Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001734-TA|BGIBMGA001734-PA|IPR002744|Protein of unknown
function DUF59
(154 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g68310.1 68414.m07803 expressed protein contains Pfam profile... 144 2e-35
At3g09380.1 68416.m01113 hypothetical protein contains Pfam prof... 119 1e-27
At5g62310.1 68418.m07822 incomplete root hair elongation (IRE) /... 31 0.46
At2g26890.1 68415.m03226 DNAJ heat shock N-terminal domain-conta... 30 0.80
At1g73450.1 68414.m08503 protein kinase, putative similar to nuc... 29 1.1
At1g03530.1 68414.m00334 expressed protein similar to hypothetic... 29 1.1
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 29 1.8
At1g13670.1 68414.m01607 expressed protein 29 1.8
At3g06130.1 68416.m00704 heavy-metal-associated domain-containin... 28 2.4
At2g44510.1 68415.m05534 p21Cip1-binding protein-related similar... 28 3.2
At2g30400.1 68415.m03702 ovate family protein 57% similar to ova... 27 4.3
At2g03470.2 68415.m00306 myb family transcription factor / ELM2 ... 27 4.3
At2g03470.1 68415.m00305 myb family transcription factor / ELM2 ... 27 4.3
At5g55200.1 68418.m06881 co-chaperone grpE protein, putative sim... 27 5.6
At5g10660.1 68418.m01234 calmodulin-binding protein-related cont... 27 5.6
At4g39630.1 68417.m05601 expressed protein 27 5.6
At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containi... 27 5.6
At4g30480.1 68417.m04327 tetratricopeptide repeat (TPR)-containi... 27 5.6
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 27 7.4
At3g56430.1 68416.m06276 expressed protein unknown protein At2g4... 27 7.4
At1g21600.1 68414.m02700 expressed protein similar to hypothetic... 27 7.4
At1g17130.1 68414.m02087 cell cycle control protein-related cont... 27 7.4
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 26 9.8
At2g18220.1 68415.m02123 expressed protein contains Pfam domain ... 26 9.8
>At1g68310.1 68414.m07803 expressed protein contains Pfam profile
PF01883: Domain of unknown function
Length = 159
Score = 144 bits (350), Expect = 2e-35
Identities = 73/132 (55%), Positives = 97/132 (73%), Gaps = 3/132 (2%)
Query: 7 NINPHIYEKGSEREITSSERDEDLQDE-FDDREIFDLIR--NINDPEHPLTLEELRVVEE 63
N NP IY K R T + ++L E D EIFD++ NI DPEHP TLE+LRVV E
Sbjct: 7 NENPIIYPKKERRLRTDTSITDELTPEPIDQLEIFDILSSSNIKDPEHPNTLEDLRVVTE 66
Query: 64 KNIIVNNDDSTVLVNFTPTIPHCSMATLIGLSIRVQLLRALPSRFKVTVQVSEGSHASEH 123
++ V++++S V V FTPT+ HCSMAT+IGL +RV+LLR+LPSR+K+ ++V+ GSHA+E
Sbjct: 67 DSVEVDDENSYVRVTFTPTVEHCSMATVIGLCVRVKLLRSLPSRYKIDIRVAPGSHATED 126
Query: 124 AVNKQLADKERV 135
A+NKQL DKERV
Sbjct: 127 ALNKQLNDKERV 138
>At3g09380.1 68416.m01113 hypothetical protein contains Pfam profile
PF01883: Domain of unknown function
Length = 156
Score = 119 bits (286), Expect = 1e-27
Identities = 66/136 (48%), Positives = 88/136 (64%), Gaps = 8/136 (5%)
Query: 1 MTKTADNINPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHP-LTLEELR 59
M N NP IY K + R T D+ DEF + IR+I DPEHP L+LE+L
Sbjct: 8 MDSVLTNKNPIIYPKRTRRYRT----DQSSTDEFSST---NRIRDIKDPEHPELSLEDLN 60
Query: 60 VVEEKNIIVNNDDSTVLVNFTPTIPHCSMATLIGLSIRVQLLRALPSRFKVTVQVSEGSH 119
V+ E+++ V++ S V + FTPT+PHC + T IGL I V+L+++LP+RFKV V+V+ GSH
Sbjct: 61 VLTEESVEVDDHKSYVRITFTPTLPHCHLPTHIGLCILVKLVQSLPARFKVDVRVAPGSH 120
Query: 120 ASEHAVNKQLADKERV 135
E VNKQL DKERV
Sbjct: 121 DKETTVNKQLGDKERV 136
>At5g62310.1 68418.m07822 incomplete root hair elongation (IRE) /
protein kinase, putative nearly identical to IRE
(incomplete root hair elongation) [Arabidopsis thaliana]
gi|6729346|dbj|BAA89783
Length = 1168
Score = 30.7 bits (66), Expect = 0.46
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 21 ITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDDSTV--LVN 78
+++S R EDL DE R D++ + ++ +L+EL ++ E ++ DS+ L
Sbjct: 555 LSNSSRQEDL-DEISQRCSDDMLDCVPRSQNTFSLDELNILNEMSMTNGTKDSSAGSLTP 613
Query: 79 FTPTIPHCSMATLI 92
+P P S L+
Sbjct: 614 PSPATPRNSQVDLL 627
>At2g26890.1 68415.m03226 DNAJ heat shock N-terminal domain-containing
protein contains Pfam profile PF00226: DnaJ domain
Length = 2554
Score = 29.9 bits (64), Expect = 0.80
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 51 HPLTLEELRVVEEKNIIVNNDDSTVLVNFTPTIP-HCSMATLIGLSI----RVQLLRALP 105
+P+ L+ + V ++ N ++ND S +LV + + C+ ++L G + VQLL L
Sbjct: 1617 YPMLLDAVTVDKDDNNFLSNDRSPLLVAASELVSLTCAASSLNGEELVRDGGVQLLSTLL 1676
Query: 106 SRFKVTVQVSEGSH 119
SR VQ + H
Sbjct: 1677 SRCMCVVQPTTSQH 1690
>At1g73450.1 68414.m08503 protein kinase, putative similar to
nuclear serine/threonine protein kinase GI:3582644 from
[Rattus norvegicus]
Length = 1152
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 15 KGSEREITSSERDEDLQDEFDDRE---IFDLIRNINDPEHPLTLEELRVVEEKN 65
K +E+E SSER++ DD E + + +R I E +L++V KN
Sbjct: 766 KHAEKENDSSEREDGHATALDDEEAVAVQEQVRQIKAQEEEFETFDLKIVHRKN 819
>At1g03530.1 68414.m00334 expressed protein similar to hypothetical
protein GB:O14360
Length = 797
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 5 ADNINPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEK 64
A ++ ++ E+ + +I + D+D D+ DD ++ +++ ND + L L+ + K
Sbjct: 297 AGDLKRNLDEENGDDDIEDEDDDDD-DDDDDDDDVNEMVAWSNDEDDDLGLQTKEPIRSK 355
Query: 65 N 65
N
Sbjct: 356 N 356
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 1 MTKTADNINPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRV 60
M+K+ DN+ Y +R + ER++ ++ + D N+ P L+E RV
Sbjct: 546 MSKSVDNVLDEKYPAYKDRHKLAVEREKHIKHKADQARAERFGGNVALPPKLAQLKEKRV 605
Query: 61 VEEKNIIVNNDDS 73
V I D S
Sbjct: 606 VVPSVITATGDQS 618
>At1g13670.1 68414.m01607 expressed protein
Length = 225
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 17 SEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRV-VEEKNIIVNNDDSTV 75
SE +I R+ ++ E D +F+ R +D P T+E R+ +++++I+ N V
Sbjct: 11 SEDKIHKPNRERNVSGELD---VFEATRYFSDFNEPTTIEYSRIQIQKQSIVTENRQKRV 67
>At3g06130.1 68416.m00704 heavy-metal-associated domain-containing
protein contains Pfam heavy metal associated domain
PF00403
Length = 473
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 8 INPHIYEKGSEREITSSERDEDLQDEFDD 36
+N + +KG + ++ + D+D DEFDD
Sbjct: 173 VNKNQNQKGVKFDVPEDDDDDDFSDEFDD 201
>At2g44510.1 68415.m05534 p21Cip1-binding protein-related similar
to p21Cip1-binding protein TOK-1beta (GI:7339688) [Homo
sapiens]; similar to BRCA2 and Cip1/p21 interacting
protein (GI:25989375) [Homo sapiens]
Length = 326
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 10 PHIYEKGSEREITSSERDEDLQDEFD-DREIFD 41
P++ KG E +++ S +ED Q++ D E FD
Sbjct: 58 PNLPRKGKEEQVSDSSDEEDSQEDVQADFEFFD 90
>At2g30400.1 68415.m03702 ovate family protein 57% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 320
Score = 27.5 bits (58), Expect = 4.3
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 9 NPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKNIIV 68
+P I G+ R ++S R E QD E F +++ DP+ + ++EE NI
Sbjct: 228 SPRIQLSGTRR--STSRRSESKQDVL---ESFAVMKRSVDPKKDFRESMIEMIEENNIRA 282
Query: 69 NNDDSTVLVNFTPTIP 84
+ D +L + P
Sbjct: 283 SKDLEDLLACYLTLNP 298
>At2g03470.2 68415.m00306 myb family transcription factor / ELM2
domain-containing protein contains Pfam profile: PF00249
Myb-like DNA-binding domain; contains Pfam profile:
PF01448 ELM2 domain
Length = 449
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 6 DNINPHIYEKGSEREITSSERDEDLQDEFDD 36
+N N YE E E TSS D++ ++E DD
Sbjct: 314 NNGNRSSYEDNEEEEETSSNDDDEEEEEEDD 344
>At2g03470.1 68415.m00305 myb family transcription factor / ELM2
domain-containing protein contains Pfam profile: PF00249
Myb-like DNA-binding domain; contains Pfam profile:
PF01448 ELM2 domain
Length = 450
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 6 DNINPHIYEKGSEREITSSERDEDLQDEFDD 36
+N N YE E E TSS D++ ++E DD
Sbjct: 315 NNGNRSSYEDNEEEEETSSNDDDEEEEEEDD 345
>At5g55200.1 68418.m06881 co-chaperone grpE protein, putative
similar to chaperone GrpE type 2 [Nicotiana tabacum]
GI:3851640; contains Pfam profile PF01025: co-chaperone
GrpE
Length = 302
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 9 NPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKN 65
N + + G E + D + +FDD DL++ +++ E L +++ ++E K+
Sbjct: 86 NTEVPKTGETSENVEVGKATDAEIDFDDLSRDDLVKLVSEKEDLLKVQQKDIMEMKD 142
>At5g10660.1 68418.m01234 calmodulin-binding protein-related
contains weak similarity to calmodulin-binding proteins
Length = 407
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 20 EITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKNIIVNNDD 72
E +SE +E+++ + DD E + + D + +EE + E++ V ++
Sbjct: 279 EENNSEEEEEVKKKSDDEENSETVATTTDMNEAVNVEESKEEEKEEAEVKEEE 331
>At4g39630.1 68417.m05601 expressed protein
Length = 233
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 14 EKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVV 61
++ E+ I E+ ED DE +R+I IR I D E L LR++
Sbjct: 16 DRNDEKRIRIEEKKEDFVDEEVERQI-AAIRAIRDVEIEQMLTALRLL 62
>At4g30480.2 68417.m04328 tetratricopeptide repeat
(TPR)-containing protein similar to SP|Q99614
Tetratricopeptide repeat protein 1 {Homo sapiens};
contains Pfam profile PF00515: TPR Domain
Length = 277
Score = 27.1 bits (57), Expect = 5.6
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 2 TKTADNINPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEE-LRV 60
TK D + +E SEREI+ E +ED D + + +P+H EE + +
Sbjct: 32 TKQVDGDDSDGFETASEREISDEEGEEDGTKN-------DAVTSQEEPQHSEKKEEQIEL 84
Query: 61 VEEKNIIVNN 70
+ E IV++
Sbjct: 85 MSEGEAIVDD 94
>At4g30480.1 68417.m04327 tetratricopeptide repeat
(TPR)-containing protein similar to SP|Q99614
Tetratricopeptide repeat protein 1 {Homo sapiens};
contains Pfam profile PF00515: TPR Domain
Length = 208
Score = 27.1 bits (57), Expect = 5.6
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 2 TKTADNINPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEE-LRV 60
TK D + +E SEREI+ E +ED D + + +P+H EE + +
Sbjct: 32 TKQVDGDDSDGFETASEREISDEEGEEDGTKN-------DAVTSQEEPQHSEKKEEQIEL 84
Query: 61 VEEKNIIVNN 70
+ E IV++
Sbjct: 85 MSEGEAIVDD 94
>At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger)
family protein contains similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 486
Score = 26.6 bits (56), Expect = 7.4
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 6 DNINPHIYEKGSEREITSSERDEDLQDEFDDREIFDLIRNINDPEHPLTLEELRVVEEKN 65
D NP + E++ T E++ D + + D+ E + ND E ++ EE+
Sbjct: 22 DRFNPEATQDLQEKDETKEEKEGDEEVKHDEAEEDQEVVKPNDAEEDDDGDDAEEDEEEE 81
Query: 66 IIVNNDD 72
+ D+
Sbjct: 82 VEAEEDE 88
>At3g56430.1 68416.m06276 expressed protein unknown protein
At2g40800 - Arabidopsis thaliana, EMBL:AC007660
Length = 434
Score = 26.6 bits (56), Expect = 7.4
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Query: 2 TKTADNINPHIYEKGSEREITSSERDE----DLQD-EFDDREIFDL 42
TK DN++ E+ +ERE+ +ER E +LQ+ E +RE F+L
Sbjct: 373 TKEFDNLDRIEEEEDAERELQEAERKEREEIELQEAERKEREEFEL 418
>At1g21600.1 68414.m02700 expressed protein similar to hypothetical
protein GB:AAD41412 GI:5263310 from [Arabidopsis
thaliana]
Length = 328
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 44 RNINDPEHPLTLEELRVVEEK 64
R NDPE L LEE+ V++ K
Sbjct: 230 RRTNDPEFVLDLEEIYVIDSK 250
>At1g17130.1 68414.m02087 cell cycle control protein-related
contains similarity to Swiss-Prot:Q9P7C5 cell cycle
control protein cwf16 [Schizosaccharomyces pombe]
Length = 331
Score = 26.6 bits (56), Expect = 7.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 16 GSEREITSSERDEDLQDEFDDREIFD 41
G ++E+ DE++ D++DD +I D
Sbjct: 200 GKQKEVIRRIADEEIDDDYDDDDIDD 225
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 6 DNINPHIYEKGSEREITSSERDEDLQDEFDDRE 38
D + +K S+RE +S ERD +D+ DRE
Sbjct: 91 DKVREGSRDKESDRERSSKERDRSDRDKPRDRE 123
>At2g18220.1 68415.m02123 expressed protein contains Pfam domain
PF03715: Uncharacterised protein family (UPF0120)
Length = 779
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 21 ITSSERDEDLQDEFDDREIFDLIRNINDPE 50
++S E +EDL D D++ D + I DPE
Sbjct: 720 LSSDEEEEDLFDIGGDKDEDDAVDEIADPE 749
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.132 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,111,322
Number of Sequences: 28952
Number of extensions: 125195
Number of successful extensions: 427
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 409
Number of HSP's gapped (non-prelim): 26
length of query: 154
length of database: 12,070,560
effective HSP length: 75
effective length of query: 79
effective length of database: 9,899,160
effective search space: 782033640
effective search space used: 782033640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 55 (26.2 bits)
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