Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001735-TA|BGIBMGA001735-PA|IPR009818|Ataxin-2,
C-terminal
(377 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5426| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 32 0.67
SB_8742| Best HMM Match : TPR_2 (HMM E-Value=0.00046) 32 0.67
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 32 0.88
SB_12895| Best HMM Match : C1_3 (HMM E-Value=0.03) 31 1.5
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 31 1.5
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_42496| Best HMM Match : rve (HMM E-Value=0.02) 30 2.7
SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24) 30 2.7
SB_45736| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_56596| Best HMM Match : Gal_Lectin (HMM E-Value=2.1e-12) 30 3.6
SB_28906| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.6
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 30 3.6
SB_45447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_31815| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0024) 29 4.7
SB_9411| Best HMM Match : Exo_endo_phos (HMM E-Value=0.19) 29 4.7
SB_57251| Best HMM Match : Lipase_GDSL (HMM E-Value=0.016) 29 4.7
SB_27107| Best HMM Match : MazG (HMM E-Value=2.9) 29 4.7
SB_50755| Best HMM Match : Uso1_p115_C (HMM E-Value=0.81) 29 6.2
SB_17758| Best HMM Match : Transformer (HMM E-Value=0.35) 29 6.2
SB_9903| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0051) 29 6.2
SB_44903| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_3036| Best HMM Match : Metallothionein (HMM E-Value=0.81) 29 6.2
SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20) 29 8.2
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.2
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.2
>SB_5426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 44.4 bits (100), Expect = 2e-04
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 87 FADYMWMENEEEFDKXXXXXXXXXXXXXXCIEAMLEDEQRERQNRPVT 134
F DYMWMEN E+FD+ CIE +LEDE+ ER+ T
Sbjct: 13 FEDYMWMENMEDFDRQIEEQLIEEEFIRNCIEQLLEDEE-ERETMSAT 59
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 32.3 bits (70), Expect = 0.67
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 117 IEAMLEDEQRERQN--RPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSR 174
+ + DEQ + N P N + + TT N+ + E + S + + L S+ +
Sbjct: 349 VTSQSHDEQTDSVNDHSPTANKNNNDDTTPNTALSDKCERSSSGNVIRKLDVVISTSKEK 408
Query: 175 LPTHSKQTTEEKTEQLPVQVQESRDS 200
+ + E QLP + QES +S
Sbjct: 409 YKQENPASQNETPAQLPAESQESANS 434
>SB_8742| Best HMM Match : TPR_2 (HMM E-Value=0.00046)
Length = 940
Score = 32.3 bits (70), Expect = 0.67
Identities = 22/89 (24%), Positives = 36/89 (40%)
Query: 128 RQNRPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKT 187
R+++ TN ++ G +S + S LNP + EF P L TT +
Sbjct: 565 RKSKSFTNDEANFLLDDQQGGHLSNSASPETSPLNPSSKEFYPRSLSLTNLDDGTTTLQP 624
Query: 188 EQLPVQVQESRDSPESCTVSSPDPEPIVE 216
LP V + + + + S + IVE
Sbjct: 625 PCLPTDVTSAENINMNIKIPSLHDDNIVE 653
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 31.9 bits (69), Expect = 0.88
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 138 KHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLPV----- 192
K PT + P + + V L P++AE + LP +K+ EEK + P+
Sbjct: 5891 KEKPTEREAKP-LDKKPLVEEKEL-PVSAEKAVEEKELPVSAKKAVEEKPLEKPITREEK 5948
Query: 193 QVQESRDSPESCTVSSPDP---EPIVEKTEV 220
+V+E + E T P +P+VE+ E+
Sbjct: 5949 KVEELKPKKEKATEREAKPREVKPLVEEKEL 5979
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 153 EEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLPV--------QVQESRDSPESC 204
E+A R P + + + LP + QT EEK + P+ +VQ ++ P
Sbjct: 5958 EKATEREA-KPREVKPLVEEKELPVSAGQTVEEKPLEKPIARKEKKVEEVQPKKEKPTER 6016
Query: 205 TVSSPDPEPIVEKTEVSL 222
+ +P+VE+ E+++
Sbjct: 6017 EAKPLEEKPLVEEKELAV 6034
>SB_12895| Best HMM Match : C1_3 (HMM E-Value=0.03)
Length = 1832
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 148 PTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLPVQVQESRDSP 201
P I+ +E +ST P+ FVP + L + +T + + +P++ E + P
Sbjct: 1282 PGITAQEDPPKSTSPPVPVNFVPDNAVLNLSTHETFHKSRKDIPIKKMEPCEQP 1335
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Query: 172 QSRLPTHSKQTTEEKTEQLPVQVQESRDSPESCTVSSPDPEPIVEKTEVSLXXXXXXXXX 231
++R P + E+ E L E +SP+ V +P E + EV
Sbjct: 2 EARTPAEETEAPVEEAEALGETPIEEAESPDK-KVEAPIEEAEAPEEEVEATVEEVEAPM 60
Query: 232 XXXXXXXSSVEVPQEKAEKRP 252
EVP EKAE +P
Sbjct: 61 EEAAASVEEAEVPIEKAETQP 81
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 134 TNGHKHYPTTSN--SGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQ-TTEEKTEQL 190
T P+T+ SGP++ ++ + + + +A+ S T +KQ TT++ T L
Sbjct: 138 TEATSRQPSTATQVSGPSLPMQHSTEHHSTSGVASPSTKQPSTALTTTKQPTTQQTTTNL 197
Query: 191 PVQVQESRDSPESCTVSSPDPEPIVEKTEVSL 222
P Q + + + T+ S ++T ++
Sbjct: 198 PSTRQPTTNQQTTTTLPSTKQPTTTQQTTTTI 229
>SB_42496| Best HMM Match : rve (HMM E-Value=0.02)
Length = 371
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 138 KHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLPVQVQES 197
+H+P N ++ + S T + L + S P T + E + +V
Sbjct: 48 RHFPGVDNLADLLTRGMSSSSLTESELWWKGPKLLSASPASWPSQTRNEDEIIATRVNRK 107
Query: 198 RDSPESCTVS-SPDPEPIVEKT 218
+SC + SP+PEP+++ T
Sbjct: 108 EKPIKSCFAAVSPEPEPVIDST 129
>SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24)
Length = 324
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 172 QSRLPTHSKQTTEEKTEQLPVQVQESRDSPESCTVSSPDPEPIVEKTEV 220
+ R P K+ +EK E+ P + + PE T P P EV
Sbjct: 78 KERKPREKKEKPKEKQEKKPKKASSEKKEPEEVTAKDQAPTPQASLEEV 126
>SB_45736| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 30.3 bits (65), Expect = 2.7
Identities = 25/130 (19%), Positives = 46/130 (35%)
Query: 92 WMENEEEFDKXXXXXXXXXXXXXXCIEAMLEDEQRERQNRPVTNGHKHYPTTSNSGPTIS 151
W + DK C+E L+ R+ + + + Y + ++
Sbjct: 134 WKKPMNVLDKMQACSVGPMSILYRCVEERLKLRVWTRRYKGLRSVLSGYLIAFDKHMNLA 193
Query: 152 LEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLPVQVQESRDSPESCTVSSPDP 211
L + TL + AE +P K+ ++K ++ P + E R + P
Sbjct: 194 LMDVDEVYTLEEITAEPLPEAEAKEVKQKKKKKKKNKKGPESLNECRKEESELLKAVAPP 253
Query: 212 EPIVEKTEVS 221
E V T+VS
Sbjct: 254 EKNVASTDVS 263
>SB_56596| Best HMM Match : Gal_Lectin (HMM E-Value=2.1e-12)
Length = 232
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 153 EEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLPVQVQESRDSPE 202
EEA ST N + P P K+ TE++TE +P +V++ ++ E
Sbjct: 24 EEAKPASTQNEELLQDAPEVDETP---KEMTEDETEDIPTEVEDDDENVE 70
>SB_28906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1191
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 170 PSQSRLPTHSKQTTEEKTEQLPVQVQESRDSPESCTVSSPDPE 212
P++ +PT KQ +++ +Q + Q S +PE+ SP P+
Sbjct: 379 PAKPAMPTTHKQQQQQQQQQQQQEKQPSEKAPENVPRMSPMPQ 421
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 29.9 bits (64), Expect = 3.6
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 142 TTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLPVQVQESRDSP 201
T+ +S P SLE+ S S L + P +LP +E +Q S P
Sbjct: 770 TSVSSSPESSLEQGTSSSQL---VTDRKPFSLQLPKQQNTQNDEPDNDSALQAMSSPSPP 826
Query: 202 ESCTVSSPDP 211
S ++SS P
Sbjct: 827 SSISLSSLHP 836
>SB_45447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 126 RERQNRPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEE 185
++R+NRP + S++GP + L ++V R N F PS+ + + T+E
Sbjct: 332 QQRENRPNQPSSAAQTSGSSNGPVLLLGDSVLRGINN---RRFCPSRFVNKQYVQGGTQE 388
Query: 186 KTEQLPVQVQESRDSPESCTVSS 208
E + +E ++ E V S
Sbjct: 389 MEEYIDSLTKEDKNDYECIVVHS 411
>SB_31815| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0024)
Length = 1163
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 126 RERQNRPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEE 185
++R+NRP + S++GP + L ++V R N F PS+ + + T+E
Sbjct: 455 QQRENRPNQPSSAAQTSGSSNGPVLLLGDSVLRGINN---RRFCPSRFVNKQYVQGGTQE 511
Query: 186 KTEQLPVQVQESRDSPESCTVSS 208
E + +E ++ E V S
Sbjct: 512 MEEYIDSLTKEDKNDYECIVVHS 534
>SB_9411| Best HMM Match : Exo_endo_phos (HMM E-Value=0.19)
Length = 891
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 126 RERQNRPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEE 185
++R+NRP + S++GP + L ++V R N F PS+ + + T+E
Sbjct: 328 QQRENRPNQPSSAAQTSGSSNGPVLLLGDSVLRGINN---RRFCPSRFVNKQYVQGGTQE 384
Query: 186 KTEQLPVQVQESRDSPESCTVSS 208
E + +E ++ E V S
Sbjct: 385 MEEYIDSLTKEDKNDYECIVVHS 407
>SB_57251| Best HMM Match : Lipase_GDSL (HMM E-Value=0.016)
Length = 280
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 126 RERQNRPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEE 185
++R+NRP + S++GP + L ++V R N F PS+ + + T+E
Sbjct: 99 QQRENRPNQPSSAAQTSGSSNGPVLLLGDSVLRGINN---RRFCPSRFVNKQYVQGGTQE 155
Query: 186 KTEQLPVQVQESRDSPESCTVSS 208
E + +E ++ E V S
Sbjct: 156 MEEYIDSLTKEDKNDYECIVVHS 178
>SB_27107| Best HMM Match : MazG (HMM E-Value=2.9)
Length = 229
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 126 RERQNRPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEE 185
++R+NRP + S++GP + L ++V R N F PS+ + + T+E
Sbjct: 99 QQRENRPNQPSSAAQTSGSSNGPVLLLGDSVLRGINN---RRFCPSRFVNKQYVQGGTQE 155
Query: 186 KTEQLPVQVQESRDSPESCTVSS 208
E + +E ++ E V S
Sbjct: 156 MKEYIDSLTKEDKNDYECIVVHS 178
>SB_50755| Best HMM Match : Uso1_p115_C (HMM E-Value=0.81)
Length = 205
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 128 RQNRPVTNGHKHYPTTSNSGP 148
R + P+TNGH+H PT ++ P
Sbjct: 173 RMDLPLTNGHEHEPTRADISP 193
>SB_17758| Best HMM Match : Transformer (HMM E-Value=0.35)
Length = 974
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/106 (20%), Positives = 42/106 (39%)
Query: 116 CIEAMLEDEQRERQNRPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRL 175
C+E L+ R+ + + + Y + ++L + TL + AE +P
Sbjct: 13 CVEERLKLRVWTRRYKGLRSVLSGYLIAFDKHMNLALMDVDEVYTLEEITAEPLPEAEAK 72
Query: 176 PTHSKQTTEEKTEQLPVQVQESRDSPESCTVSSPDPEPIVEKTEVS 221
K+ ++K ++ P + E R + PE V T+VS
Sbjct: 73 EVKQKKKKKKKNKKGPESLNECRKEESELLKAVAPPEKNVASTDVS 118
>SB_9903| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0051)
Length = 891
Score = 29.1 bits (62), Expect = 6.2
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 126 RERQNRPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEE 185
++R+NRP + S++GP + L ++V R N F PS+ + + T+E
Sbjct: 283 QQRENRPNQPSSAAQTSGSSNGPVLLLGDSVLRGINN---RRFCPSRFVNKQYVQGGTQE 339
Query: 186 KTEQLPVQVQESRDSPESCTVSS 208
E + +E ++ E V S
Sbjct: 340 MEEYIVSLTKEDKNDYECIVVHS 362
>SB_44903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 29.1 bits (62), Expect = 6.2
Identities = 20/95 (21%), Positives = 35/95 (36%)
Query: 122 EDEQRERQNRPVTNGHKHYPTTSNSGPTISLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQ 181
E ER V G + P T +S ++ S E V S + ++
Sbjct: 1082 ESVTHERDQVFVMQGTEQEPVTQDSNQEPVTQDLNQESVTQDSTQEPVTQDSNQESVTQD 1141
Query: 182 TTEEKTEQLPVQVQESRDSPESCTVSSPDPEPIVE 216
+T+E Q Q ++DS + + EP+ +
Sbjct: 1142 STQEPVTQDSTQEPVTQDSNQESVTQDSNQEPVAQ 1176
>SB_3036| Best HMM Match : Metallothionein (HMM E-Value=0.81)
Length = 597
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 155 AVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLPVQVQESRDSP 201
+V +T NPL A FVPS + P S T ++ S+ +P
Sbjct: 26 SVPSNTFNPLPASFVPSITFSPLSSSSTPSSTFSPFTIERLLSKQTP 72
>SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20)
Length = 1423
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 141 PTTSNSGPTI-SLEEAVSRSTLNPLAAEFVPSQSRLPTHSKQTTEEKTEQLPVQVQESR 198
P SN P S + + +S+L+P EFVP L +++TEE+ +Q P R
Sbjct: 262 PNASNFVPRQQSTRQPMPKSSLSPYVKEFVP----LSKMKQESTEEQIKQKPPDTSHIR 316
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 164 LAAEFVPSQSRLPTHSKQTTEEKTEQLPVQVQESRD 199
L +E +P S + +H+ EEK EQ+P +V E++D
Sbjct: 1870 LPSEDIPHGSDVSSHASDDEEEKEEQVP-RVGETKD 1904
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 28.7 bits (61), Expect = 8.2
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 142 TTSNSGPTISLEEAVSRSTLNPLAAEFVPSQ-SRLPTHSKQTTEEKTEQLPVQVQESRDS 200
T S S + ++ + T P P++ SR P S+ T E E+ V + S
Sbjct: 158 TPSQSSMSQEMDSMETEPTPPPKEMPPQPAEESRTPPGSRSTPEPSLEEPEVSAMGTPVS 217
Query: 201 PESCTVSSPDPEP 213
TV +P P P
Sbjct: 218 TPQATVQTPPPPP 230
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.306 0.125 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,684,470
Number of Sequences: 59808
Number of extensions: 250152
Number of successful extensions: 516
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 489
Number of HSP's gapped (non-prelim): 43
length of query: 377
length of database: 16,821,457
effective HSP length: 83
effective length of query: 294
effective length of database: 11,857,393
effective search space: 3486073542
effective search space used: 3486073542
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 61 (28.7 bits)
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