GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001733-TA|BGIBMGA001733-PA|undefined
         (185 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   1.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.5  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 112 EGQRLFMAIARVIDDVSWAGQSIRVY 137
           +G+RL+  IA + DDVS     +R+Y
Sbjct: 157 KGRRLWFGIANIEDDVSVLMAELRLY 182


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 15   VATRTCYNENIEGEVLAFDPQTKMLILKCQSSSGN 49
            VA R  YN +++   L+F    +   L C + S N
Sbjct: 1598 VALRFVYNTSVDDSKLSFSWNGQEFNLFCSTGSSN 1632


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.132    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,765
Number of Sequences: 2123
Number of extensions: 6447
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 2
length of query: 185
length of database: 516,269
effective HSP length: 60
effective length of query: 125
effective length of database: 388,889
effective search space: 48611125
effective search space used: 48611125
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)