptor protein kinase, putative (ACR4... 27 5.5
At3g24340.1 68416.m03056 SNF2 domain-containing protein / helica... 27 5.5
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 27 5.5
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 27 5.5
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 27 7.3
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 27 7.3
At5g14240.1 68418.m01664 expressed protein 27 7.3
At5g05965.1 68418.m00660 hypothetical protein 27 7.3
At5g03450.1 68418.m00300 zinc finger (C3HC4-type RING finger) fa... 27 7.3
At4g29940.1 68417.m04259 pathogenesis-related homeodomain protei... 27 7.3
At4g13540.1 68417.m02111 expressed protein 27 7.3
At4g12610.1 68417.m01987 transcription initiation factor IIF alp... 27 7.3
At4g05520.1 68417.m00838 calcium-binding EF hand family protein ... 27 7.3
At3g49390.1 68416.m05399 RNA-binding protein, putative RNA-bindi... 27 7.3
At2g47620.1 68415.m05941 SWIRM domain-containing protein / DNA-b... 27 7.3
At2g38440.1 68415.m04721 expressed protein 27 7.3
At2g14910.2 68415.m01696 expressed protein 27 7.3
At2g14910.1 68415.m01695 expressed protein 27 7.3
At2g14140.1 68415.m01575 hypothetical protein similar to At2g049... 27 7.3
At2g03500.1 68415.m00309 myb family transcription factor contain... 27 7.3
At1g47900.1 68414.m05334 expressed protein 27 7.3
At1g11400.2 68414.m01310 expressed protein 27 7.3
At1g11400.1 68414.m01309 expressed protein 27 7.3
At1g08520.1 68414.m00943 magnesium-chelatase subunit chlD, chlor... 27 7.3
At5g52310.1 68418.m06492 low-temperature-responsive protein 78 (... 27 9.6
At2g40020.1 68415.m04918 expressed protein 27 9.6
At1g12260.1 68414.m01418 no apical meristem (NAM) family protein... 27 9.6
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 27 9.6
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 33.9 bits (74), Expect = 0.064
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 99 DMQTTNETE-TEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEKKQNGAAE 150
+ Q T ETE TED++E P P+ G E A + AK++ ++ G E
Sbjct: 42 ETQPTQETEETEDKVESPAPEEEGKNEEEANENQEEEAAKVESKAAEEGGNEE 94
>At5g36740.1 68418.m04402 PHD finger family protein
Length = 1179
Score = 33.9 bits (74), Expect = 0.064
Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Query: 15 IDVENDEPSASGFGAEYQWCGEWRVRATALQDADSRAATCVRRASNDQAL---VVDGD-E 70
+DVE ++P S A + C V + + T V ND+ ++DG E
Sbjct: 986 VDVEENKPEESKDSAHERNCATAGVESPSNPVDSCLKLTYVEEGDNDRESNLKLLDGSVE 1045
Query: 71 DTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETR 130
+ E PD+ ++ DQ+D + + ED+ C G E + E+
Sbjct: 1046 EKEDTKKLTDIDINSLPDEVDDSHADQSDTKEQEIDDKEDKTPLSDDGCEGKAEGTKESN 1105
Query: 131 IQALKAKIKDMEKKQNG 147
Q K+ + + NG
Sbjct: 1106 QQPDSNKVDNSQPLGNG 1122
>At5g36670.1 68418.m04388 PHD finger family protein
Length = 1193
Score = 33.9 bits (74), Expect = 0.064
Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Query: 15 IDVENDEPSASGFGAEYQWCGEWRVRATALQDADSRAATCVRRASNDQAL---VVDGD-E 70
+DVE ++P S A + C V + + T V ND+ ++DG E
Sbjct: 1000 VDVEENKPEESKDSAHERNCATAGVESPSNPVDSCLKLTYVEEGDNDRESNLKLLDGSVE 1059
Query: 71 DTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETR 130
+ E PD+ ++ DQ+D + + ED+ C G E + E+
Sbjct: 1060 EKEDTKKLTDIDINSLPDEVDDSHADQSDTKEQEIDDKEDKTPLSDDGCEGKAEGTKESN 1119
Query: 131 IQALKAKIKDMEKKQNG 147
Q K+ + + NG
Sbjct: 1120 QQPDSNKVDNSQPLGNG 1136
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 33.9 bits (74), Expect = 0.064
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 67 DGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEAS 126
DGD+D E P+ P +D + E+ +M N TE E+ EEP K L + S
Sbjct: 1161 DGDDDPE--EDPEEDPEEDPEEDPEEDPEECEEMDVAN-TEQEEPAEEPQKKEENLEKTS 1217
Query: 127 AETRIQALKAKIKDMEKKQNG 147
+A+ D K++ G
Sbjct: 1218 GTVADPITEAE-TDNRKEERG 1237
>At5g58930.1 68418.m07382 expressed protein contains Pfam PF05340:
Protein of unknown function (DUF740)
Length = 521
Score = 31.9 bits (69), Expect = 0.26
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 38 RVRATALQDADSRAATCVRRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQ 97
RVR+ +++DA + RR S D D D+D EL P I PD E+
Sbjct: 56 RVRSYSVRDASASVLDQPRRRSCDVRSNHDDDDDDELLKSSIRFP--IVPDLIEDEEEED 113
Query: 98 TDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKD 140
+ + E E ED E+ T K L++ E+R Q LK KD
Sbjct: 114 DEGKKLVEEEIEDG-EQKTMK--ELID--LESRNQQLKNNGKD 151
>At5g42490.1 68418.m05172 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1087
Score = 31.5 bits (68), Expect = 0.34
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Query: 44 LQDADSRAATCVRRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTT 103
+ + +A C+ + N Q+ ED EL P + S + E N+ + D T
Sbjct: 585 MSPSTKQAEQCLNKEENAQS-EQQSTEDCELNSLPINNQSEATVEVELTPNDAKLDEDAT 643
Query: 104 NETETEDRIEEPTPK-CN--------GLVEASAETRIQALKAKIKDMEKK 144
+ + E + ++ K CN G + +T + ALK K+K+M+KK
Sbjct: 644 SRDKWESKQQQEADKDCNESSVCKNIGTDDNDNDTYM-ALKEKVKEMQKK 692
>At3g44750.1 68416.m04817 histone deacetylase, putative (HD2A)
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA putative histone deacetylase (HD2A)
GI:11066134
Length = 245
Score = 31.5 bits (68), Expect = 0.34
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 78 PQYSPSRIAPDDEHQTNEDQTDMQTTNETETED-RIEEPTPK-----CNGLVEASAETRI 131
P+ P+ + P + + +E +D ++++ ED EEPTPK E + + +
Sbjct: 125 PKAKPAEVKPAVDDEEDESDSDGMDEDDSDGEDSEEEEPTPKKPASSKKRANETTPKAPV 184
Query: 132 QALKAKI-----KDMEKKQNGAA 149
A KAK+ K EKK+ G A
Sbjct: 185 SAKKAKVAVTPQKTDEKKKGGKA 207
>At1g17690.1 68414.m02190 expressed protein
Length = 754
Score = 31.5 bits (68), Expect = 0.34
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 45 QDADSRAATCVRRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTN 104
+D D + +D DG++D G Q + + DD + N++Q++ + +
Sbjct: 96 EDEDDEDEDEEENSGSDDLSSTDGEDDKS-QGDDQETLGGLT-DDTQEDNDNQSEEEDPD 153
Query: 105 ETETEDRIEEPTPKCNGLVEASA 127
+ ET++ + E + V+AS+
Sbjct: 154 DYETDEEVHELSTNGQSFVDASS 176
>At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to villin
3 (VLN3) [Arabidopsis thaliana] GI:3415117
Length = 965
Score = 30.7 bits (66), Expect = 0.59
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 69 DEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPK-CNGLVEASA 127
+E TE + SP+ A +E + +D ++++TT T T +R++ + K G+
Sbjct: 868 EEATEAKEEEEVSPAAEASAEEAKPKQDDSEVETTGVTFTYERLQAKSEKPVTGIDFKRR 927
Query: 128 ETRIQALKAKIKDMEKKQNGAAEVCWLESLKAKK 161
E + ++ K +K++ W + L KK
Sbjct: 928 EAYLSEVEFKTVFGMEKESFYKLPGWKQDLLKKK 961
>At5g56360.1 68418.m07034 calmodulin-binding protein similar to
alpha glucosidase II beta subunit from GI:2104691 [Mus
musculus]
Length = 647
Score = 30.3 bits (65), Expect = 0.78
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 45 QDADSRAATCVRRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTN 104
Q+ A D V DGDEDT G +YS P+D+ E + D ++
Sbjct: 382 QENHEHTPITAHEADEDDGFVSDGDEDTSDDG--KYSDHE--PEDDSYEEEYRHDSSSSY 437
Query: 105 ETETEDRIE 113
+++ +D ++
Sbjct: 438 KSDADDDVD 446
>At4g05520.2 68417.m00839 calcium-binding EF hand family protein
similar to EH-domain containing protein 1 from {Mus
musculus} SP|Q9WVK4, {Homo sapiens} SP|Q9H4M9,
receptor-mediated endocytosis 1 from [Caenorhabditis
elegans] GI:13487775, GI:13487777, GI:13487779; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 545
Score = 30.3 bits (65), Expect = 0.78
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 117 PKCNGLVEASAETRIQALKAKIKDMEKKQNGAAEVCWLESLKAKKICPQCNAITTAQHLR 176
P GL ++ ++ ++D K A+ W +S K PQ N +T L+
Sbjct: 107 PVLEGLENVVSKQKVSKTNVDVEDNVTKPQVTAKTPWFKSKSIIK--PQVNVVTIVDGLK 164
Query: 177 RIY 179
R+Y
Sbjct: 165 RLY 167
>At3g12590.1 68416.m01568 expressed protein
Length = 1162
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 103 TNETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEKKQNGAAEVCWLES-LKAKK 161
++E+E +++ CN L +A + ++AK+K K G AE+ +LE L+
Sbjct: 279 SSESERPVNLQDMN-NCNLLEVGAAGLLVGDMEAKMKGQHWKYFGTAEMPYLEQLLQPAS 337
Query: 162 ICPQCNAITTAQHLRRI 178
+ N+ + HLR I
Sbjct: 338 VTMITNSASARSHLRAI 354
>At5g55430.1 68418.m06905 hypothetical protein
Length = 149
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 80 YSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEE 114
YSP ++ DD+ + ED+ + + E E E+ EE
Sbjct: 7 YSPVPLSQDDDLEEEEDEKEEEEVEEEEEEEEEEE 41
>At3g47500.1 68416.m05166 Dof-type zinc finger domain-containing
protein identical to H-protein promoter binding
factor-2a GI:3386546 from [Arabidopsis thaliana]
Length = 448
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 61 DQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTN-ETETEDRIEEPT 116
+ A+ V+ DE+ + G SP ++ P+ + N + D N + ET D+ EE T
Sbjct: 24 ESAVTVEDDEEDDWSGGDDKSPEKVTPELSDKNNNNCNDNSFNNSKPETLDK-EEAT 79
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 78 PQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALKAK 137
P +SP DD+ ++D++ N E E P P + E + E R A K
Sbjct: 61 PSFSPKHDDDDDDIM----ESDVELDNSDVVEPDNEPPQPMGDPTAEVTDENRDDAQSEK 116
Query: 138 IKDMEKKQNG 147
K ME +G
Sbjct: 117 SKAMEAISDG 126
>At2g39260.1 68415.m04821 MIF4G domain-containing protein similar to
hUPF2 [Homo sapiens] GI:12232320; contains Pfam profile
PF02854: MIF4G domain
Length = 1186
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 89 DEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEKKQNGA 148
+ QT ED T++ + + +DR PK VE + K K KD EKK
Sbjct: 397 ENQQTTEDTTEV-SADSASMDDRSNAEQPKEKEEVEKEKAKDTKKEKGKEKDSEKKMEHE 455
Query: 149 AE 150
E
Sbjct: 456 KE 457
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 29.5 bits (63), Expect = 1.4
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 11/107 (10%)
Query: 2 DEDIPDTSSEEGSIDVENDEPSASGFGAEYQWCGEWRVRATALQDADSRAATCVRRASND 61
D+D+ D +EG D +DE + S G + T ++D + T + ND
Sbjct: 2119 DDDVDDDMDDEGEDDEGDDEDADS----VEDGAGVMSIAGTDVEDPED---TGLGDEYND 2171
Query: 62 QALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETET 108
+V + +ED + Y DDE + N+D D + ET
Sbjct: 2172 D-MVDEDEEDEDEYNDDMVDEDE---DDEDEYNDDMVDEDEDDFHET 2214
>At4g26380.1 68417.m03795 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 1016
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 63 ALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCN 120
AL++ DE++EL+ S + +++ N Q TT E E +D I T N
Sbjct: 117 ALIMAMDEESELFSLLSEVASLVQTEEQKLINNQQVPPLTTEEEEKDDLIYGYTDDMN 174
>At1g55050.1 68414.m06288 expressed protein ; expression supported
by MPSS
Length = 914
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/103 (18%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 35 GEWRVRATALQDADSRAATCVRRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTN 94
G + ++ Q D C+ + + + L E+ + PP+ + + +P +H T
Sbjct: 703 GAFHEHSSTEQQQDESNRLCLDKICSSKDLGTAQKEEQPIQLPPKSASDKNSPSRDHGTT 762
Query: 95 EDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETR-IQALKA 136
E++ ++ E E + + P+ + TR ++AL++
Sbjct: 763 EERASLE-QQEEEHKQQANTDIPRRQSTRKRPLTTRALEALES 804
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.1 bits (62), Expect = 1.8
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 45 QDADSRAATCVRRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTN 104
+D D +A+ + +S + G +D ++ + P + E + +
Sbjct: 182 KDKDKKASASLAISSVEAKEDRQGKKDVKIKVAEKKVPKHVREKQETLARWKEAEDGKKK 241
Query: 105 ETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEKKQNG 147
E E R EE + E AE Q K KI+ MEKKQ G
Sbjct: 242 EEEERLRKEEEERRIEEEREREAEEIRQ--KRKIRKMEKKQEG 282
>At1g09730.1 68414.m01092 Ulp1 protease family protein low
similarity to SP|Q9GZR1 SUMO-1-specific protease 1 (EC
3.4.22.-) (Sentrin-specific protease SENP6) (Protease
FKSG6) {Homo sapiens}; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 984
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 70 EDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETET 108
E+ E+ GP P+ D+HQ +D T + E+ T
Sbjct: 54 EEEEMEGPSCAEPATAVESDDHQCEDDSTLVTEAKESRT 92
>At5g63320.1 68418.m07946 expressed protein
Length = 569
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 88 DDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEKKQNG 147
+DE N+ + + Q N E E R+ E + G+V+ E + + ++ +++ E NG
Sbjct: 460 EDEKSINKIEGEEQLANVPEQESRVTEKEEQETGVVDL-GEQKSEVVEKGVEENEAVDNG 518
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 28.7 bits (61), Expect = 2.4
Identities = 23/146 (15%), Positives = 57/146 (39%), Gaps = 2/146 (1%)
Query: 2 DEDIPDTSSEEGSIDVENDEPSASGFGAEYQWCGEWRVRATALQDADSRAATCVRRASND 61
+ ++ +++ E + +DE +SG YQ +Q ++ + V+ + +
Sbjct: 261 ETNLSTSNATETTESSGSDESGSSGKSTGYQQTKNEEDEKEKVQSSEEESK--VKESGKN 318
Query: 62 QALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNG 121
+ ++++ P + + E + E + + + ++ E + EEP K
Sbjct: 319 EKDASSSQDESKEEKPERKKKEESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEKE 378
Query: 122 LVEASAETRIQALKAKIKDMEKKQNG 147
+ E I+ + K K+ Q G
Sbjct: 379 ASSSQEENEIKETEIKEKEESSSQEG 404
>At2g46710.1 68415.m05828 rac GTPase activating protein, putative
similar to rac GTPase activating protein 2 [Lotus
japonicus] GI:3695061; contains Pfam profiles PF00620:
RhoGAP domain, PF00786: P21-Rho-binding domain
Length = 455
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 70 EDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTP 117
+ T G P++ P+R PD + D + + + T + D + TP
Sbjct: 8 KSTGTIGFPEFKPTRPGPDKYENIHNDDDEYEEGHSTTSTDYYDASTP 55
>At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyosin
1 [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae};
similar to enterophilin-2L (GI:12718845) [Cavia
porcellus]; similar to latent nuclear antigen
(GI:5669894) [Human herpesvirus 8]; similar to multiple
ligand-binding protein 1 (GI:1403575) [Streptococcus
sp.]
Length = 326
Score = 28.7 bits (61), Expect = 2.4
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 73 ELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQ 132
EL+ P+ AP+ + + Q T+ E D + + K AS E +I
Sbjct: 106 ELHRKKSKKPNTPAPERDDIPGDGH---QETDVFEVLDEKAKESEKTKNDELASKEDQIN 162
Query: 133 ALKAKIKDMEKKQNGAAE 150
LKA++ D+EK++ +E
Sbjct: 163 VLKARLYDLEKERVSLSE 180
>At3g10660.1 68416.m01282 calcium-dependent protein kinase isoform 2
(CPK2) identical to calcium-dependent protein kinase
isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 646
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/62 (22%), Positives = 30/62 (48%)
Query: 82 PSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKDM 141
P P+ + ++ + T +TT+ET+ E + E PK V ++ L+ K ++
Sbjct: 123 PESAKPETKSESKPETTKPETTSETKPETKAEPQKPKHMRRVSSAGLRTESVLQRKTENF 182
Query: 142 EK 143
++
Sbjct: 183 KE 184
>At1g48520.3 68414.m05424 glutamyl-tRNA(Gln) amidotransferase B
family protein contains Pfam profiles: PF02934 PET112
family, N terminal region, PF02637 GatB/Yqey domain,
PF01162 PET112 family, C terminal region
Length = 488
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 56 RRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNE 95
RR SN+ ++ G + T + Q SP+R+AP + H++N+
Sbjct: 24 RRRSNNFSVRSCGSQTTTTHEAKQSSPTRVAPKN-HKSNQ 62
>At1g48520.2 68414.m05423 glutamyl-tRNA(Gln) amidotransferase B
family protein contains Pfam profiles: PF02934 PET112
family, N terminal region, PF02637 GatB/Yqey domain,
PF01162 PET112 family, C terminal region
Length = 475
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 56 RRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNE 95
RR SN+ ++ G + T + Q SP+R+AP + H++N+
Sbjct: 24 RRRSNNFSVRSCGSQTTTTHEAKQSSPTRVAPKN-HKSNQ 62
>At1g48520.1 68414.m05425 glutamyl-tRNA(Gln) amidotransferase B
family protein contains Pfam profiles: PF02934 PET112
family, N terminal region, PF02637 GatB/Yqey domain,
PF01162 PET112 family, C terminal region
Length = 550
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 56 RRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNE 95
RR SN+ ++ G + T + Q SP+R+AP + H++N+
Sbjct: 24 RRRSNNFSVRSCGSQTTTTHEAKQSSPTRVAPKN-HKSNQ 62
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 46 DADSRAATCVRRASNDQALVVDGDE-------DTELYGPPQYSPSRIAPDDEHQTNED 96
D S T V ++ N+ ++VDG+E E + PP PS+ PD E + ED
Sbjct: 179 DMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPP-LIPSKTIPDPEDKKPED 235
>At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical to
EIN2 [Arabidopsis thaliana] gi|5231113|gb|AAD41076;
member of the natural resistance-associated macrophage
protein (NRAMP) metal transporter family, PMID:11500563;
metal transport capacity has not been shown,
PMID:11500563, PMID:1038174
Length = 1294
Score = 27.9 bits (59), Expect = 4.2
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 61 DQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCN 120
DQ + E+ EL +YS S+++ E ++Q+ +Q+T E D+ K
Sbjct: 535 DQEIRSSPPEEREL--DVKYSTSQVSSLKEDSDVKEQSVLQSTVVNEVSDKDLIVETKMA 592
Query: 121 GLVEASAETRIQALKAKIKDMEKKQNGAAEVCWLESLKAKKICPQCN 167
+ S +I +++ K +EK G V W E+ +A K P N
Sbjct: 593 KIEPMSPVEKIVSMENNSKFIEKDVEG---VSW-ETEEATKAAPTSN 635
>At5g02810.1 68418.m00223 pseudo-response regulator 7 (APRR7)
identical to pseudo-response regulator 7 GI:10281004
from [Arabidopsis thaliana]
Length = 727
Score = 27.9 bits (59), Expect = 4.2
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 12/136 (8%)
Query: 10 SEEGSIDVENDEPSASGFGAEYQWCGEWRVRATALQDADSRAATCVRRASNDQALVVDGD 69
+E GSI + + S+ G GA+ W +A + D+ RA + R + A VV +
Sbjct: 237 NENGSIGLNASDGSSDGSGAQ----SSWTKKAVDVDDS-PRAVSLWDRVDSTCAQVVHSN 291
Query: 70 ED---TELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIE---EPTPKCNGLV 123
+ +L PP ++ DD+ + D++ + + +E EP K G++
Sbjct: 292 PEFPSNQLVAPPAEKETQ-EHDDKFEDVTMGRDLEISIRRNCDLALEPKDEPLSKTTGIM 350
Query: 124 EASAETRIQALKAKIK 139
+ K K+K
Sbjct: 351 RQDNSFEKSSSKWKMK 366
>At3g14000.2 68416.m01768 expressed protein
Length = 374
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 113 EEPTPKCNGLVEASAETRIQALKAKIKDMEKKQNGAAEVC 152
EE + + ++E +I++L ++IKDM K +GA + C
Sbjct: 22 EEDEEEEDRVIETPRSKQIKSLTSQIKDMAVKASGAYKSC 61
>At3g14000.1 68416.m01767 expressed protein
Length = 374
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 113 EEPTPKCNGLVEASAETRIQALKAKIKDMEKKQNGAAEVC 152
EE + + ++E +I++L ++IKDM K +GA + C
Sbjct: 22 EEDEEEEDRVIETPRSKQIKSLTSQIKDMAVKASGAYKSC 61
>At2g27200.1 68415.m03269 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 537
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 82 PSRIAPDDEHQTNEDQTDMQTTNETETEDRIEE 114
P I DDE++T +D +T ++TE + EE
Sbjct: 468 PPEITRDDENETADDTLGAETREGSQTEKKGEE 500
>At2g13690.1 68415.m01510 PRLI-interacting factor, putative similar
to PRLI-interacting factor G [Arabidopsis thaliana]
GI:11139264 (PMID:9765207); supporting cDNA
gi|26450291|dbj|AK117606.1|
Length = 544
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 81 SPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTP 117
SP R++P D T + +TT E E + + + TP
Sbjct: 83 SPGRVSPIDSDPTVTTMQETETTQEEEDDAVVVDSTP 119
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 52 ATCVRRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDR 111
AT N++ + +E TE Y Q P +E T + + + +TE+
Sbjct: 1833 ATTTTDGDNEETEAENAEEKTEEYVEAQQDNEADEPVEESPTETETIPTEEESRDQTEEE 1892
Query: 112 IEEP 115
+EP
Sbjct: 1893 NQEP 1896
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 56 RRASNDQALVVDGDEDTELY-GPPQYSPSRIAPDDEHQTNEDQTD 99
RR N ++ + D E Y P SPS + DDEH NED +
Sbjct: 55 RRRPNSNDADLESELDHERYLDLPSESPSP-SDDDEHDMNEDSAN 98
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 56 RRASNDQALVVDGDEDTELY-GPPQYSPSRIAPDDEHQTNEDQTD 99
RR N ++ + D E Y P SPS + DDEH NED +
Sbjct: 55 RRRPNSNDADLESELDHERYLDLPSESPSP-SDDDEHDMNEDSAN 98
>At5g23890.1 68418.m02806 expressed protein weak similarity to
SP|P12957 Caldesmon (CDM) {Gallus gallus}
Length = 946
Score = 27.5 bits (58), Expect = 5.5
Identities = 20/113 (17%), Positives = 48/113 (42%)
Query: 44 LQDADSRAATCVRRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTT 103
+Q +D ++ ++ A+++++ + D D+ E Q S D D T
Sbjct: 136 IQSSDEISSDEIKVANSEESNLKDEDKSIESNDVAQKSDEGSGEDKLLGKETSSFDGVMT 195
Query: 104 NETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEKKQNGAAEVCWLES 156
+E + + I + TP+ + +V A + + I + + + + E L++
Sbjct: 196 DEADATESIPQNTPEADLMVNAETDPETAESEKIISESKSLLDSSTEPILLDA 248
>At3g59420.1 68416.m06627 receptor protein kinase, putative (ACR4)
identical to putative receptor protein kinase ACR4
[Arabidopsis thaliana] GI:20302590; contains protein
kinase domain, Pfam:PF00069
Length = 895
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 2 DEDIPDTSSEEGSIDVENDEPSASGFGAEYQWCG 35
+E++ TS+EE +D+ EP + G ++ CG
Sbjct: 241 EEEVTGTSTEEKILDLPPKEPLLAVVGGKFYACG 274
>At3g24340.1 68416.m03056 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|P41410 DNA
repair protein rhp54 (RAD54 homolog)
{Schizosaccharomyces pombe}; contains PFam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1132
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 46 DADSRAATCVRRASNDQALVVDGDEDTELYGPPQYSPSRIAPDD 89
DAD R C +ASN +D D+D G Q + DD
Sbjct: 114 DADDRNLGCEEKASNFNP--IDDDDDVVFVGTVQRENDHVEDDD 155
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 95 EDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEKK 144
E+Q + + E E ++ + VE S T I+ L +IK +E+K
Sbjct: 445 EEQLEKLEAEKVELESEVKCNREEAVAQVENSLATEIEVLTCRIKQLEEK 494
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 95 EDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEKK 144
E+Q + + E E ++ + VE S T I+ L +IK +E+K
Sbjct: 411 EEQLEKLEAEKVELESEVKCNREEAVAQVENSLATEIEVLTCRIKQLEEK 460
>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 223
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 88 DDEHQTNEDQTDMQTTNETETEDRIEEPTPK 118
D E + D+ D E ++ED EE TPK
Sbjct: 88 DSEKGMDVDEDDSDDDEEEDSEDEEEEETPK 118
>At5g22650.1 68418.m02646 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 306
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 88 DDEHQTNEDQTDMQTTNETETEDRIEEPTPK 118
D E + D+ D E ++ED EE TPK
Sbjct: 171 DSEKGMDVDEDDSDDDEEEDSEDEEEEETPK 201
>At5g14240.1 68418.m01664 expressed protein
Length = 256
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 70 EDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAET 129
E + PP Y+P+ +DE +DQ E E ED ++ + +E +
Sbjct: 30 EKAPAFKPPAYTPA----EDESSAPKDQAWFDKKTEEELEDLEDDKDLDDDRFLEEYRKK 85
Query: 130 RIQALK--AKIK 139
R+ L+ AK+K
Sbjct: 86 RLSELREAAKVK 97
>At5g05965.1 68418.m00660 hypothetical protein
Length = 131
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 39 VRATALQDADSRAATCVRRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQT 98
V+ Q D R++ R +S + + G + + Y PP+ S +P + + D+T
Sbjct: 56 VQGNISQATDERSSHEKRESSYYSSSIYYGGQ--QHYSPPRTDGSSTSPSHQPKETNDRT 113
Query: 99 DMQTT 103
D+ T+
Sbjct: 114 DITTS 118
>At5g03450.1 68418.m00300 zinc finger (C3HC4-type RING finger)
family protein
Length = 630
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 153 WLESLKAKKICPQCNAITTAQHLRRIY 179
W + ++ CP CN I + + +R+IY
Sbjct: 152 WFQQRRSGGKCPLCNKICSLRDVRKIY 178
>At4g29940.1 68417.m04259 pathogenesis-related homeodomain protein
(PRHA) identical to Pathogenesis-related homeodomain
protein (PRHA) (SP:P48785) [Arabidopsis thaliana)
Length = 796
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 105 ETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEKKQN 146
E+ET+ RI + T K VE T + + K K++ K+N
Sbjct: 3 ESETKGRISQETDKACVSVERIGSTLLSSFVKKGKEVSNKRN 44
>At4g13540.1 68417.m02111 expressed protein
Length = 210
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 123 VEASAETRIQALKAKIKDMEKKQNG 147
V+A ET I+ LK +I MEK+QNG
Sbjct: 144 VKARGET-IETLKGRINLMEKQQNG 167
>At4g12610.1 68417.m01987 transcription initiation factor IIF alpha
subunit (TFIIF-alpha) family protein low similarity to
SP|Q05913 Transcription initiation factor IIF, alpha
subunit (TFIIF-alpha) (Transcription factor 5, large
chain) (TF5A) {Drosophila melanogaster}; contains Pfam
profile PF05793: Transcription initiation factor IIF,
alpha subunit (TFIIF-alpha)
Length = 543
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 60 NDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKC 119
+D+A+ D +E +L P +P I D++ + NE++ + + E +++ K
Sbjct: 296 DDEAVGNDPEEREDLLAPEIPAPPEIKQDEDDEENEEEEGGLSKSGKE----LKKLLGKA 351
Query: 120 NGLVEASAE 128
NGL E+ +
Sbjct: 352 NGLDESDED 360
>At4g05520.1 68417.m00838 calcium-binding EF hand family protein
similar to EH-domain containing protein 1 from {Mus
musculus} SP|Q9WVK4, {Homo sapiens} SP|Q9H4M9,
receptor-mediated endocytosis 1 from [Caenorhabditis
elegans] GI:13487775, GI:13487777, GI:13487779; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 546
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 117 PKCNGLVEASAETRIQALKAKIKD-MEKKQNGAAEVCWLESLKAKKICPQCNAITTAQHL 175
P GL ++ ++ ++D + K A+ W +S K PQ N +T L
Sbjct: 107 PVLEGLENVVSKQKVSKTNVDVEDNVVTKPQVTAKTPWFKSKSIIK--PQVNVVTIVDGL 164
Query: 176 RRIY 179
+R+Y
Sbjct: 165 KRLY 168
>At3g49390.1 68416.m05399 RNA-binding protein, putative RNA-binding
protein RBP37, Arabidopsis thaliana, PIR:T04196
Length = 353
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 87 PDDEHQTNEDQTDMQTTNET-ETEDRIEEPTPKCNGL 122
PDD+ D + T + T ET+DRI E K L
Sbjct: 36 PDDDQSPKSDSSTPLTIDSTPETDDRINETAQKVQTL 72
>At2g47620.1 68415.m05941 SWIRM domain-containing protein /
DNA-binding family protein contains similarity to
SWI/SNF complex 170 KDa subunit [Homo sapiens]
gi|1549241|gb|AAC50694; contains Pfam domains PF04433:
SWIRM domain, PF00249: Myb-like DNA-binding domain
Length = 512
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 81 SPSRIAPDDEHQTNEDQTDMQTTNETET----EDRIEEPTP 117
+PS I +DE+ T + QTD Q ETET EDR+ E P
Sbjct: 284 NPS-ILTEDEN-TEQVQTDGQEHEETETREEKEDRVNEDEP 322
>At2g38440.1 68415.m04721 expressed protein
Length = 1399
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 69 DEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIE-EPTPKCNGLVEASA 127
D T L G P + R +D ++ D T E+ETE E P + + L + +
Sbjct: 354 DSQTVLNGKPGFFQQRSYSEDLTSEADNYVDAPATMESETETDDECRPKSRSDTLKDGNH 413
Query: 128 ETRIQALKAKIKD 140
A++ +++D
Sbjct: 414 HIYSDAVEERMED 426
>At2g14910.2 68415.m01696 expressed protein
Length = 366
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/84 (17%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 68 GDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASA 127
G D+ +Y PD++H +++ + Q +ET E+ + + + +
Sbjct: 167 GGLDSHASENTEYDMEGTFPDEDHVSSKRDSRTQNLSETIDEEGLGRVSSEAQEYI-LRL 225
Query: 128 ETRIQALKAKIKDMEKKQNGAAEV 151
++++ ++K ++++M +K N A ++
Sbjct: 226 QSQLSSVKKELQEMRRK-NAALQM 248
>At2g14910.1 68415.m01695 expressed protein
Length = 386
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/84 (17%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 68 GDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASA 127
G D+ +Y PD++H +++ + Q +ET E+ + + + +
Sbjct: 167 GGLDSHASENTEYDMEGTFPDEDHVSSKRDSRTQNLSETIDEEGLGRVSSEAQEYI-LRL 225
Query: 128 ETRIQALKAKIKDMEKKQNGAAEV 151
++++ ++K ++++M +K N A ++
Sbjct: 226 QSQLSSVKKELQEMRRK-NAALQM 248
>At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 847
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 68 GDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASA 127
GDE+TE P+ + ++E Q E + + + E ++ E+ G E
Sbjct: 499 GDEETEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYRGDEGTEKQEIPKQGDEEMEG 558
Query: 128 ETRIQALKAKIKDMEK 143
E Q + K ++ EK
Sbjct: 559 EEEKQEEEGKEEEEEK 574
>At2g03500.1 68415.m00309 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 432
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/61 (18%), Positives = 26/61 (42%)
Query: 84 RIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEK 143
R++P +EH +D D N + NG+ ++++ +A + D+ +
Sbjct: 185 RVSPTNEHTNGQDGNDESMINNDNNYNNNNNNNSNSNGVSSTTSQSNRKARRCWSPDLHR 244
Query: 144 K 144
+
Sbjct: 245 R 245
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/83 (20%), Positives = 34/83 (40%)
Query: 40 RATALQDADSRAATCVRRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTD 99
R A + ++ + C+ + + ++ VVD D E+Y P DE++ + ++D
Sbjct: 731 RGLASSEVETLSPDCIDKVALPESKVVDKDSSQEIYQNGCVHNEPGVPCDENRVSGYESD 790
Query: 100 MQTTNETETEDRIEEPTPKCNGL 122
+ E E+ GL
Sbjct: 791 SKLQEIEELRSEKEKMAVDIEGL 813
>At1g11400.2 68414.m01310 expressed protein
Length = 204
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 76 GPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALK 135
GPP Y P AP + +T NE + E R++ K N + SA Q++
Sbjct: 70 GPPGYEPDP-AP-------KPKTKAAKRNERKKEKRLQATAEKANSSEDGSASNGSQSVN 121
Query: 136 AKIKDME 142
+ME
Sbjct: 122 VLASEME 128
>At1g11400.1 68414.m01309 expressed protein
Length = 204
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 76 GPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALK 135
GPP Y P AP + +T NE + E R++ K N + SA Q++
Sbjct: 70 GPPGYEPDP-AP-------KPKTKAAKRNERKKEKRLQATAEKANSSEDGSASNGSQSVN 121
Query: 136 AKIKDME 142
+ME
Sbjct: 122 VLASEME 128
>At1g08520.1 68414.m00943 magnesium-chelatase subunit chlD,
chloroplast, putative / Mg-protoporphyrin IX chelatase,
putative (CHLD) similar to Mg-chelatase SP|O24133 from
Nicotiana tabacum, GB:AF014399 GI:2318116 from [Pisum
sativum]
Length = 760
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 77 PPQYSPSRIAPDDEHQTNEDQTDMQTTNETE-TEDRIEE 114
PPQ S S ++E Q E++ + NE E +D+I E
Sbjct: 417 PPQNSESGEEENEEEQEEEEEDESNEENENEQQQDQIPE 455
>At5g52310.1 68418.m06492 low-temperature-responsive protein 78
(LTI78) / desiccation-responsive protein 29A (RD29A)
Length = 710
Score = 26.6 bits (56), Expect = 9.6
Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 16 DVENDEPSASGFGAEYQWCGEWRVRATALQDADSRAATCVRRASNDQALVVDGDEDTELY 75
D++ D P+ GF E + + R + D A S+D + + D +
Sbjct: 413 DIDKDVPT--GFDGEPDFLAKGRPGYGEASEEDKFPAR-----SDDVEVETELGRDPKTE 465
Query: 76 GPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETED 110
Q+SP P + + E + D + T + +TE+
Sbjct: 466 TLDQFSPELSHPKERDEFKESRDDFEETRDEKTEE 500
>At2g40020.1 68415.m04918 expressed protein
Length = 228
Score = 26.6 bits (56), Expect = 9.6
Identities = 13/67 (19%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 87 PDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEKKQN 146
P++E E +T+ + E ETE E+ + +++ + E + L+ ++++ ++
Sbjct: 161 PEEETDPEEKETEPEDPKEKETEPE-EDSDGDDDEIIQLTPEPLCEELQELLREVRGQKR 219
Query: 147 GAAEVCW 153
E+ W
Sbjct: 220 RKKEMRW 226
>At1g12260.1 68414.m01418 no apical meristem (NAM) family protein
similar to NAC2 (GI:6456751) [Arabidopsis thaliana];
contains Pfam PF02365 : No apical meristem (NAM) protein
Length = 395
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 7 DTSSEEGSIDVENDEPSASGFGAEY 31
DTS+ E +D E D AS G EY
Sbjct: 357 DTSNAEYQVDEEKDPKRASDMGEEY 381
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 26.6 bits (56), Expect = 9.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 108 TEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEKK 144
+E+RI++ P + ET Q LKA + ME+K
Sbjct: 1031 SEERIKDEVPVIDQSAIIKLETENQKLKALVSSMEEK 1067
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.309 0.125 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,476,448
Number of Sequences: 28952
Number of extensions: 185260
Number of successful extensions: 774
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 728
Number of HSP's gapped (non-prelim): 79
length of query: 180
length of database: 12,070,560
effective HSP length: 77
effective length of query: 103
effective length of database: 9,841,256
effective search space: 1013649368
effective search space used: 1013649368
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 56 (26.6 bits)
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