Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001732-TA|BGIBMGA001732-PA|undefined
(214 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29082-6|AAL02433.1| 207|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U29082-5|AAA68403.1| 210|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF133832-1|AAD32265.1| 221|Caenorhabditis elegans NIP3 protein. 50 1e-06
AF080583-1|AAC31574.1| 210|Caenorhabditis elegans Bcl-2/adenovi... 50 1e-06
AF022982-3|AAB69932.1| 670|Caenorhabditis elegans Hypothetical ... 32 0.36
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 0.47
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 0.47
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 30 1.4
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 29 1.9
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 29 1.9
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 29 1.9
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 29 2.5
>U29082-6|AAL02433.1| 207|Caenorhabditis elegans Hypothetical
protein C14F5.1b protein.
Length = 207
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 101 SNDWVWEWSSRPDQLPPKDWRF-KHPQSVRGPPSATSSIEVLEQQLAPPVMQQSHCLSVR 159
+ DW+W+WSSRP+ PPK R ++ ++ PP++ P + Q C S
Sbjct: 120 NTDWIWDWSSRPENTPPKTVRMVQYGSNLTTPPNSPE----------PELYQYLPCES-- 167
Query: 160 RTCLFSRGAIVAVLATNIVSLLLGAGIGYSNWVNLIE 196
LF+ + L TNI S ++GA +G++ LI+
Sbjct: 168 -DSLFNVRVVFGFLVTNIFSFVVGAAVGFAVCRKLIK 203
>U29082-5|AAA68403.1| 210|Caenorhabditis elegans Hypothetical
protein C14F5.1a protein.
Length = 210
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 101 SNDWVWEWSSRPDQLPPKDWRF-KHPQSVRGPPSATSSIEVLEQQLAPPVMQQSHCLSVR 159
+ DW+W+WSSRP+ PPK R ++ ++ PP++ P + Q C S
Sbjct: 123 NTDWIWDWSSRPENTPPKTVRMVQYGSNLTTPPNSPE----------PELYQYLPCES-- 170
Query: 160 RTCLFSRGAIVAVLATNIVSLLLGAGIGYSNWVNLIE 196
LF+ + L TNI S ++GA +G++ LI+
Sbjct: 171 -DSLFNVRVVFGFLVTNIFSFVVGAAVGFAVCRKLIK 206
>AF133832-1|AAD32265.1| 221|Caenorhabditis elegans NIP3 protein.
Length = 221
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 101 SNDWVWEWSSRPDQLPPKDWRF-KHPQSVRGPPSATSSIEVLEQQLAPPVMQQSHCLSVR 159
+ DW+W+WSSRP+ PPK R ++ ++ PP++ P + Q C S
Sbjct: 134 NTDWIWDWSSRPENTPPKTVRMVQYGSNLTTPPNSPE----------PELYQYLPCES-- 181
Query: 160 RTCLFSRGAIVAVLATNIVSLLLGAGIGYSNWVNLIE 196
LF+ + L TNI S ++GA +G++ LI+
Sbjct: 182 -DSLFNVRVVFGFLVTNIFSFVVGAAVGFAVCRKLIK 217
>AF080583-1|AAC31574.1| 210|Caenorhabditis elegans Bcl-2/adenovirus
E1B 19K-interactingprotein 3 protein.
Length = 210
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 101 SNDWVWEWSSRPDQLPPKDWRF-KHPQSVRGPPSATSSIEVLEQQLAPPVMQQSHCLSVR 159
+ DW+W+WSSRP+ PPK R ++ ++ PP++ P + Q C S
Sbjct: 123 NTDWIWDWSSRPENTPPKTVRMVQYGSNLTTPPNSPE----------PELYQYLPCES-- 170
Query: 160 RTCLFSRGAIVAVLATNIVSLLLGAGIGYSNWVNLIE 196
LF+ + L TNI S ++GA +G++ LI+
Sbjct: 171 -DSLFNVRVVFGFLVTNIFSFVVGAAVGFAVCRKLIK 206
>AF022982-3|AAB69932.1| 670|Caenorhabditis elegans Hypothetical
protein T23B12.6 protein.
Length = 670
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 93 YINCWRDDSNDWVWEWSSRPDQLPPKDWRFKHPQSVR-GPPSATSSIEVLEQQLA 146
Y+ C + + VW+ +S DQ K+ HPQ + PP+A + E+++ QLA
Sbjct: 572 YLFCGNGNGSVQVWDLTSALDQFHLKNG--SHPQQQQVNPPAAANQSELIKPQLA 624
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.47
Identities = 21/82 (25%), Positives = 29/82 (35%)
Query: 49 REAQRESRDSSVRHSRAXXXXXXXXXXXXXXXXXXXTEDELKGVYINCWRDDSNDWVWEW 108
RE +R+SR + R SR +D+ G Y N D+ +
Sbjct: 416 REMERKSRLDTERRSRRQSEGSRQIYIDRQISPERQRKDQYSGTYTNVNMQDNPQYSIRR 475
Query: 109 SSRPDQLPPKDWRFKHPQSVRG 130
P +PPK H Q V G
Sbjct: 476 EVPPPVIPPKPQVVPHVQRVNG 497
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 31.5 bits (68), Expect = 0.47
Identities = 21/82 (25%), Positives = 29/82 (35%)
Query: 49 REAQRESRDSSVRHSRAXXXXXXXXXXXXXXXXXXXTEDELKGVYINCWRDDSNDWVWEW 108
RE +R+SR + R SR +D+ G Y N D+ +
Sbjct: 638 REMERKSRLDTERRSRRQSEGSRQIYIDRQISPERQRKDQYSGTYTNVNMQDNPQYSIRR 697
Query: 109 SSRPDQLPPKDWRFKHPQSVRG 130
P +PPK H Q V G
Sbjct: 698 EVPPPVIPPKPQVVPHVQRVNG 719
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 114 QLPPKDWRFKHPQSVRGPPSATSSIEVLEQQLAPPVMQQSH 154
Q+PP+ + QS+ G + + LAPP QQ H
Sbjct: 777 QIPPRQMTPQQSQSIHGSMQNSPQNPQMRMNLAPPQQQQQH 817
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 123 KHPQSVRGPPSATSSIEVLEQQLAPPVMQQSHC 155
+HP + PPSA+S + E +AP V +Q C
Sbjct: 708 QHPPKIITPPSASSKRKEQEAAMAPLVNRQQSC 740
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 123 KHPQSVRGPPSATSSIEVLEQQLAPPVMQQSHC 155
+HP + PPSA+S + E +AP V +Q C
Sbjct: 708 QHPPKIITPPSASSKRKEQEAAMAPLVNRQQSC 740
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 123 KHPQSVRGPPSATSSIEVLEQQLAPPVMQQSHC 155
+HP + PPSA+S + E +AP V +Q C
Sbjct: 708 QHPPKIITPPSASSKRKEQEAAMAPLVNRQQSC 740
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 123 KHPQSVRGPPSATSSIEVLEQQLAPPVMQQSHC 155
+HP + PPSA+S + E +AP V +Q C
Sbjct: 612 QHPPKIITPPSASSKRKGQEATMAPLVNRQQSC 644
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.132 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,844,469
Number of Sequences: 27539
Number of extensions: 173661
Number of successful extensions: 470
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 457
Number of HSP's gapped (non-prelim): 12
length of query: 214
length of database: 12,573,161
effective HSP length: 78
effective length of query: 136
effective length of database: 10,425,119
effective search space: 1417816184
effective search space used: 1417816184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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