Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001733-TA|BGIBMGA001733-PA|undefined
(185 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 28 0.73
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 26 2.9
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 26 2.9
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 26 2.9
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 25 5.1
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 25 6.8
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 25 6.8
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 25 6.8
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 25 9.0
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 28.3 bits (60), Expect = 0.73
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 150 YKVDDVIGEKDSQSYNYIKKFVE 172
Y VD V+ + ++Q+Y ++KKF E
Sbjct: 67 YPVDGVVPKHETQAYEFLKKFPE 89
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 26.2 bits (55), Expect = 2.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 136 VYNNKIHQVMITPPYKVDDVIGEKDSQSYNYI-KKFVER 173
VY N Q I P K++D+ S YI KKFV++
Sbjct: 652 VYKNVCSQAGINPSTKLEDLDEHTLSDELTYITKKFVQK 690
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 26.2 bits (55), Expect = 2.9
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 33 DPQTKMLILKCQSSSGNPKRHDVNIVNLSLVSDVQIKKEVSTVPEPPQSLNLHRLNTRVR 92
+P T + + C+ SG+ + + L L ++ + VST P SLN R N+ V+
Sbjct: 513 EPVTSVALGDCEVVSGS----EDGKIYLWLFNNAPNESPVSTQSVPISSLNGQRSNSSVQ 568
Query: 93 NSIENKRRLVSALS 106
++ + S+LS
Sbjct: 569 RALSSVPNYSSSLS 582
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 26.2 bits (55), Expect = 2.9
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 22 NENIEGEVLAFDPQTKMLILKCQSSSGNPKRHDVNIVNLSLVS-DVQIKKEVSTVPEPP 79
N IE A D K +L + S K H+ + L S D Q + V+T PEPP
Sbjct: 260 NSMIETSANA-DITPKASLLPSTTESSISKDHETSQAPLGSESVDTQASENVTTKPEPP 317
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/61 (21%), Positives = 28/61 (45%)
Query: 20 CYNENIEGEVLAFDPQTKMLILKCQSSSGNPKRHDVNIVNLSLVSDVQIKKEVSTVPEPP 79
C+ I G+++ F T+ K + + KR+ +++ N + + + E + P P
Sbjct: 818 CFAILIPGQLVFFQDATRTKFGKLCTKTHYRKRYSISLKNAFIYTGLSTMDEFARGPNDP 877
Query: 80 Q 80
Q
Sbjct: 878 Q 878
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 25.0 bits (52), Expect = 6.8
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 49 NPKRHDVNIVNLSLVS-DVQIKKEVSTVPEPPQSLNLHRLNTRVRNSIENKRRLVSAL 105
N +R N+ N +S D IK ST + P SL LNT V +S R+ +S++
Sbjct: 244 NRRRTKDNLTNNPEISLDEPIKALPSTTSDAPSSL----LNTNVSSSPSKFRKFLSSV 297
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 82 LNLHRLNTRVRNSIENKRRLVSALSACLDPEGQRLFMAI 120
L H +NT + + +R +S SACL+ + + F A+
Sbjct: 8 LQYHGVNTSLSRHLFLAKRNLSISSACLEAKNSQKFPAL 46
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 25.0 bits (52), Expect = 6.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 68 IKKEVSTVPEPPQSLNLHRLN-TRVRNSIENKRRLVSALSACLDPEGQRLFMAI 120
+KK + +P+P + L L T + E +R V L+ CL P+G R M +
Sbjct: 920 LKKFLRELPDPLLTFKLFGLFITSSKLESEEERMRVLHLTICLLPKGHRDTMEV 973
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 49 NPKRHDVNIVNLSLVSDVQIKKEVSTVPEPPQSLNLHRL 87
N +R + +LS +S +KEV T E P+ N+ R+
Sbjct: 46 NRRRSSYSASSLSSLSSKPTEKEVPTRNEKPKHANIMRV 84
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.132 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 872,625
Number of Sequences: 5004
Number of extensions: 34214
Number of successful extensions: 95
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 91
Number of HSP's gapped (non-prelim): 9
length of query: 185
length of database: 2,362,478
effective HSP length: 69
effective length of query: 116
effective length of database: 2,017,202
effective search space: 233995432
effective search space used: 233995432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)
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