Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001735-TA|BGIBMGA001735-PA|IPR009818|Ataxin-2,
C-terminal
(377 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 33 0.050
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 33 0.066
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 29 1.1
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 29 1.4
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 28 1.9
SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1 |Schiz... 28 1.9
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 27 3.3
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 27 5.7
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 27 5.7
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 27 5.7
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 7.6
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 33.5 bits (73), Expect = 0.050
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 141 PTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLP-VQVQESRD 199
P P+ +L A S +T P+ E V + T T LP V
Sbjct: 698 PVEITEPPSSALVSATSPTTNVPIVPEAVHLSTAFSTAPVSTIVSNISPLPTVAPPNVSG 757
Query: 200 SPESCTVSSPDPEPIVEKTEVSL 222
SP +S P+ P+V +TE +L
Sbjct: 758 SPSETPISKPEKVPVVSQTEKAL 780
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 33.1 bits (72), Expect = 0.066
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 142 TTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLPVQVQESRDSP 201
T S +G +LE SR PL FVP++S+ P+ +K +T + V+ E+ S
Sbjct: 480 TGSRAGFVAALE---SRLQKGPLMRSFVPNKSKSPSGTKSPASGETSEAGVKETETTTSS 536
Query: 202 ES 203
ES
Sbjct: 537 ES 538
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 29.1 bits (62), Expect = 1.1
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 182 TTEEKTEQLPVQVQESRDSPESCTVSSPDPEPIVEKTEVSLXXXXXXXXXXXXXXXXSSV 241
TTE+ LP +V + VS+ D + + KTE L SSV
Sbjct: 708 TTEKPLSSLPEEVSRQPTDDKGEQVSNADVDSGLSKTE-RLTIQQTNEIKHVPTNTTSSV 766
Query: 242 EVPQEKAEKRPKE 254
++PQ+ + + KE
Sbjct: 767 KLPQQPSNEDEKE 779
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 28.7 bits (61), Expect = 1.4
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 125 QRERQNRPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTE 184
++ +++ P T+ KH P + + PT S+ + SR +A F+ S ++ E
Sbjct: 251 EQPKEHSPATS--KHEPEETPASPTPSVSASTSRERSTSVAPSFITSDQAATPDVLKSEE 308
Query: 185 EKTEQLPVQVQESRDSPESCTVSSP 209
E + E +P V SP
Sbjct: 309 AHVESFSKE-SEKDQTPIPEDVPSP 332
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 28.3 bits (60), Expect = 1.9
Identities = 25/98 (25%), Positives = 32/98 (32%), Gaps = 3/98 (3%)
Query: 157 SRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLPVQVQESRDSPESCTVSSPDPEPIVE 216
S+ T+ + VPS ++ EEK E + Q ES P EP V+
Sbjct: 398 SKGTVEKAVSATVPSAG---AQVQKHNEEKVETPKPEAQPVSKPKESAEEQKPSKEPEVK 454
Query: 217 KTEVSLXXXXXXXXXXXXXXXXSSVEVPQEKAEKRPKE 254
T S V Q K EK P E
Sbjct: 455 PTTPSASKVEEPSKKRDEDNHQKEETVTQPKREKTPVE 492
>SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 451
Score = 28.3 bits (60), Expect = 1.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 116 CIEAMLEDEQRERQNRPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLA 165
C + ED E ++ V +G YP N+ T+ + EAV S L +A
Sbjct: 229 CSMYVHEDADMELASKLVLDGKTDYPAACNAIETLLINEAVLSSHLPKIA 278
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 27.5 bits (58), Expect = 3.3
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 140 YPTTSNSGP-TISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLPVQVQESR 198
Y + NS P T ++ E S L+PL P+ ++T+ K+++ +ES+
Sbjct: 302 YSPSINSVPYTSNIVENPSEDNLSPLPP---PASGPYSQEEEETSLFKSQRKEENEEESK 358
Query: 199 DSPESCTVSSPDPEP 213
+ PE + D P
Sbjct: 359 ELPEDSDIYGKDSSP 373
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 26.6 bits (56), Expect = 5.7
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 126 RERQNRPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEE 185
+ER+ K +PT S P I+ + + L A+ ++ RLP S+ ++
Sbjct: 341 KERKRSVENEMLKPHPTIFESPPEITSFDKSNAVEAEALTAKLKSNEERLPVSSQPGSDA 400
Query: 186 KTEQ 189
K+++
Sbjct: 401 KSQE 404
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 177 THSKQTTEEKTEQLPVQVQESRDSPESCTVSSPDPEPIVEKT 218
THS + T + L V+ S+ P S ++P P P V T
Sbjct: 591 THSSRPTPNASSPLDVR---SKQKPSSANSNAPTPAPTVNTT 629
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 26.6 bits (56), Expect = 5.7
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 142 TTSNSGPTISLEEAVSRSTLNPLAAE---FVPSQSRLP---THSKQTTEEKTEQLPVQVQ 195
TTSN P+ S + ++ T PL A F SQ++ HS+ ++++ + + +
Sbjct: 261 TTSNHFPSNSAQSSLFSPTARPLTARKLGFASSQTKSAVSNNHSRNSSKDASFMMKSFIP 320
Query: 196 ESRDSPES 203
+R P++
Sbjct: 321 SNRSHPQT 328
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 26.2 bits (55), Expect = 7.6
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 135 NGHKHYPT-TSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSK 180
+ H H P+ SNSGPT SL S S+ + A S+ P+ +K
Sbjct: 376 SNHLHSPSPNSNSGPTDSLSAPNSTSSPSMAHANGASFASQYPSLNK 422
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.306 0.125 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,179,589
Number of Sequences: 5004
Number of extensions: 34938
Number of successful extensions: 89
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 85
Number of HSP's gapped (non-prelim): 13
length of query: 377
length of database: 2,362,478
effective HSP length: 74
effective length of query: 303
effective length of database: 1,992,182
effective search space: 603631146
effective search space used: 603631146
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 55 (26.2 bits)
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