Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001734-TA|BGIBMGA001734-PA|IPR002744|Protein of unknown
function DUF59
(154 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 121 2e-28
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 121 2e-28
03_06_0138 + 31940606-31940708,31940792-31940897,31941739-319418... 116 8e-27
07_03_1398 - 26271034-26271131,26271314-26271425,26271750-262717... 30 0.72
01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863... 30 0.72
01_01_1221 + 9873399-9873869,9873969-9874033,9874226-9874655,987... 30 0.95
12_01_0601 - 4907397-4907685,4908592-4909100 29 2.2
12_02_0779 + 23082577-23082903,23083347-23083543,23084346-230844... 28 2.9
01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242 28 3.8
10_01_0132 - 1601421-1601657,1601761-1601922,1602812-1603721,160... 27 5.1
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 27 5.1
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 27 6.7
05_05_0030 - 21698625-21698752,21699589-21699627,21699708-216998... 27 6.7
03_06_0146 - 31976538-31978643,31978653-31978751 27 6.7
12_01_0747 - 6724513-6724801,6725708-6726174 27 8.9
07_03_0584 - 19690474-19690589,19690763-19690909,19691068-196911... 27 8.9
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 27 8.9
04_03_0252 - 13517763-13517861,13518845-13519315,13519400-135196... 27 8.9
03_06_0193 + 32243458-32243556,32243566-32244273 27 8.9
01_06_0938 - 33179237-33179362,33179485-33179668,33180114-331804... 27 8.9
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 27 8.9
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 121 bits (292), Expect = 2e-28
Identities = 57/97 (58%), Positives = 76/97 (78%)
Query: 39 IFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDDSTVLVNFTPTIPHCSMATLIGLSIRV 98
+ D R+I DPEHP +LEEL VV E ++ +N++ S V V FTPT+ CSMAT+IGL +RV
Sbjct: 681 VADSKRDIKDPEHPYSLEELNVVTEDSVEINDELSHVRVTFTPTVERCSMATVIGLCLRV 740
Query: 99 QLLRALPSRFKVTVQVSEGSHASEHAVNKQLADKERV 135
+L+R+LP R+KV ++V+ GSHA+E AVNKQL DKERV
Sbjct: 741 KLMRSLPPRYKVDIRVAPGSHATETAVNKQLNDKERV 777
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 121 bits (292), Expect = 2e-28
Identities = 57/97 (58%), Positives = 76/97 (78%)
Query: 39 IFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDDSTVLVNFTPTIPHCSMATLIGLSIRV 98
+ D R+I DPEHP +LEEL VV E ++ +N++ S V V FTPT+ CSMAT+IGL +RV
Sbjct: 681 VADSKRDIKDPEHPYSLEELNVVTEDSVEINDELSHVRVTFTPTVERCSMATVIGLCLRV 740
Query: 99 QLLRALPSRFKVTVQVSEGSHASEHAVNKQLADKERV 135
+L+R+LP R+KV ++V+ GSHA+E AVNKQL DKERV
Sbjct: 741 KLMRSLPPRYKVDIRVAPGSHATETAVNKQLNDKERV 777
>03_06_0138 +
31940606-31940708,31940792-31940897,31941739-31941838,
31942913-31942958,31943580-31943689
Length = 154
Score = 116 bits (279), Expect = 8e-27
Identities = 50/104 (48%), Positives = 76/104 (73%)
Query: 32 DEFDDREIFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDDSTVLVNFTPTIPHCSMATL 91
D D ++FD +R+I DPEHP +LE+L V+ E+++ V+ + + FTPT+ HCSMAT+
Sbjct: 26 DAIDALDVFDTVRDIKDPEHPYSLEQLSVLSEESVSVDEKLGRIQITFTPTVQHCSMATV 85
Query: 92 IGLSIRVQLLRALPSRFKVTVQVSEGSHASEHAVNKQLADKERV 135
IGL +R++L++ P FK+ ++V+ GS A+E +VNKQL DKERV
Sbjct: 86 IGLCLRLKLMQNFPPHFKIDIKVAPGSLANEESVNKQLNDKERV 129
>07_03_1398 -
26271034-26271131,26271314-26271425,26271750-26271793,
26272158-26272485,26272569-26272982
Length = 331
Score = 30.3 bits (65), Expect = 0.72
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1 MTKTADNINPHI---YEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEE 57
+T+ + I+P + E+ E + SE + + +D+ D E F L+ N +D + L E
Sbjct: 166 VTRIENAIDPDVARLLEESGEPALAGSESESESEDD-DLEEDFVLVANQDDDDFVLVEIE 224
Query: 58 LRVVEEKNIIVNNDDS 73
+ EE+ I DDS
Sbjct: 225 NQFEEEEENIAAADDS 240
>01_06_1742 -
39585879-39585994,39586089-39586238,39586288-39586375,
39586479-39586640,39586753-39586877,39586992-39587030,
39587290-39587476,39587643-39587713,39589371-39589564,
39589656-39589767,39589899-39590082,39590177-39590503,
39590780-39591061,39591148-39591621,39591730-39591813,
39591850-39591939,39592024-39592247,39592503-39592600,
39592679-39593169,39593249-39593520,39594266-39594522,
39594672-39594890,39595007-39595167,39595249-39595441,
39595528-39595633,39595947-39596121,39596404-39596556,
39596663-39596794,39597120-39597184,39597754-39597819,
39598433-39598511,39598587-39598767,39598864-39598976
Length = 1889
Score = 30.3 bits (65), Expect = 0.72
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 49 PEH-PLTLEELRVVEEKNIIVNNDDSTVLVNFTPTIPHCSMATLIGLSIRVQLLRA 103
P H P L + +E N++ N + T +VN T H LI L + V++LR+
Sbjct: 905 PSHNPHNLLSSKFRDEGNVVENMSNGTPVVNKTSNRVHMPPELLIPLDLPVEILRS 960
>01_01_1221 +
9873399-9873869,9873969-9874033,9874226-9874655,
9874656-9874754,9874977-9875240
Length = 442
Score = 29.9 bits (64), Expect = 0.95
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 39 IFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDDSTVLVNFTPTIPHCSMATLIGLSIRV 98
IF + ++ +PE L+ + + +K I + D LV IPH +A L+ I
Sbjct: 363 IFPAVLDVENPEFKRKLDRMVEINKKIIAIGESDDIPLVKNLKRIPH--VAALVSEIIAA 420
Query: 99 QLLRALPS 106
L+ + S
Sbjct: 421 YLMPPIES 428
>12_01_0601 - 4907397-4907685,4908592-4909100
Length = 265
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 6/38 (15%)
Query: 14 EKGSEREITSSERDEDL------QDEFDDREIFDLIRN 45
E+G+ E+ SS+ DED+ QD +DD + DL+++
Sbjct: 207 EEGNSEEVKSSDDDEDMVIGGYTQDPYDDSGLEDLLQD 244
>12_02_0779 +
23082577-23082903,23083347-23083543,23084346-23084481,
23084558-23084794,23084885-23085108,23085434-23085551,
23086080-23086319,23086423-23086673,23088397-23088484,
23088576-23088727,23089670-23089811
Length = 703
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 2 TKTADNIN---PHIYEKGSEREITSSERDEDLQDEFDDRE 38
+K NIN ++ E+GS R I S+ + D +DE DD++
Sbjct: 267 SKDNQNINGGLANLAEEGSLRRIDSNAEESDGKDELDDQD 306
>01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242
Length = 417
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 47 NDPEHPLTLE---ELRVVEEKNIIVNNDDSTV-LVNFTPTIPH 85
N P H L+ ELRV KN++V +D + L+N +P H
Sbjct: 155 NWPSHKLSYSQPFELRVHPGKNVLVGEEDGALFLLNVSPAAEH 197
>10_01_0132 -
1601421-1601657,1601761-1601922,1602812-1603721,
1604587-1604651,1604704-1604746,1605086-1605128,
1605874-1605955,1606270-1606464,1606567-1606721,
1611207-1611435,1611538-1611693,1612539-1613476,
1614946-1614967
Length = 1078
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 64 KNIIVNNDDSTVLVNFTPTIPHCSMATLIGLSIRVQLLRALPSRFKVTVQVSEGSHASEH 123
K +I++N + + N + + P + TLI L R+ LL+ + S +V ++ + +
Sbjct: 236 KVLIIDNSEFSYDYNTSISTPSATSLTLIDLGGRLPLLKDMGSLVSASVYLTREAIPLDT 295
Query: 124 AVN 126
A+N
Sbjct: 296 AIN 298
>04_03_0961 +
21263735-21263773,21264157-21264279,21266774-21266847,
21266939-21267095,21267554-21267694,21267739-21267823,
21268810-21268903,21269041-21269239,21269515-21269549,
21270076-21270631,21270722-21270882,21271704-21271718,
21273078-21273330,21273439-21273562,21273688-21273788,
21274870-21274938,21275060-21275191,21275270-21275404,
21275489-21275551,21275636-21275881,21276007-21276285
Length = 1026
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 66 IIVNNDDSTVLVNFTPTIPHCSMATLIGLSIRVQ-LLRALPS 106
++ ++ +LV+ + +PH S+A +GL+I V L +AL S
Sbjct: 564 VMGKSEHGNLLVSLSDGLPHYSLAAAVGLAIGVAGLCKALHS 605
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 14 EKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPE 50
E E E + DED +DE DD E DL + +D E
Sbjct: 210 EDSDEEEEEDLDEDEDNEDEEDDDEHLDL-EDFDDEE 245
>05_05_0030 - 21698625-21698752,21699589-21699627,21699708-21699822,
21699927-21699992,21701064-21701203,21701424-21701473,
21701608-21702045,21702757-21702839,21702941-21702977,
21703366-21703457,21703531-21703615,21703950-21704029,
21704049-21704105,21704350-21704747,21706322-21707223,
21707331-21707421,21708123-21710273,21710375-21710813,
21711180-21711299
Length = 1836
Score = 27.1 bits (57), Expect = 6.7
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 5 ADNINPHIYEKGSEREITSSE-RDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEE 63
A+N NP I E S RE E + D++D +D + +I+ +N LE ++E
Sbjct: 1561 ANNTNPIIEEPASPREEECRELLENDIEDFDEDTDEIPIIK-LNMEAFSQNLE--NCIKE 1617
Query: 64 KNIIVNNDDST 74
N +DD T
Sbjct: 1618 SNKDFQSDDIT 1628
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 1 MTKTADNINPHIYEKGSEREITSSERDEDLQDEFD-DREIFD 41
++ A++ N H+ + E T+ +EDL DE D D E FD
Sbjct: 125 ISDVAESNNDHVDSNIAAAEDTTFSGEEDLDDETDGDIECFD 166
Score = 27.1 bits (57), Expect = 6.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 14 EKGSEREITSSERDEDLQDEFDDREIFD 41
E S+ + S++ + D ++E DD EI D
Sbjct: 226 ESDSDEDTESTDEESDYEEEIDDEEIDD 253
>12_01_0747 - 6724513-6724801,6725708-6726174
Length = 251
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 6/38 (15%)
Query: 14 EKGSEREITSSERDEDL------QDEFDDREIFDLIRN 45
E+G+ E+ SS+ DED+ Q+ +DD + DL+++
Sbjct: 193 EEGNSEEVKSSDYDEDMVIRGYAQNPYDDSGLEDLLQD 230
>07_03_0584 -
19690474-19690589,19690763-19690909,19691068-19691116,
19691240-19691365,19691473-19692651
Length = 538
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 4 TADNINPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVV 61
T D I P +E+ + +++ + D LQD D + ++R P + + LR++
Sbjct: 261 TLDMIVPGFFERSTMPGLSAGDDDAKLQDSNDHFDYVSVVREDFVPSIVVEEDALRII 318
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 9 NPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELR 59
NP EK ER+ S ++E +++ D+ + D PLT+E+LR
Sbjct: 764 NPESKEKEKERKENSENKEEKTENKQDNSKAEGGTEGTID-LRPLTMEDLR 813
>04_03_0252 -
13517763-13517861,13518845-13519315,13519400-13519679,
13519747-13519829
Length = 310
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 13 YEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVE 62
+E G +SSER + ++ I D + P P+ ++ELRV E
Sbjct: 177 HEYGHHHPSSSSERTKKVKRALSVSSISDALLAAAAPAPPVEIQELRVSE 226
>03_06_0193 + 32243458-32243556,32243566-32244273
Length = 268
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 1 MTKTADNINPHIYEKGSEREITSSERDEDLQDEF-DDREIFD 41
++ A+ N H+ + E T+ +EDL DE DD E FD
Sbjct: 125 ISDVAERNNDHVDSNIAAAEDTTFSGEEDLDDETNDDIECFD 166
>01_06_0938 -
33179237-33179362,33179485-33179668,33180114-33180409,
33180702-33180821,33180931-33181018,33181352-33181426,
33181565-33181632,33181770-33181852,33182010-33182058,
33183006-33183126,33183225-33183310,33183782-33183910,
33184033-33184155,33184277-33184486,33185217-33185240
Length = 593
Score = 26.6 bits (56), Expect = 8.9
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 20 EITSSERDEDLQDEF-DDREIFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDDSTVLVN 78
E +SS D D D+F ++R+ F + + L + LR++ +N ++ N ++LV+
Sbjct: 463 ESSSSSDDTDDDDDFAEERKNFGAALSFRHFDGLLVHDCLRIIFAENYLLQNLFDSLLVD 522
Query: 79 F 79
F
Sbjct: 523 F 523
>01_06_0213 +
27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 12 IYEKGSEREITSSERDEDLQ--DEFDDREIFDLIRNINDPEHPL 53
I + +E+E +ERDED + D DD + D+ ++ D + PL
Sbjct: 630 ISDSEAEKEANDAERDEDSECDDADDDPDGDDVNIDVGDGKDPL 673
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.132 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,627,680
Number of Sequences: 37544
Number of extensions: 137630
Number of successful extensions: 387
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 373
Number of HSP's gapped (non-prelim): 24
length of query: 154
length of database: 14,793,348
effective HSP length: 76
effective length of query: 78
effective length of database: 11,940,004
effective search space: 931320312
effective search space used: 931320312
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)
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