Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001737-TA|BGIBMGA001737-PA|undefined
(180 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 29 0.53
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 28 0.92
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 1.6
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 1.6
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 2.1
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 26 2.8
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 26 2.8
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 2.8
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 26 3.7
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.7
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 26 3.7
SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces ... 25 4.9
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 25 4.9
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 25 4.9
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 25 4.9
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 25 4.9
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 25 6.5
SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 25 6.5
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 25 6.5
SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein Sbp1|Schizosa... 25 8.6
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 25 8.6
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 28.7 bits (61), Expect = 0.53
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 85 IAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEAS 126
+ +D+ + ED+ D + T+E+E ++ + + P+ AS
Sbjct: 367 LGEEDDDENEEDEEDSEETSESEEDESVNDEKPQVIDQTNAS 408
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 27.9 bits (59), Expect = 0.92
Identities = 22/114 (19%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 2 DEDIPDTSSE-EGSIDVENDEPSASGFGAEYQWCGEWRVRATALQDADSRAATCVRRASN 60
D D +SS+ E E + S+S +E + E +++ D++S +++ +S+
Sbjct: 143 DSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSS 202
Query: 61 DQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEE 114
+ D ++E S S + + ++ED +++++E+E E+
Sbjct: 203 SSS-----DSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSED 251
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.1 bits (57), Expect = 1.6
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 17 VENDEPSASGFGAEYQWCGEWRVRATALQDADSRAATCVR 56
+ENDE S+S E+QW EW + D SR +R
Sbjct: 2005 LENDENSSSEQDDEFQW--EWNTETPSGADILSRHGALLR 2042
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.1 bits (57), Expect = 1.6
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 13/123 (10%)
Query: 7 DTSSEEGSIDVENDEPSASGFGAEYQWCGEWRVRATALQDADSRAATCVRRASNDQALVV 66
D++S E E DEP+ ++ E + A ++ADS A + ++
Sbjct: 370 DSTSVEAE-KTETDEPAVGKGASDVSDTAEISEKTEA-KNADSEANLEEKSDVGEEKESK 427
Query: 67 DGDEDTELYGPPQYSPSRIAPDDEHQTNED----QTDM-------QTTNETETEDRIEEP 115
D + L+ + ++I +D +T D +TD + T+ ETED++EE
Sbjct: 428 DENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDEKTDSKETEDKVEET 487
Query: 116 TPK 118
K
Sbjct: 488 ESK 490
Score = 26.2 bits (55), Expect = 2.8
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 85 IAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAE-TRIQALKAKIKDMEK 143
I DD+ + + + +T+++D E+P N AE + +K KI++
Sbjct: 502 IEVDDKEEKTDSKETADKVEQTDSKDTNEKPAKDDNKEANEKAEKVDSKDVKEKIEEAAD 561
Query: 144 KQNGAAE 150
QN E
Sbjct: 562 LQNSGKE 568
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 26.6 bits (56), Expect = 2.1
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 81 SPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKD 140
S S +E + E + D + ++E+E+E E + + + E S E+ + +K
Sbjct: 81 SESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDESERSGPSSFLKK 140
Query: 141 MEKKQ 145
EK++
Sbjct: 141 PEKEE 145
Score = 25.8 bits (54), Expect = 3.7
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 58 ASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTP 117
+S+ A VD E+ L + SR+ D+ + E+ ++ ++ + +E+E EE +
Sbjct: 9 SSDSDAESVDSSEENRL------TSSRLKKQDDSSSEEESSEEESASSSESESS-EEESE 61
Query: 118 KCNGLVEASAETRIQALKAKIKDMEKKQ 145
VE + + A + D E +
Sbjct: 62 SEESEVEVPKKKAVAASEDSESDSESSE 89
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 26.2 bits (55), Expect = 2.8
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 58 ASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETED 110
++ D+ D D E+Y + S PD+E++ E D E +
Sbjct: 612 STGDEGYSSDDSVDNEMYSDEENSSKGAFPDEENENRELSEDYSGDESLENSE 664
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 26.2 bits (55), Expect = 2.8
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 112 IEEPTPKCNGLVEASAE-TRIQALKAKIKDMEKKQNGAAEVCWLESLKAKK 161
+ P + L E AE R AL ++KD++KK + A + L+ L ++K
Sbjct: 879 LSNPLHNFSELEEKYAEYLRKLALLEEVKDLKKKLSKARSIMQLDELNSRK 929
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 26.2 bits (55), Expect = 2.8
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 97 QTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKD-MEKKQNGAAE 150
Q + + N +ET R E PT + E A R A+K I+ +++K A+
Sbjct: 492 QKNASSPNPSETNSRAETPTAAPPQISEEEASQRKDAIKLAIQQRIQEKAEAEAK 546
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 25.8 bits (54), Expect = 3.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 94 NEDQTDMQTTNETETEDRIEEPTP 117
NED++ Q +E+E ED I EP P
Sbjct: 187 NEDESS-QDESESEEEDDITEPVP 209
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 25.8 bits (54), Expect = 3.7
Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 14 SIDVENDEPSASGFGAEYQWCGEW-------RVRATALQDADSRAATCVRRASNDQALVV 66
S+++ P A G E W ++ + + TA Q + RA + + + A
Sbjct: 423 SLNMTLRSPKAGSAGKENSWRSKYLSEGKNSKAKYTAKQPSYDRAGSSLASPTKSSA--- 479
Query: 67 DGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIE 113
+ L P+ +P R+ +++ NEDQ +++ + + + I+
Sbjct: 480 -----SPLVKAPKETPERLCTENQSTENEDQANLKESELPKEKSDIQ 521
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 25.8 bits (54), Expect = 3.7
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 92 QTNEDQTDMQTTNETETEDRIEEPTPKCNGLVEASAETRIQALKAKIKDMEKK 144
+ E+ T+ + T+TE + VE +++Q+ K+KI E +
Sbjct: 11 EQEEEDTEFVPGDSTDTESSFSDADSSEEEFVEEKEASQVQSTKSKIATSESE 63
>SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 25.4 bits (53), Expect = 4.9
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 65 VVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRI---EEPTPKCNG 121
V+D D P Y PS+ + + E TD+ N +E +EPT + +
Sbjct: 387 VLDDGLDNNYEDIPLYGPSKDEELIKKEELEADTDLGLINTSEINQPANLPDEPTAETSN 446
Query: 122 LVEASAETRIQALKAKIKDMEKKQNGAAEV 151
V A+ + A KD EK + +V
Sbjct: 447 PVSATTVEAV-TTTADNKDEEKNDHVTEDV 475
>SPAC664.03 |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 457
Score = 25.4 bits (53), Expect = 4.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 66 VDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTP 117
V+G + EL + + SR + QTN + + Q N + +E + P P
Sbjct: 386 VEGSLNEELSEEEKPAESREQLESAEQTNGVKPETQAQNMSASESQANSPAP 437
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 25.4 bits (53), Expect = 4.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 2 DEDIPDTSSEEGSIDVEND 20
DEDIPD + +EG D E++
Sbjct: 88 DEDIPDGTEQEGLSDDEHE 106
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 25.4 bits (53), Expect = 4.9
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 77 PPQYSPSRIAPDDEHQTNED--QTDMQTTNETETEDRIEEPTPKCNGLVEAS 126
P ++P + ++E +TN D T + +NE + ++ P NG E +
Sbjct: 173 PVSFAPQKSPVENETETNVDNGDTKISESNEKSGTEVEQQSAPNSNGNEEVN 224
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 25.4 bits (53), Expect = 4.9
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 69 DEDTELYGPPQYSPSRIAPDDEHQTNE--DQTDMQTTNETETEDRIEEPTP 117
D+DT + P + P + D EH Q D+ + D + P P
Sbjct: 1766 DDDTTIRNAPSFRPQMGSFDAEHAVGATFSQDDLSDPARSVDSDSVSPPLP 1816
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.0 bits (52), Expect = 6.5
Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 5/148 (3%)
Query: 6 PDTSSEEGSIDVENDEPSASG-FGAEY-QWCGEWRVRATALQDADSRAATCVRRASNDQA 63
P ++++G+ + N EPS+S AE + E + ++ S ++ ++ +
Sbjct: 304 PQQTTQQGTQNSANAEPSSSASVPAEAPETEAEQSIDVSSDIGLRSDSSKPNEAPTSSEN 363
Query: 64 LVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETEDRIEEPTP-KCNGL 122
+ D E++ P+ +I +EH E Q T+E E + E+P+
Sbjct: 364 IKADQPENSTKQENPE-EDMQIKDAEEHSNLESTPAAQQTSEVEANNHQEKPSSLPAVEQ 422
Query: 123 VEASAETRIQALKAKIKDMEKKQNGAAE 150
+ + E + ++D +++ N AAE
Sbjct: 423 INVNEENNTPETEG-LEDEKEENNTAAE 449
>SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 603
Score = 25.0 bits (52), Expect = 6.5
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 145 QNGAAEVCWLESLKAKKICPQCNAITTAQ 173
QN A ++C L+ +K + P+C T Q
Sbjct: 3 QNKACDLCRLKKIKCSRGQPRCQTCTLFQ 31
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 25.0 bits (52), Expect = 6.5
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 55 VRRASNDQALVVDGDEDTELYGPPQYSPSRIAPDDEHQTNEDQTDMQTTNETETE 109
V+ + ND AL + ED + + S AP + Q + T TT ++E E
Sbjct: 410 VKTSPNDTALTLANAEDNKTFEHQPLSKDTEAP--KSQFSSSPTKESTTRKSEVE 462
>SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein
Sbp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 24.6 bits (51), Expect = 8.6
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 58 ASNDQALVVDGDEDTELYGPP-QYSPSRIAPDDEHQTNEDQTDMQ 101
++ND+ +GDED E P + P E +TNE++ ++
Sbjct: 52 STNDEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVE 96
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 24.6 bits (51), Expect = 8.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 88 DDEHQTNEDQTDMQTTNETETEDRIEEPTPKCNGL 122
D E T ED+ + E +E + E TPK N L
Sbjct: 60 DVEMDTMEDENENDEDTEQTSEKKETEETPKENPL 94
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.125 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 840,991
Number of Sequences: 5004
Number of extensions: 33549
Number of successful extensions: 123
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 108
Number of HSP's gapped (non-prelim): 28
length of query: 180
length of database: 2,362,478
effective HSP length: 69
effective length of query: 111
effective length of database: 2,017,202
effective search space: 223909422
effective search space used: 223909422
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 51 (24.6 bits)
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