Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001734-TA|BGIBMGA001734-PA|IPR002744|Protein of unknown
function DUF59
         (154 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005023-1|AAH05023.1|  163|Homo sapiens family with sequence si...   190   2e-48
BC001733-1|AAH01733.1|  163|Homo sapiens family with sequence si...   190   2e-48
AF151886-1|AAD34123.1|  163|Homo sapiens CGI-128 protein protein.     190   2e-48
BC008865-1|AAH08865.1|  160|Homo sapiens family with sequence si...   119   4e-27
AK026528-1|BAB15496.1|  160|Homo sapiens protein ( Homo sapiens ...   119   4e-27
BC115026-1|AAI15027.1| 1339|Homo sapiens claspin homolog (Xenopu...    32   0.73 
BC115025-1|AAI15026.1| 1275|Homo sapiens CLSPN protein protein.        32   0.73 
BC113116-1|AAI13117.1| 1339|Homo sapiens claspin protein.              32   0.73 
AL354864-2|CAH73807.1| 1331|Homo sapiens claspin homolog (Xenopu...    32   0.73 
AF297866-1|AAG24515.1| 1332|Homo sapiens Hu-Claspin protein.           31   1.7  
BC130453-1|AAI30454.1| 1726|Homo sapiens ANKRD26 protein protein.      29   5.1  
AL162272-4|CAC19649.1| 1710|Homo sapiens novel protein protein.        29   5.1  
AK128577-1|BAC87508.1| 1080|Homo sapiens protein ( Homo sapiens ...    29   5.1  
AB028997-1|BAA83026.2| 1715|Homo sapiens KIAA1074 protein protein.     29   5.1  
BC041709-1|AAH41709.1|  639|Homo sapiens adult retina protein pr...    29   9.0  
AY139008-1|AAN28956.1|  639|Homo sapiens adult retina protein pr...    29   9.0  

>BC005023-1|AAH05023.1|  163|Homo sapiens family with sequence
           similarity 96, member B protein.
          Length = 163

 Score =  190 bits (463), Expect = 2e-48
 Identities = 88/130 (67%), Positives = 107/130 (82%)

Query: 6   DNINPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKN 65
           +N NP IY++  ER +T+ E DE + D  D REIFDLIR+INDPEHPLTLEEL VVE+  
Sbjct: 13  ENANPLIYQRSGERPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVR 72

Query: 66  IIVNNDDSTVLVNFTPTIPHCSMATLIGLSIRVQLLRALPSRFKVTVQVSEGSHASEHAV 125
           + V++ +STV V FTPTIPHCSMATLIGLSI+V+LLR+LP RFK+ V ++ G+HASEHAV
Sbjct: 73  VQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAV 132

Query: 126 NKQLADKERV 135
           NKQLADKERV
Sbjct: 133 NKQLADKERV 142


>BC001733-1|AAH01733.1|  163|Homo sapiens family with sequence
           similarity 96, member B protein.
          Length = 163

 Score =  190 bits (463), Expect = 2e-48
 Identities = 88/130 (67%), Positives = 107/130 (82%)

Query: 6   DNINPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKN 65
           +N NP IY++  ER +T+ E DE + D  D REIFDLIR+INDPEHPLTLEEL VVE+  
Sbjct: 13  ENANPLIYQRSGERPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVR 72

Query: 66  IIVNNDDSTVLVNFTPTIPHCSMATLIGLSIRVQLLRALPSRFKVTVQVSEGSHASEHAV 125
           + V++ +STV V FTPTIPHCSMATLIGLSI+V+LLR+LP RFK+ V ++ G+HASEHAV
Sbjct: 73  VQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAV 132

Query: 126 NKQLADKERV 135
           NKQLADKERV
Sbjct: 133 NKQLADKERV 142


>AF151886-1|AAD34123.1|  163|Homo sapiens CGI-128 protein protein.
          Length = 163

 Score =  190 bits (463), Expect = 2e-48
 Identities = 88/130 (67%), Positives = 107/130 (82%)

Query: 6   DNINPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKN 65
           +N NP IY++  ER +T+ E DE + D  D REIFDLIR+INDPEHPLTLEEL VVE+  
Sbjct: 13  ENANPLIYQRSGERPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVR 72

Query: 66  IIVNNDDSTVLVNFTPTIPHCSMATLIGLSIRVQLLRALPSRFKVTVQVSEGSHASEHAV 125
           + V++ +STV V FTPTIPHCSMATLIGLSI+V+LLR+LP RFK+ V ++ G+HASEHAV
Sbjct: 73  VQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAV 132

Query: 126 NKQLADKERV 135
           NKQLADKERV
Sbjct: 133 NKQLADKERV 142


>BC008865-1|AAH08865.1|  160|Homo sapiens family with sequence
           similarity 96, member A protein.
          Length = 160

 Score =  119 bits (287), Expect = 4e-27
 Identities = 55/101 (54%), Positives = 75/101 (74%), Gaps = 3/101 (2%)

Query: 38  EIFDLIRNINDPEHPLTLEELRVVEEKNIIV---NNDDSTVLVNFTPTIPHCSMATLIGL 94
           E++DLIR I DPE P TLEEL VV E  + V   N ++  V++ FTPT+PHCS+ATLIGL
Sbjct: 39  EVYDLIRTIRDPEKPNTLEELEVVSESCVEVQEINEEEYLVIIRFTPTVPHCSLATLIGL 98

Query: 95  SIRVQLLRALPSRFKVTVQVSEGSHASEHAVNKQLADKERV 135
            +RV+L R LP + K+ + +SEG+H++E  +NKQ+ DKERV
Sbjct: 99  CLRVKLQRCLPFKHKLEIYISEGTHSTEEDINKQINDKERV 139


>AK026528-1|BAB15496.1|  160|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22875 fis, clone KAT02879. ).
          Length = 160

 Score =  119 bits (287), Expect = 4e-27
 Identities = 55/101 (54%), Positives = 75/101 (74%), Gaps = 3/101 (2%)

Query: 38  EIFDLIRNINDPEHPLTLEELRVVEEKNIIV---NNDDSTVLVNFTPTIPHCSMATLIGL 94
           E++DLIR I DPE P TLEEL VV E  + V   N ++  V++ FTPT+PHCS+ATLIGL
Sbjct: 39  EVYDLIRTIRDPEKPNTLEELEVVSESCVEVQEINEEEYLVIIRFTPTVPHCSLATLIGL 98

Query: 95  SIRVQLLRALPSRFKVTVQVSEGSHASEHAVNKQLADKERV 135
            +RV+L R LP + K+ + +SEG+H++E  +NKQ+ DKERV
Sbjct: 99  CLRVKLQRCLPFKHKLEIYISEGTHSTEEDINKQINDKERV 139


>BC115026-1|AAI15027.1| 1339|Homo sapiens claspin homolog (Xenopus
           laevis) protein.
          Length = 1339

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 16/61 (26%), Positives = 32/61 (52%)

Query: 14  EKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDDS 73
           E+  E ++   E++E+L++E +  E  +   N    E  L+ EE+   +EK +   N+D 
Sbjct: 643 EEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAEFLLSSEEIETKDEKEMDKENNDG 702

Query: 74  T 74
           +
Sbjct: 703 S 703


>BC115025-1|AAI15026.1| 1275|Homo sapiens CLSPN protein protein.
          Length = 1275

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 16/61 (26%), Positives = 32/61 (52%)

Query: 14  EKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDDS 73
           E+  E ++   E++E+L++E +  E  +   N    E  L+ EE+   +EK +   N+D 
Sbjct: 579 EEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAEFLLSSEEIETKDEKEMDKENNDG 638

Query: 74  T 74
           +
Sbjct: 639 S 639


>BC113116-1|AAI13117.1| 1339|Homo sapiens claspin protein.
          Length = 1339

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 16/61 (26%), Positives = 32/61 (52%)

Query: 14  EKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDDS 73
           E+  E ++   E++E+L++E +  E  +   N    E  L+ EE+   +EK +   N+D 
Sbjct: 643 EEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAEFLLSSEEIETKDEKEMDKENNDG 702

Query: 74  T 74
           +
Sbjct: 703 S 703


>AL354864-2|CAH73807.1| 1331|Homo sapiens claspin homolog (Xenopus
           laevis) protein.
          Length = 1331

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 16/61 (26%), Positives = 32/61 (52%)

Query: 14  EKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDDS 73
           E+  E ++   E++E+L++E +  E  +   N    E  L+ EE+   +EK +   N+D 
Sbjct: 642 EEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAEFLLSSEEIETKDEKEMDKENNDG 701

Query: 74  T 74
           +
Sbjct: 702 S 702


>AF297866-1|AAG24515.1| 1332|Homo sapiens Hu-Claspin protein.
          Length = 1332

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 16/61 (26%), Positives = 31/61 (50%)

Query: 14  EKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDDS 73
           E+  E ++   E++E+L++E    E  +   N    E  L+ EE+   +EK +   N+D 
Sbjct: 643 EEDGEEKVEKEEKEEELEEEEGKEEEEEEEGNQETAEFLLSSEEIETKDEKEMDKENNDG 702

Query: 74  T 74
           +
Sbjct: 703 S 703


>BC130453-1|AAI30454.1| 1726|Homo sapiens ANKRD26 protein protein.
          Length = 1726

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 5/64 (7%)

Query: 3   KTADNINPHIYEKGSEREITSSERDEDLQDEFDDREI-FDLIRNINDPEHPLTLEELRVV 61
           K  ++ N H +E+  E+++  S ++  LQ+E     +  D I+N N  +     E+L++V
Sbjct: 910 KKMNSENSHSHEE--EKDL--SHKNSMLQEEIAMLRLEIDTIKNQNQEKEKKCFEDLKIV 965

Query: 62  EEKN 65
           +EKN
Sbjct: 966 KEKN 969


>AL162272-4|CAC19649.1| 1710|Homo sapiens novel protein protein.
          Length = 1710

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 5/64 (7%)

Query: 3   KTADNINPHIYEKGSEREITSSERDEDLQDEFDDREI-FDLIRNINDPEHPLTLEELRVV 61
           K  ++ N H +E+  E+++  S ++  LQ+E     +  D I+N N  +     E+L++V
Sbjct: 894 KKMNSENSHSHEE--EKDL--SHKNSMLQEEIAMLRLEIDTIKNQNQEKEKKCFEDLKIV 949

Query: 62  EEKN 65
           +EKN
Sbjct: 950 KEKN 953


>AK128577-1|BAC87508.1| 1080|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46736 fis, clone TRACH3020769, weakly  similar
           to Myosin heavy chain, nonmuscle type B. ).
          Length = 1080

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 5/64 (7%)

Query: 3   KTADNINPHIYEKGSEREITSSERDEDLQDEFDDREI-FDLIRNINDPEHPLTLEELRVV 61
           K  ++ N H +E+  E+++  S ++  LQ+E     +  D I+N N  +     E+L++V
Sbjct: 451 KKMNSENSHSHEE--EKDL--SHKNSMLQEEIAMLRLEIDTIKNQNQEKEKKCFEDLKIV 506

Query: 62  EEKN 65
           +EKN
Sbjct: 507 KEKN 510


>AB028997-1|BAA83026.2| 1715|Homo sapiens KIAA1074 protein protein.
          Length = 1715

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 5/64 (7%)

Query: 3   KTADNINPHIYEKGSEREITSSERDEDLQDEFDDREI-FDLIRNINDPEHPLTLEELRVV 61
           K  ++ N H +E+  E+++  S ++  LQ+E     +  D I+N N  +     E+L++V
Sbjct: 899 KKMNSENSHSHEE--EKDL--SHKNSMLQEEIAMLRLEIDTIKNQNQEKEKKCFEDLKIV 954

Query: 62  EEKN 65
           +EKN
Sbjct: 955 KEKN 958


>BC041709-1|AAH41709.1|  639|Homo sapiens adult retina protein
           protein.
          Length = 639

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/47 (25%), Positives = 31/47 (65%), Gaps = 1/47 (2%)

Query: 16  GSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPL-TLEELRVV 61
           GSE E++ +E +E+ +++++D +  D+    ++P +   ++E+L+ V
Sbjct: 374 GSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPGYENDSVEDLKEV 420


>AY139008-1|AAN28956.1|  639|Homo sapiens adult retina protein
           protein.
          Length = 639

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/47 (25%), Positives = 31/47 (65%), Gaps = 1/47 (2%)

Query: 16  GSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPL-TLEELRVV 61
           GSE E++ +E +E+ +++++D +  D+    ++P +   ++E+L+ V
Sbjct: 374 GSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPGYENDSVEDLKEV 420


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.314    0.132    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,846,784
Number of Sequences: 224733
Number of extensions: 683747
Number of successful extensions: 1827
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1813
Number of HSP's gapped (non-prelim): 18
length of query: 154
length of database: 73,234,838
effective HSP length: 84
effective length of query: 70
effective length of database: 54,357,266
effective search space: 3805008620
effective search space used: 3805008620
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)