GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001736-TA|BGIBMGA001736-PA|IPR007087|Zinc finger,
C2H2-type
         (533 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...   101   6e-23
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    35   0.006
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    30   0.18 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    29   0.24 
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    28   0.72 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.72 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   6.7  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score =  101 bits (241), Expect = 6e-23
 Identities = 84/339 (24%), Positives = 133/339 (39%), Gaps = 42/339 (12%)

Query: 175 DSEEIKLSREEQMEALLKRSKSLNY-INSPFKCNLCFRGFVFEQAYV-NHKMKHDQVNGP 232
           D + I    +E  +    R K       S + CN C   +   + ++ +  +K    + P
Sbjct: 97  DPDYIVQEEQEPAKKTQTRGKRTQQSTGSTYMCNYC--NYTSNKLFLLSRHLKTHSEDRP 154

Query: 233 HQCPVCKMHYRT----QRHLRVHSVTAHERLYRCNKCGTISHTIKPTSYLTHKRKRHPSK 288
           H+C VC+  ++T    Q H+  H+ T   R   C+ C T S  +     + H R RH  +
Sbjct: 155 HKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGEL-----IRHIRYRHTHE 209

Query: 289 --YICNLCGESFIGAHGLLMHKTKAHKSSESNPEDGSPGEGFCAECDIRFTTLEAWKRHM 346
             + C  C  + +      + K K H  + +  +   P +  C  C           RHM
Sbjct: 210 RPHKCTECDYASVE-----LSKLKRHIRTHTGEK---PFQ--CPHCTYASPDKFKLTRHM 259

Query: 347 ICSINHRYDNSLKCKICNIKYSSADSFTVHMKEHLKSLKRHRGPPGDTGQTKVACDQCGG 406
                H  +    C +C  +++ ++S   H   H    K          Q K+    CG 
Sbjct: 260 RI---HTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNK-------PVFQCKLCPTTCG- 308

Query: 407 SFANKSKLQAHINRMHLGIKYNKDIVCEVCGKKFSSNAFLRYHQRIHTGEKPYSCETCSR 466
               K+ L+ H+  +H     +K I C+ C   F      + H + H GEK Y CE C  
Sbjct: 309 ---RKTDLRIHVQNLHTA---DKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPY 362

Query: 467 RFTEKNQLRIHVRTHTGEKPYCCIVCGRSFSQKPALNRH 505
                  L  H+  HT +KPY C  C ++F QK  L RH
Sbjct: 363 ASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRH 401



 Score = 87.8 bits (208), Expect = 6e-19
 Identities = 101/412 (24%), Positives = 154/412 (37%), Gaps = 55/412 (13%)

Query: 129 NATDSEDDVPLKSIFK-KDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEI--KLSREE 185
           N   S+ D     I+  +D +  V  E    +KT  R   KRT+Q   S  +    +   
Sbjct: 79  NDEPSQGDSKDNEIYDFEDPDYIVQEEQEPAKKTQTR--GKRTQQSTGSTYMCNYCNYTS 136

Query: 186 QMEALLKRSKSLNYINSPFKCNLCFRGFVFEQAYVNHKMKHDQVNGPHQCPVCKMHYRTQ 245
               LL R    +  + P KC +C RGF    +  NH   H     PH+C  C   + T 
Sbjct: 137 NKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTK-PHRCKHCDNCFTTS 195

Query: 246 ----RHLRVHSVTAHERLYRCNKCGTISHTIKPTSYLTHKRKRHPSK-YICNLCGESFIG 300
               RH+R      HER ++C +C   S  ++ +    H R     K + C  C  +   
Sbjct: 196 GELIRHIRYRHT--HERPHKCTECDYAS--VELSKLKRHIRTHTGEKPFQCPHCTYASPD 251

Query: 301 AHGLLMHKTKAHKSSESNPEDGSPGEGFCAECDIRFTTLEAWKRHMICSINHRYDNS--L 358
              L  H  + H   +            C  C  RFT   + K H +    H+  N    
Sbjct: 252 KFKLTRHM-RIHTGEKPYS---------CDVCFARFTQSNSLKAHKMI---HQVGNKPVF 298

Query: 359 KCKICNIKYSSADSFTVHMKEHLKSLKRHRGPPGDTGQTKVACDQCGGSFANKSKLQAHI 418
           +CK+C           +H++        H      T    + C +C  +F ++   + H 
Sbjct: 299 QCKLCPTTCGRKTDLRIHVQN------LH------TADKPIKCKRCDSTFPDRYSYKMHA 346

Query: 419 NRMHLGIKYNKDIVCEVCGKKFSSNAFLRYHQRIHTGEKPYSCETCSRRFTEKNQLRIHV 478
            + H G K  +   CE C     S   L  H  +HT +KPY C+ C++ F +K  L+ H+
Sbjct: 347 -KTHEGEKCYR---CEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHM 402

Query: 479 RTHTG---------EKPYCCIVCGRSFSQKPALNRHYRVRGSRLPVVGCLEA 521
             +            K + C  C R F  K  L RH  +      V   +EA
Sbjct: 403 NYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMHDPESTVSKEMEA 454



 Score = 60.9 bits (141), Expect = 8e-11
 Identities = 29/95 (30%), Positives = 42/95 (44%)

Query: 432 VCEVCGKKFSSNAFLRYHQRIHTGEKPYSCETCSRRFTEKNQLRIHVRTHTGEKPYCCIV 491
           +C  C    +    L  H + H+ ++P+ C  C R F     L+ HV THTG KP+ C  
Sbjct: 128 MCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKH 187

Query: 492 CGRSFSQKPALNRHYRVRGSRLPVVGCLEACHVEI 526
           C   F+    L RH R R +      C E  +  +
Sbjct: 188 CDNCFTTSGELIRHIRYRHTHERPHKCTECDYASV 222


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 34.7 bits (76), Expect = 0.006
 Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 17/137 (12%)

Query: 246 RHLRVHSVTAHERLYRCNKCGTISHTIKPTSYLTHKRKRHPSKYICNLCGESFIGAHGLL 305
           + L   +   +  LYRC  CG +   ++ T++  H   + P++      G +   ++   
Sbjct: 278 QQLDTAAAPTNHHLYRCPACGNLF--VELTNFYNHSCTKAPAQD-----GVAVASSN--- 327

Query: 306 MHKTKAHKSSESNPEDGSPGEGF-CAECDIRFTTLEAWKRHMICSINHRYDNS---LKCK 361
            ++++  ++  S     S G+ F C  CD+ + T   +++H      HR  N    +KC 
Sbjct: 328 -NQSQPARTGGSAVTITSEGQRFQCNLCDMSYRTKLQYQKHEYEV--HRISNENFGIKCT 384

Query: 362 ICNIKYSSADSFTVHMK 378
           IC+  +S    + +HM+
Sbjct: 385 ICHKLFSQRQDYQLHMR 401



 Score = 33.1 bits (72), Expect = 0.019
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 401 CDQCGGSFANKSKLQAHINRMHLGIKYNKDIVCEVCGKKFSSNAFLRYHQR-IH 453
           C+ C  S+  K + Q H   +H     N  I C +C K FS     + H R IH
Sbjct: 351 CNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIH 404



 Score = 30.7 bits (66), Expect = 0.10
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 234 QCPVCKMHYRTQRHLRVHSVTAHERLYRCN---KCGTISHTI--KPTSYLTHKRKRHP 286
           QC +C M YRT+   + H    H R+   N   KC TI H +  +   Y  H R  HP
Sbjct: 350 QCNLCDMSYRTKLQYQKHEYEVH-RISNENFGIKC-TICHKLFSQRQDYQLHMRAIHP 405



 Score = 27.5 bits (58), Expect = 0.95
 Identities = 11/58 (18%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 204 FKCNLCFRGFVFEQAYVNHKMKHDQVNGPH---QCPVCKMHYRTQRHLRVHSVTAHER 258
           F+CNLC   +  +  Y  H+ +  +++  +   +C +C   +  ++  ++H    H +
Sbjct: 349 FQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIHPK 406


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 29.9 bits (64), Expect = 0.18
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 220 VNHKMKHDQVNGP--HQCPVCKMHYRTQRHLRVHSVTAHERL 259
           V+++  H  ++ P  H+CPVC   +  + +++ H    H  L
Sbjct: 908 VSNRWHHANIHRPQSHECPVCGQKFTRRDNMKAHCKVKHPEL 949



 Score = 27.9 bits (59), Expect = 0.72
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 4/47 (8%)

Query: 433 CEVCGKKFSSNAFLRYHQRIHTGEKPYSCETCSRRFTEKNQLRIHVR 479
           C  C K  S+     +H  IH  +  + C  C ++FT ++ ++ H +
Sbjct: 901 CVSCHKTVSNRW---HHANIHRPQS-HECPVCGQKFTRRDNMKAHCK 943


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 29.5 bits (63), Expect = 0.24
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 4/47 (8%)

Query: 433 CEVCGKKFSSNAFLRYHQRIHTGEKPYSCETCSRRFTEKNQLRIHVR 479
           C++CGK  +    +R H  +H   + + C  C   +T  + LR H +
Sbjct: 502 CKLCGKVVTH---IRNHYHVHFPGR-FECPLCRATYTRSDNLRTHCK 544



 Score = 27.5 bits (58), Expect = 0.95
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 220 VNHKMKHDQVNGP--HQCPVCKMHYRTQRHLRVHSVTAH 256
           V H   H  V+ P   +CP+C+  Y    +LR H    H
Sbjct: 509 VTHIRNHYHVHFPGRFECPLCRATYTRSDNLRTHCKFKH 547


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 27.9 bits (59), Expect = 0.72
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 8/68 (11%)

Query: 141 SIFKKDKEKQVPREMSECQKTN--------RRRSNKRTEQKIDSEEIKLSREEQMEALLK 192
           S F+  KEK VP     CQKT           R    T +K+   + K    EQ E L K
Sbjct: 31  SSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNKQKPITLEQGEKLAK 90

Query: 193 RSKSLNYI 200
             K++ Y+
Sbjct: 91  ELKAVKYV 98


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.72
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 144 KKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSREEQMEALLKRSK 195
           K+ +EK+  RE  E ++  R +  +  EQ+    E + +RE + E   +R +
Sbjct: 485 KEQREKE-QREKEERERQQREKEQREREQREKEREREAARERERERERERER 535


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 6/143 (4%)

Query: 55   LAELGRSGVQLTEQVIETNSHHESLLSQSKIETVEIQEVY-VKKEITEQNINEXXXXXXX 113
            LA + +S   +  ++    S  +++L Q+K+E++EI  +     +I +Q           
Sbjct: 915  LAAIHQSIANIESRIESMKSKRQTILMQAKMESIEIPLLQGSMDDIGQQEYAADGGSAYE 974

Query: 114  XXXXXXXXFNIDDGNNATDSEDDVPLKSIFKKDKEKQVPREMSECQKTNRRRSNKRTEQK 173
                    ++  + +    S+ D   KS     KE Q   +  E  +T     N +  QK
Sbjct: 975  RESRIEIDYSKLEHHLKNLSDPDQIKKSGDSLAKELQSKLDTLEKIQT----PNMKAMQK 1030

Query: 174  IDSEEIKL-SREEQMEALLKRSK 195
            +D    K+ S  E+ EA  K++K
Sbjct: 1031 LDRVTEKIQSTNEEFEAARKKAK 1053


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 6.7
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 364 NIKYSSADSFTVHMKEHLKSLKRHRGPPGDTGQTKVACDQCGGSFANKSKLQAHINRMHL 423
           N  Y + D+  VH KE  K LK+H G   D  +  +   +       KSK Q   N   L
Sbjct: 181 NSSYYTIDNKRVHFKEVSKLLKQH-GIDLDHNRFLILQGEVESIAMMKSKAQTE-NDCGL 238

Query: 424 GIKYNKDIV 432
            ++Y +DIV
Sbjct: 239 -LEYLEDIV 246



 Score = 24.6 bits (51), Expect = 6.7
 Identities = 12/48 (25%), Positives = 26/48 (54%)

Query: 145 KDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIKLSREEQMEALLK 192
           KDK   +  E+   Q   R+ +++RT+ + ++ +++   EE   A+ K
Sbjct: 934 KDKINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEK 981


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.133    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,070
Number of Sequences: 2123
Number of extensions: 23784
Number of successful extensions: 87
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 39
Number of HSP's gapped (non-prelim): 26
length of query: 533
length of database: 516,269
effective HSP length: 67
effective length of query: 466
effective length of database: 374,028
effective search space: 174297048
effective search space used: 174297048
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 50 (24.2 bits)