GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001733-TA|BGIBMGA001733-PA|undefined
         (185 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   2.6  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   6.1  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   6.1  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 94  SIENKRRLVSALSACLDPEG 113
           SI N RR+V+  +ACL  +G
Sbjct: 32  SILNNRRMVNYYAACLLSKG 51


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 89  TRVRNSIENKRRLVSALSACLDPEG 113
           T +R  I+NKR   + L A  DP G
Sbjct: 86  TIIRYLIKNKRDWWNELEAKYDPTG 110


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 89  TRVRNSIENKRRLVSALSACLDPEG 113
           T +R  I+NKR   + L A  DP G
Sbjct: 86  TIIRYLIKNKRDWWNELEAKYDPTG 110


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.132    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,143
Number of Sequences: 317
Number of extensions: 1855
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 185
length of database: 114,650
effective HSP length: 53
effective length of query: 132
effective length of database: 97,849
effective search space: 12916068
effective search space used: 12916068
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)