Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001733-TA|BGIBMGA001733-PA|undefined
(185 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73428-5|CAA97808.2| 209|Caenorhabditis elegans Hypothetical pr... 45 4e-05
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 30 0.87
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 30 0.87
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 30 0.87
U13876-16|AAW88394.1| 420|Caenorhabditis elegans Proteasome reg... 29 2.7
U13876-15|AAA21173.2| 438|Caenorhabditis elegans Proteasome reg... 29 2.7
Z92790-4|CAB07227.2| 227|Caenorhabditis elegans Hypothetical pr... 28 3.5
U61949-4|AAB03150.2| 414|Caenorhabditis elegans Hypothetical pr... 28 4.6
U49947-7|AAA93425.2| 382|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical p... 27 8.1
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 27 8.1
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z73428-5|CAA97808.2| 209|Caenorhabditis elegans Hypothetical
protein M142.5 protein.
Length = 209
Score = 44.8 bits (101), Expect = 4e-05
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 12/163 (7%)
Query: 11 IGSIVATRTCYNENIEGEVLAFDPQTKMLILKCQSSSGNPKR----HDVNIVNLSLVSDV 66
IG+ V T + G V++FD K+L+L + + N + ++ N+ ++S+
Sbjct: 13 IGACVEIETTNGLSARGVVISFDTTRKVLVLDTKEMAINKPMIRIFNSEHLKNIKVLSEA 72
Query: 67 QIKKEVSTVPEPPQSLNLHRLN-TRVRNSIENKR-RLVSAL--SACLDPEGQRLFMAIAR 122
+ E + Q + +N TR ++ L L S + GQ+ ++ + R
Sbjct: 73 LEESEKFARAKTEQFAQNNPVNGTRTTERLDKTLGELTPNLMKSPAISIRGQQAYLQLKR 132
Query: 123 VIDDVSWAGQSIRVYNNKIHQVMITPPYKVDDVIGEKDSQSYN 165
I D W G+ IRV + V++ PY+V DV + + ++
Sbjct: 133 TIPDTCWCGEDIRV----LGLVLVHKPYEVSDVTKDAKATGFD 171
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 76 PEPPQSLNLHRLNTRVRNSIENKRRLVSALSACLDPEGQRLF 117
P+ PQ L+ H + +N I + SA S+C P+G F
Sbjct: 85 PQQPQLLHHHNNHLGYQNGIHQITSINSAASSCSSPDGDSAF 126
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 76 PEPPQSLNLHRLNTRVRNSIENKRRLVSALSACLDPEGQRLF 117
P+ PQ L+ H + +N I + SA S+C P+G F
Sbjct: 102 PQQPQLLHHHNNHLGYQNGIHQITSINSAASSCSSPDGDSAF 143
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 76 PEPPQSLNLHRLNTRVRNSIENKRRLVSALSACLDPEGQRLF 117
P+ PQ L+ H + +N I + SA S+C P+G F
Sbjct: 214 PQQPQLLHHHNNHLGYQNGIHQITSINSAASSCSSPDGDSAF 255
>U13876-16|AAW88394.1| 420|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 6, isoform b
protein.
Length = 420
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 49 NPKRHDVNIVNLSLVSDVQIKKEVSTVPEPPQSLNLHRLNTRVRNSIENKRRLVSALSAC 108
N RH N+V D IKK+ ++ E L ++ +RN IE R + +L
Sbjct: 20 NVIRHLTNLVKSPASGDDDIKKKEDSIMELGNILAQNKQTEELRNMIEQTRPFLVSLGKA 79
Query: 109 LDPEGQRLFMAIARVIDD 126
+ R + + IDD
Sbjct: 80 KAAKLVRDLVDLCLKIDD 97
>U13876-15|AAA21173.2| 438|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 6, isoform a
protein.
Length = 438
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 49 NPKRHDVNIVNLSLVSDVQIKKEVSTVPEPPQSLNLHRLNTRVRNSIENKRRLVSALSAC 108
N RH N+V D IKK+ ++ E L ++ +RN IE R + +L
Sbjct: 38 NVIRHLTNLVKSPASGDDDIKKKEDSIMELGNILAQNKQTEELRNMIEQTRPFLVSLGKA 97
Query: 109 LDPEGQRLFMAIARVIDD 126
+ R + + IDD
Sbjct: 98 KAAKLVRDLVDLCLKIDD 115
>Z92790-4|CAB07227.2| 227|Caenorhabditis elegans Hypothetical
protein H03G16.5 protein.
Length = 227
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 70 KEVST--VPEPPQSLNLHRLNTRVRNSIENKRRLVSALSACLD 110
KE+S V + ++NL RL TRV I+NK L+ A L+
Sbjct: 65 KEISKKKVFKMDDTMNLLRLGTRVHLIIQNKEELIDKYKAMLE 107
>U61949-4|AAB03150.2| 414|Caenorhabditis elegans Hypothetical
protein F49E8.2 protein.
Length = 414
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 86 RLNTRVRNSIENKRRLVSALSACLDPEGQRLFMAIARVIDDVSW--AGQSIRVY--NNKI 141
R T VR I + +LVS P+ R + + D++ A + +R Y NN +
Sbjct: 19 RPRTFVRERIRTQFKLVSLFITM--PKSLRKRFVLVSIDDNIEQINAARKLRRYLTNNHL 76
Query: 142 HQVMITPPYKVDDVIGEKDSQSYNY 166
+ + + P ++ + + + DS ++N+
Sbjct: 77 NHIFSSTPEEMKEYLDKLDSGTFNF 101
>U49947-7|AAA93425.2| 382|Caenorhabditis elegans Hypothetical
protein C30G4.6 protein.
Length = 382
Score = 27.5 bits (58), Expect = 6.1
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 50 PKRHDVNIVNLSLVSDVQIKKEVSTVPEPPQSLNLHRLNTRVRNSIENK---RRLVSALS 106
P +HD +N+ + + + K+VS V P + +H N RN+ +++ S +
Sbjct: 250 PSKHDKYSLNVDVFHGLPVFKDVSVVETNPDNGGVHN-NPWTRNTTDSEYYTDEETSTEN 308
Query: 107 ACLDPEGQRLFMAIARVIDDVSWAGQSIRVYNN 139
C+ P F A+ +++V+NN
Sbjct: 309 FCIQPFTIASF-ALVVTFRSAETNPDNVKVHNN 340
>Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical
protein F58A4.14 protein.
Length = 443
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 27 GEVLAFDPQTKMLILKCQSSSGNPKRHDVNIVNLSLVSDV 66
G LA+DP IL S N HDV + + +DV
Sbjct: 257 GNCLAYDPANSQAILTIGSIMQNHSDHDVALNKYRVAADV 296
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 49 NPKRHDVNIVNLSLVSDVQIKKEVST--VPEPPQSLNLHRLNTRVRNSIENKRR 100
NP + + V++SL S +K++ VP PP + + RL ++ E KR+
Sbjct: 983 NPAQPGPSSVSISLESSCDTQKDIKVDDVPAPPLTFKVPRLTIKLGGD-EKKRK 1035
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 63 VSDVQIKKEVSTVPEPPQSLNLHRLNTRVRNSIENKRRL 101
VS V +KK++ + PE P+ N+ +L +R+S KRRL
Sbjct: 383 VSLVTMKKKLESTPEAPE--NVEKLRKELRDS--EKRRL 417
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.132 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,835,727
Number of Sequences: 27539
Number of extensions: 190986
Number of successful extensions: 467
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 455
Number of HSP's gapped (non-prelim): 15
length of query: 185
length of database: 12,573,161
effective HSP length: 77
effective length of query: 108
effective length of database: 10,452,658
effective search space: 1128887064
effective search space used: 1128887064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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