Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001736-TA|BGIBMGA001736-PA|IPR007087|Zinc finger,
C2H2-type
(533 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 71 3e-13
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 70 9e-13
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 59 2e-09
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 57 7e-09
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 54 4e-08
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 54 5e-08
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 52 2e-07
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 50 6e-07
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 50 1e-06
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 49 2e-06
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 46 1e-05
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 38 0.005
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 37 0.006
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 31 0.30
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 31 0.30
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 31 0.30
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 31 0.40
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 31 0.40
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 31 0.40
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 31 0.40
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 31 0.53
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 31 0.53
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 29 1.2
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 29 1.6
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 29 1.6
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 2.1
SPBC31F10.04c |srb4|med17|mediator complex subunit Srb4|Schizosa... 28 3.7
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 28 3.7
SPAC17C9.14 |||Pex19 protein family|Schizosaccharomyces pombe|ch... 28 3.7
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 28 3.7
SPAC3F10.08c |||rRNA processing protein Faf1|Schizosaccharomyces... 28 3.7
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 27 4.9
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 27 4.9
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 27 4.9
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 27 6.5
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 27 6.5
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc... 27 6.5
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 8.6
SPBC8D2.13 |||SHQ1 family protein|Schizosaccharomyces pombe|chr ... 27 8.6
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 27 8.6
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 71.3 bits (167), Expect = 3e-13
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 436 CGKKFSSNAFLRYHQRIHTGEKPYSCETCSRRFTEKNQLRIHVRTHTGEKPYCCIVCGRS 495
C K+F+ L+ H HT +P+ C C + F ++ R H + HTG K + C+ C +
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 496 FSQKPALNRHYR 507
F++ ALNRHY+
Sbjct: 637 FARMDALNRHYK 648
Score = 54.4 bits (125), Expect = 4e-08
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 404 CGGSFANKSKLQAHINRMHLGIKYN-KDIVCEVCGKKFSSNAFLRYHQRIHTGEKPYSCE 462
C + NK +A+ + H+ N + C +C K F+ R H+++HTG K ++C
Sbjct: 572 CTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACV 631
Query: 463 TCSRRFTEKNQLRIHVRTHTGE 484
TC++RF + L H ++ G+
Sbjct: 632 TCNQRFARMDALNRHYKSEVGQ 653
Score = 35.5 bits (78), Expect = 0.019
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 18/118 (15%)
Query: 302 HGLLMHKTKAHKSSESNPEDGSPGEGFC--AECDIRFTTLEAWKRHMICSINHRYDNSLK 359
+ L+ +K++ SS++ E S G C A C+ RFT K HM N+R +
Sbjct: 545 NSLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYR---PFQ 601
Query: 360 CKICNIKYSSADSFTVHMKEHLKSLKRHRGPPGDTGQTKVACDQCGGSFANKSKLQAH 417
C IC ++ ++H K +RH TG AC C FA L H
Sbjct: 602 CSICKKSFA---------RQHDK--RRHE--QLHTGIKAFACVTCNQRFARMDALNRH 646
Score = 26.6 bits (56), Expect = 8.6
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 14/84 (16%)
Query: 262 CNKCGTISHTIKPTSYLTHKRKRHPSKYICNLCGESFIGAHGLLMHKTKAHKSSESNPED 321
CNK T ++ +K + TH R + C++C +SF H H+ + H ++
Sbjct: 577 CNKRFTRAYNLK-SHMNTHTNYR---PFQCSICKKSFARQHDKRRHE-QLHTGIKAFA-- 629
Query: 322 GSPGEGFCAECDIRFTTLEAWKRH 345
C C+ RF ++A RH
Sbjct: 630 -------CVTCNQRFARMDALNRH 646
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 203 PFKCNLCFRGFVFEQAYVNHKMKHDQVNGPHQCPVCKMHYRTQRHLRVH 251
PF+C++C + F + H+ H + C C + L H
Sbjct: 599 PFQCSICKKSFARQHDKRRHEQLHTGIKA-FACVTCNQRFARMDALNRH 646
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 69.7 bits (163), Expect = 9e-13
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 434 EVCGKKFSSNAFLRYHQRIHTGEKPYSCE--TCSRRFTEKNQLRIHVRTHTGEKPYCCIV 491
E CGKK+S + L H R H+ E+P+ C+ CS+ F K+ L+IH R HT KP+ C
Sbjct: 28 EECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHY 87
Query: 492 --CGRSFSQKPALNRHYRVRGSRLPVVGCLEAC 522
C F + L RH V P E C
Sbjct: 88 DGCDAQFYTQQHLERHIEVHRKPKPYACTWEGC 120
Score = 64.9 bits (151), Expect = 3e-11
Identities = 67/273 (24%), Positives = 107/273 (39%), Gaps = 40/273 (14%)
Query: 245 QRHLRVHSVTAHERLYRCNKCGTISHTIKPTSYLTHKRKRHPSK-YICNL--CGESFIGA 301
++HLR HS +ER + C+ G + + HKR K + C+ C F
Sbjct: 41 EQHLRTHS---NERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQ 97
Query: 302 HGLLMHKTKAHKSSESNPEDGSPGEGFCAECDIRFTTLEAWKRHMICSINHRYDNSLKCK 361
L H + H+ + EG C EC F+ + + H+ H +
Sbjct: 98 QHLERH-IEVHRKPKPY---ACTWEG-CDEC---FSKHQQLRSHISACHTHLLPYPCTYQ 149
Query: 362 ICNIKYSSADSFTVHMKEHLKSLKRHRGPPGDTGQTKVACDQCGG--SFANKSKLQAHIN 419
C +++++ H+ + + + P + C G F S+LQ HI
Sbjct: 150 DCELRFATKQKLQNHVNRAHEKIISYSCPH----------ESCVGHEGFEKWSQLQNHIR 199
Query: 420 RMHLGIKYNKDIVCEVCGKKFSSNAFLRYHQRIHTG----EKPYSC--ETCSRRFTEKNQ 473
H+ C +CG++F + A LR+H +H K Y C E C + FT +
Sbjct: 200 EAHVPS-------CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSA 252
Query: 474 LRIHVRT-HTGEKPYCCIVCGRSFSQKPALNRH 505
L+ H+ H G + C CG F K L RH
Sbjct: 253 LKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRH 285
Score = 50.0 bits (114), Expect = 8e-07
Identities = 53/186 (28%), Positives = 73/186 (39%), Gaps = 25/186 (13%)
Query: 332 CDIRFTTLEAWKRHMICSINHRYDNSLKCKICNIKYSSADS-FTVH--MKEHLKSLKRHR 388
CD +F T + +RH+ HR C + D F+ H ++ H+ + H
Sbjct: 90 CDAQFYTQQHLERHIEV---HRKPKPYACT-----WEGCDECFSKHQQLRSHISACHTHL 141
Query: 389 GPPGDTGQTKVACDQCGGSFANKSKLQAHINRMHLGIKYNKDIVCEVCGKKFSSNAFLRY 448
P T Q C FA K KLQ H+NR H I + E C + +
Sbjct: 142 LPYPCTYQ------DCELRFATKQKLQNHVNRAHEKI-ISYSCPHESCVGHEGFEKWSQL 194
Query: 449 HQRIHTGEKPYSCETCSRRFTEKNQLRIHVRTH----TGEKPYCCIV--CGRSFSQKPAL 502
I P SC C R+F LR HV H K Y C + C +SF++ AL
Sbjct: 195 QNHIREAHVP-SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSAL 253
Query: 503 NRHYRV 508
+H V
Sbjct: 254 KKHISV 259
Score = 39.5 bits (88), Expect = 0.001
Identities = 71/285 (24%), Positives = 99/285 (34%), Gaps = 27/285 (9%)
Query: 157 ECQKTNRRRSNKRTEQKIDSEEIKLSREEQMEALLKRSKSLNYINSPFKCNL--CFRGFV 214
E + N R + K + K SR +E L+ + PF C+ C + F
Sbjct: 10 EIESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSN----ERPFVCDYTGCSKAFY 65
Query: 215 FEQAYVNHKMKHDQVNGPHQCPV--CKMHYRTQRHLRVH-SVTAHERLYRCNKCGTISHT 271
+ HK H V P C C + TQ+HL H V + Y C G
Sbjct: 66 RKSHLKIHKRCHTNVK-PFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECF 124
Query: 272 IKPTSYLTHKRKRHPS--KYICNL--CGESFIGAHGLLMHKTKAHKS--SESNPEDGSPG 325
K +H H Y C C F L H +AH+ S S P + G
Sbjct: 125 SKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVG 184
Query: 326 -EGFCAECDIRFTTLEAWKRHM-ICSINHRYDNSLKCKICNIKYSSADSFTVHM------ 377
EGF ++ EA IC + L+ + + + + T H
Sbjct: 185 HEGFEKWSQLQNHIREAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCK 244
Query: 378 KEHLKS--LKRHRGPPGDTGQTKVACDQCGGSFANKSKLQAHINR 420
K +S LK+H + G CD CG F K LQ H+ R
Sbjct: 245 KSFTRSSALKKHISVIHE-GNMAFHCDSCGTKFGYKHMLQRHLER 288
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 455 GEKPYSCETCSRRFTEKNQLRIHVRT-HTGEKPYCCIVCGRSFSQKPALNRHYRVRGSRL 513
G K + C CS++F LR H+R+ HT EKP+ CI CG+ FS++ L +H R+ +
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNAS 477
Query: 514 PVVGC 518
P + C
Sbjct: 478 PRLAC 482
Score = 56.4 bits (130), Expect = 9e-09
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 429 KDIVCEVCGKKFSSNAFLRYHQR-IHTGEKPYSCETCSRRFTEKNQLRIHVRTHTGEKP 486
K VC C KKF + LR H R +HT EKP+ C C +RF+ ++ LR H R H P
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 386 RHRGPPGDTGQTKVACDQCGGSFANKSKLQAHINRMHLGIKYNKDIVCEVCGKKFSSNAF 445
R P G C +C F L+ HI +H K VC +CGK+FS
Sbjct: 410 RKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTS---EKPFVC-ICGKRFSRRDN 465
Query: 446 LRYHQRIHTGEKP 458
LR H+R+H P
Sbjct: 466 LRQHERLHVNASP 478
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 56.8 bits (131), Expect = 7e-09
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 436 CGKKFSSNAFLRYHQRIHTGEKPYSCETCSRRFTEKNQLRIHVRTHTGEKPYCCIVCGRS 495
C K+ + + H + H ++PY C+ C F + L+ H+R H +PY C C +
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Query: 496 FSQKPALNRH 505
F++ ALNRH
Sbjct: 509 FNRLDALNRH 518
Score = 44.8 bits (101), Expect = 3e-05
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 389 GPPGDTGQTKVACDQCGGSFANKSKLQAHINRMHLGIKYNKDIVCEVCGKKFSSNAFLRY 448
GP D G+ + C A K +++HI + HL ++ C++C F + L+
Sbjct: 436 GPEAD-GKYVCLYNGCNKRIARKYNVESHI-QTHLS---DRPYRCDLCKAGFVRHHDLKR 490
Query: 449 HQRIHTGEKPYSCETCSRRFTEKNQLRIH 477
H RIH +PY CE C +RF + L H
Sbjct: 491 HLRIHENGRPYVCE-CLKRFNRLDALNRH 518
Score = 44.8 bits (101), Expect = 3e-05
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 464 CSRRFTEKNQLRIHVRTHTGEKPYCCIVCGRSFSQKPALNRHYRVRGSRLP-VVGCLE 520
C++R K + H++TH ++PY C +C F + L RH R+ + P V CL+
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCECLK 507
Score = 29.5 bits (63), Expect = 1.2
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 17/85 (20%)
Query: 262 CNKCGTISHTIKPTSYL-THKRKRHPSKYICNLCGESFIGAHGLLMHKTKAHKSSESNPE 320
CNK I+ S++ TH R Y C+LC F+ H L H + H E
Sbjct: 450 CNK--RIARKYNVESHIQTHLSDR---PYRCDLCKAGFVRHHDLKRH-LRIH-------E 496
Query: 321 DGSPGEGFCAECDIRFTTLEAWKRH 345
+G P + EC RF L+A RH
Sbjct: 497 NGRP---YVCECLKRFNRLDALNRH 518
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 203 PFKCNLCFRGFVFEQAYVNHKMKHDQVNG-PHQCPVCKMHYR 243
P++C+LC GFV H H+ NG P+ C K R
Sbjct: 472 PYRCDLCKAGFVRHHDLKRHLRIHE--NGRPYVCECLKRFNR 511
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
Query: 232 PHQCPVCKM----HYRTQRHLRVH 251
P++C +CK H+ +RHLR+H
Sbjct: 472 PYRCDLCKAGFVRHHDLKRHLRIH 495
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 54.4 bits (125), Expect = 4e-08
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Query: 457 KPYSCETCSRRFTEKNQLRIHVRTHTGEKPYCC-------IVCGRSFSQKPALNRH 505
K Y CETC+R F L+ H+R+HT EKP+ C CGR FS++ L RH
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRH 123
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 429 KDIVCEVCGKKFSSNAFLRYHQRIHTGEKPYSCET-------CSRRFTEKNQLRIH-VRT 480
K VCE C + F+ L+ H R HT EKP++C C R+F+ ++ L H +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 481 HTGEKP 486
H +P
Sbjct: 128 HRNPQP 133
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 54.0 bits (124), Expect = 5e-08
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 457 KPYSCETCSRRFTEKNQLRIHVRTHTGEKPYCCIV--CGRSFSQKPALNRHYRV 508
+PY C C++ F H+RTHTGEKP+ C C + FS+ L RH R+
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARI 77
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 433 CEVCGKKFSSNAFLRYHQRIHTGEKPYSC--ETCSRRFTEKNQLRIHVRTHT 482
C +C K F H R HTGEKP+ C C++RF+ ++L H R HT
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 7/56 (12%)
Query: 203 PFKCNLCFRGFVFEQAYVNHKMKHDQVNGPHQC--PVCKMHY----RTQRHLRVHS 252
P+KC LC + F + H H PH C P C + RH R+H+
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIRTHTG-EKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 225 KHDQVNGPHQCPVC-KMHYRTQ---RHLRVHS 252
K+ P++CP+C K YR + RH+R H+
Sbjct: 18 KNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHT 49
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 459 YSCETCSRRFTEKNQLRIHVRTHTGEKPYCC--IVCGRSFSQKPALNRHYRVRG 510
Y C C + F+ + L+IH +HTGE+P+ C CG++F+ + + RH R+ G
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIHG 521
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 415 QAHINRMHLGIKYNKDIVCEVCGKKFSSNAFLRYHQRIHTGEKPYSCE--TCSRRFTEKN 472
Q+H N C C + FS + L+ H HTGE+P+ C+ C + F ++
Sbjct: 452 QSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRS 511
Query: 473 QLRIHVRTH 481
+R H R H
Sbjct: 512 NMRRHQRIH 520
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 50.4 bits (115), Expect = 6e-07
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 429 KDIVCEVCGKKFSSNAFLRYHQRIHTGEKPYSCE--TCSRRFTEKNQLRIHVRTH 481
K C C + F H R HTGEKP+ C +C +RFT +++L HVRTH
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 457 KPYSCETCSRRF-TEKNQLRIHVRTHTGEKPYCCIV--CGRSFSQKPALNRHYR 507
K Y C C R F +++Q+R H+R+HTGEKP+ C C + F+++ L RH R
Sbjct: 2 KSYECPFCKRVFHRQEHQVR-HIRSHTGEKPFECSYPSCKKRFTRRDELIRHVR 54
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 446 LRYHQRIHT-GEKPYSCE--TCSRRFTEKNQLRIHVRTHTGEKPYCCIVCGRSFSQKPAL 502
L+ R H G+ + C C + FT K LR H RTH K + C C R+F++ L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 503 NRH 505
NRH
Sbjct: 72 NRH 74
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 436 CGKKFSSNAFLRYHQRIHTGEKPYSCETCSRRFTEKNQLRIHVR 479
C K F+ LR H+R H K +SC C+R F + L HV+
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 26.6 bits (56), Expect = 8.6
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
Query: 372 SFTVHMKEHLKSLKRHRGPPGDTGQTKVACDQCGGSFANKSKLQAHINRMHL 423
SFT KEHL+ RH + +C C +FA L H+ +MHL
Sbjct: 36 SFT--RKEHLR---RHERTHENV--KAFSCSFCNRAFARSDVLNRHVQQMHL 80
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 455 GEKPYSCET--CSRRFTEKNQLRIHVRTHTGEKPYCCIVCGRSFSQKPALNRH 505
G+ Y C+ C++ FT K R H R+HT K + C C SF++ LNRH
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 425 IKYNKDIVCEVCGKKFSSNAFLRYHQRIHTGEKPYSCETCSRRFTEKNQLRIHV 478
I+Y D + C K F+ R H R HT K + C CS FT + L HV
Sbjct: 15 IRYKCDF--QGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 46.0 bits (104), Expect = 1e-05
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 453 HTGEK--PYSCE--TCSRRF---TEKNQLRIHVRTHTGEKPYCCIV--CGRSFSQKPALN 503
H G + Y+CE C R+ T + L H+R+HTGEKP+ C V C RSF++ AL
Sbjct: 65 HIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALA 124
Query: 504 RHYR 507
+H R
Sbjct: 125 KHMR 128
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 433 CEVCGKKFSSNAFLRYHQRIHTGEKPYSCET--CSRRFTEKNQLRIHVRT 480
C G +S L H R HTGEKP+ C C R FT + L H+RT
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 449 HQRIHTGEKPYSCETCSRRFTEKNQLRIHVRTHT 482
HQ KPY CE CS+R+ N L+ H RTH+
Sbjct: 389 HQGFVVENKPYRCEVCSKRYKNLNGLKYH-RTHS 421
Score = 35.9 bits (79), Expect = 0.014
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 229 VNGPHQCPV--CKMHYRTQRHLRVHSVTAHERLYRCNKCGTISHTIKPTSYLTHKRKRHP 286
V+ P++CPV C Y+ Q L+ H + H C+ T + P + K
Sbjct: 346 VDKPYKCPVPNCDKAYKNQNGLKYHKLHGH-----CSPITTPTPAPIPHQGFVVENK--- 397
Query: 287 SKYICNLCGESFIGAHGLLMHKTKAH 312
Y C +C + + +GL H+T +H
Sbjct: 398 -PYRCEVCSKRYKNLNGLKYHRTHSH 422
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 428 NKDIVCEVCGKKFSSNAFLRYHQRIHT 454
NK CEVC K++ + L+YH R H+
Sbjct: 396 NKPYRCEVCSKRYKNLNGLKYH-RTHS 421
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 37.1 bits (82), Expect = 0.006
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 456 EKPYSCETCSRRFTEKNQLRIHVRTHTGEKPYCCIVCGRSFSQKPALNRH 505
++ + C+ C++RFT L H H+ +P C C +K L RH
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
Score = 29.9 bits (64), Expect = 0.92
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 329 CAECDIRFTTLEAWKRHMICSINHRYDNSLKCKICNIKYSSADSFTVHMK 378
C +C RFT E RH C H + C C IK D H++
Sbjct: 33 CDQCAKRFTRHENLTRHKAC---HSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 31.5 bits (68), Expect = 0.30
Identities = 21/101 (20%), Positives = 42/101 (41%)
Query: 96 KKEITEQNINEXXXXXXXXXXXXXXXFNIDDGNNATDSEDDVPLKSIFKKDKEKQVPREM 155
K+ + EQN+ E + N + + + KD+E++ +E+
Sbjct: 82 KRNVEEQNLIEQSITESQRIFSEKQRLEQERFNRELLEKKRIEAERQRLKDEEERRKKEL 141
Query: 156 SECQKTNRRRSNKRTEQKIDSEEIKLSREEQMEALLKRSKS 196
E +K + R EQK E + ++EQ++A K ++
Sbjct: 142 MEKEKKEKERIRLIEEQKHKENEQRRLKQEQIDAKRKEEEA 182
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 31.5 bits (68), Expect = 0.30
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 462 ETCSRRFTEKNQLRIHVRT-HTGEKP-YCCIVCG--RSFSQKPALNRHYRVRGSR 512
E C+ F+ L H T H +P + C +CG R FS+ AL RH RV+ R
Sbjct: 583 EICNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVKHGR 637
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 31.5 bits (68), Expect = 0.30
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 142 IFKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSREEQMEALLKRSKSLNYIN 201
IFK+ K+++ R ++ +R SN+ +E +D+ I+ S E Q ++ SKS +
Sbjct: 394 IFKRLKQQE-DRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSVDT 452
Query: 202 SPFK 205
P K
Sbjct: 453 KPPK 456
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 31.1 bits (67), Expect = 0.40
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 123 NIDDGNNATDSEDDVPLKSIF-KKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKL 181
N +ATD E + ++ F +D+E +VP+E+ +K + + + +D E+++L
Sbjct: 52 NDSSEESATDEEAERQVREGFIVEDEEDEVPQEIRRKKKRKKHAESTADQDMLDEEDLEL 111
Query: 182 SRE 184
E
Sbjct: 112 VME 114
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 31.1 bits (67), Expect = 0.40
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 127 GNNATDSEDDVPLKSIFKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSREEQ 186
G +AT ++ L+S K +EKQ+ E+++ + TN + +++ T++ + ++ EQ
Sbjct: 360 GEHAT--HENTSLESQLLK-REKQLSEELAKLRSTNAQLTDRITQESKKASFLEQKASEQ 416
Query: 187 MEALLKRSKSL 197
E + K K L
Sbjct: 417 EEVIRKLEKDL 427
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 31.1 bits (67), Expect = 0.40
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 220 VNHKMKHDQVNGPHQCPVCKMHYRTQRHLRVHSVTAHERLYRCNKCGTISHTIKPTSYLT 279
V +M++D + + CP C + + L V S+ +E + CN CGT + ++ +
Sbjct: 123 VEDRMRNDFDSKGYVCPFCNKKFSS---LDVLSLVTNEGTFACNVCGTELKDDEESAEMM 179
Query: 280 HKRKR 284
+KR
Sbjct: 180 SSQKR 184
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 428 NKDIVCEVCGKKFSSNAFLRYHQRIHTGEKPYSCETCSRRFTEKNQ 473
+K VC C KKFSS L + T E ++C C + +
Sbjct: 133 SKGYVCPFCNKKFSSLDVL----SLVTNEGTFACNVCGTELKDDEE 174
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 31.1 bits (67), Expect = 0.40
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 194 SKSLNYINSPFKCNLCFRGFVFEQAYVNHKMKHDQV 229
SK N N+ F+C+ C FV + NHK + QV
Sbjct: 129 SKQPNMPNATFRCDKCDMMFVKQSGLTNHKRTYHQV 164
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 30.7 bits (66), Expect = 0.53
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 132 DSEDDVPLKSIFKKDKEKQVPREMSECQ-------KTNRRRSNKRTEQKIDSEEIKLSRE 184
D E L+ ++ E +V R S C K N T++KID + K S
Sbjct: 189 DKESLTDLRFFSNEEAESKVTRVKSSCLLTLSFLFKQTADLENLETDKKIDKQTFKSSLY 248
Query: 185 EQMEALLKRSKSLNYINSP 203
E + L K + + ++SP
Sbjct: 249 ENLSTLFKSDEFWSLVSSP 267
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.7 bits (66), Expect = 0.53
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 145 KDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSREEQMEALLKRSKSLNYINSPF 204
+++EK ++M E +K + R + +Q+ E + RE++ L++ + LN
Sbjct: 114 REQEKIAAKKMKELEKLEKERIRLQEQQRRKEERDQKLREKEEAQRLRQEQILNKERQQL 173
Query: 205 KCNLCFRGFVFEQAYVNHKMKHDQVN 230
K N F V ++ N D+ +
Sbjct: 174 KLNNFFTKGVEKRIAPNENFVADKTD 199
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 166 SNKRTEQKIDSEEIKLSREEQMEALLKRSKSLNYINSPFKCNLCFRGFVFEQAYVNHKMK 225
S + TE ++ S I + + LKR + + NS K RGF+ Q + K K
Sbjct: 808 SRRHTEYELLSSNI-IKLQSLWRTALKRKEFIQTKNSILKVQSIIRGFLLRQT-LEEKTK 865
Query: 226 HD 227
HD
Sbjct: 866 HD 867
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/68 (22%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 129 NATDSEDDVPLKSIFKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSREEQME 188
+A +S++DV + + +K K+K + ++ + + + + K+ ++K + K E E
Sbjct: 437 DAEESQEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKK-DKKHKKSKRKSEESEDGE 495
Query: 189 ALLKRSKS 196
+ K+ KS
Sbjct: 496 SPKKKKKS 503
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 29.1 bits (62), Expect = 1.6
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 231 GPHQCPVCKMHYRTQRHLRVHSVTAHERLYRCNK-CGTISHTIKPTSYLTHKRKRHPSKY 289
G +C C H+ L H HER Y C++ G +H +Y + +R Y
Sbjct: 243 GHPKCEFCNTHFYDDDELFKHCREKHERCYICDQVAGRPTHQYF-KNYDSLERHFEKDHY 301
Query: 290 IC 291
IC
Sbjct: 302 IC 303
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 42 NELMLKALNSEMFLAELGRSGVQLTEQVIETNSHHESLLSQSKIET 87
N + K+LN ++ EL S + E+VIET S E + + T
Sbjct: 367 NNVPSKSLNDDITQDELNSSNADVDEEVIETTSLEEKNVDNQEFVT 412
>SPBC31F10.04c |srb4|med17|mediator complex subunit
Srb4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/70 (18%), Positives = 31/70 (44%)
Query: 89 EIQEVYVKKEITEQNINEXXXXXXXXXXXXXXXFNIDDGNNATDSEDDVPLKSIFKKDKE 148
+++E ++KE+ +++I + +D N D+E + +KK+
Sbjct: 50 DLKEEDLQKELQKESIKDESSAKSSETENVLEFATLDSKRNVNDTEVESMDSQAYKKELI 109
Query: 149 KQVPREMSEC 158
+Q+ +EC
Sbjct: 110 EQIMIAQTEC 119
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 125 DDGNNATDSEDDVPLKSIFKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSRE 184
+D ++ +DS+ VPL + KK +++ E Q + S K + K +E + R
Sbjct: 444 NDSDSDSDSDSSVPLSQLQKKSQQRN--SVSHEIQNRGTKGSPKEPKAKPSTERPETHRT 501
Query: 185 EQMEALLKRSKSLN 198
L + SK+ +
Sbjct: 502 LSYSRLSELSKTFS 515
>SPAC17C9.14 |||Pex19 protein family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 232
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 123 NIDDGNNATDSEDDVPLKSIFKKDKEKQVP--REMSECQKTNRRRSN 167
N DD ++ D DD+ + S FK +++K + ++ K N R N
Sbjct: 23 NFDDLDDLDDILDDLDVPSAFKNEEKKNIDEHKQTGNTSKENERIKN 69
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 134 EDDVPLKSIFKKDKE--KQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSR 183
+ + PL++ K + E + P E Q+TN ++ K ++ K++S+E K+SR
Sbjct: 132 KSEKPLETSQKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKEEKISR 183
>SPAC3F10.08c |||rRNA processing protein Faf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 139 LKSIFKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSREEQMEALLKRSKSLN 198
LK + K + E+++ + E QK R+RS + + D E L + +++ LL+ S L+
Sbjct: 94 LKKMPKLEDEEEILAKKREEQKL-RKRSRQNDDGSDDDEVENLKNDLELQKLLRESHLLH 152
Query: 199 YINS 202
S
Sbjct: 153 EATS 156
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/66 (21%), Positives = 34/66 (51%)
Query: 130 ATDSEDDVPLKSIFKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSREEQMEA 189
+T +E+D K +++ P + + +R+ + EQ+I EE +++ EE+ A
Sbjct: 223 STPAENDSSAKGKQAAGSKRKGPNVTALQKMLEEKRAREEEEQRIREEEARIAEEEKRLA 282
Query: 190 LLKRSK 195
++ ++
Sbjct: 283 EVEEAR 288
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 27.5 bits (58), Expect = 4.9
Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 5/130 (3%)
Query: 60 RSGVQLTEQVIETNSHHESLLSQSKIETVEIQEVYVKKEITEQNINEXXXXXXXXXXXXX 119
R + L E+ + + H+ + + E Q V++ EQ I +
Sbjct: 691 REAIPLWEEDAKQQAEHDREIFYER----EKQRKEVQERKHEQAIKDKKAFAQFASYIHA 746
Query: 120 XXFNIDDGNNATDSEDDVPLKSIFKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI 179
NIDD + E K++ ++E+Q +E+ E + R + + EE
Sbjct: 747 YKQNIDDERDKAYQEAYAKAKNVIDAERERQ-RKEIFEQKLAEAIREAEEEAARAAEEEA 805
Query: 180 KLSREEQMEA 189
EQ EA
Sbjct: 806 NRELHEQEEA 815
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 130 ATDSEDDVPLKSIFKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSR-EEQME 188
AT +DV LK+I KK+K ++ + + Q++N + ++ Q E+K + E
Sbjct: 58 ATSESEDVTLKNIAKKNKRERNDKLIP--QQSNESEAIEKPVQSTTEVELKTNELAESNS 115
Query: 189 ALLKRSKSLNYINSPFK 205
++ +Y +P K
Sbjct: 116 SVAVEGDENSYAETPKK 132
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 135 DDVPLKSIFKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLS 182
D +P +I KK+ S +K+ ++SNK + DS+ + LS
Sbjct: 329 DPIPEGTIIKKESSDDAM--FSGLKKSKPKKSNKSNNNQADSDRLNLS 374
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/51 (23%), Positives = 29/51 (56%)
Query: 145 KDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSREEQMEALLKRSK 195
KD E+ + + + +K ++ S+ E+K + ++ L R+++ E LK+ +
Sbjct: 163 KDNEQLLKKSIRRKEKEKKKSSDAWKERKDNEKKAMLMRQQRREENLKKRR 213
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 126 DGNNATDSEDDVPLKSIFKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSREE 185
+G D+E + KSI +K+KEK+ + + +K N +++ +Q+ + E +K RE
Sbjct: 158 EGKKLKDNEQLLK-KSIRRKEKEKKKSSDAWKERKDNEKKAMLMRQQRRE-ENLKKRRES 215
Query: 186 Q 186
+
Sbjct: 216 K 216
>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 489
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 160 KTNRRRSNKRTEQKIDSEEIKLSREEQMEALLKRSKSLNYIN 201
K + R N+R +++ + +E++LS + + + K+L Y+N
Sbjct: 80 KMDLHRKNERKKREKERKEVELSNRKHLANIRVVQKNLAYVN 121
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 141 SIFKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSREEQMEALLKRSKSL 197
S F ++ K+V + +EC++ S K+ EE+K+ + ++EALL + SL
Sbjct: 658 STFAAEQSKEVAKLQAECKRLQAINS------KV-MEEVKVYNDSRVEALLAKVSSL 707
>SPBC8D2.13 |||SHQ1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 451
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 172 QKIDSEEIKLSREEQMEALLKRSKSLNYINSPFKCNLCFRGFVFEQAYVN 221
Q+ S+ + E+ EAL K K I++P LC +F AY N
Sbjct: 245 QQGKSDRLLEFTSEEKEALAKLPKRSYLIDNPKNVYLCLVPLIFAYAYDN 294
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/50 (26%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 124 IDDGNNATDSEDDVPLKSIFKKDKEKQVPREMSECQKTNRRRSNKRTEQK 173
++ NNA +SE + KS+ ++++++ + S TN++ NK+ ++K
Sbjct: 58 LEKENNAINSEAE---KSVSEEEQDEPLVEGESPIVSTNKKAKNKKKKKK 104
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.133 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,462,492
Number of Sequences: 5004
Number of extensions: 106093
Number of successful extensions: 532
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 406
Number of HSP's gapped (non-prelim): 107
length of query: 533
length of database: 2,362,478
effective HSP length: 76
effective length of query: 457
effective length of database: 1,982,174
effective search space: 905853518
effective search space used: 905853518
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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