Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001731-TA|BGIBMGA001731-PA|undefined
(104 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 0.35
SPAC17G6.06 |rps2401|rps24-1, rps24|40S ribosomal protein S24|Sc... 27 0.80
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 26 1.1
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 26 1.1
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 26 1.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 1.8
SPBC17G9.07 |rps2402|rps24-2|40S ribosomal protein S24|Schizosac... 25 1.8
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 25 2.4
SPAC19G12.02c |pms1||MutL family mismatch-repair protein Pms1|Sc... 25 2.4
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 24 4.3
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 24 4.3
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 24 4.3
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 24 4.3
SPAC589.11 |mug82||translation release factor |Schizosaccharomyc... 24 4.3
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 24 5.6
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 24 5.6
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 23 7.4
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 23 7.4
SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation fac... 23 9.8
SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase Ark1|Schizosa... 23 9.8
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 23 9.8
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 23 9.8
SPCC1259.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 23 9.8
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.9 bits (59), Expect = 0.35
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 52 LGCRYPPQTMKRI-SVLAEKVSAKYKESR--KNKLKRTFVQASDAAEQKAKRTFKK 104
+GC Y ++ +I S + V+ + + R K +L+ FVQ S EQ+ R+F+K
Sbjct: 815 MGCDYSSVSILQIVSQIEHFVNQQIQTIRSLKQELRHDFVQFSGKKEQELSRSFEK 870
>SPAC17G6.06 |rps2401|rps24-1, rps24|40S ribosomal protein
S24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 134
Score = 26.6 bits (56), Expect = 0.80
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 43 AQIYTNIEFLGCRYPPQTMKRISVLA--EKVSAKYKESRKNKLKRTFVQASDAAEQKAKR 100
A IY ++E + P + R+ +KV+ + ++ RKN+ K+ F A++K+K+
Sbjct: 73 ALIYDDVEAMKKFEPHYRLVRVGHAEPIQKVARQQRKQRKNRGKKVFGTGKRLAKRKSKQ 132
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 26.2 bits (55), Expect = 1.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 64 ISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQ 96
++ L++KV K+K+ RK +R A+D E+
Sbjct: 113 LTQLSQKVKEKFKKMRKKPARRIVTIANDEEEE 145
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 26.2 bits (55), Expect = 1.1
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 5 IDVDSLRTEHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRI 64
I + + ++ SE+ V + K+ + E E L + TN++ Y KRI
Sbjct: 380 ISAEEMNQKYISEQTQLVEEALTKVMKEKYREKEN-NLELLETNLKTHHKDYKHALKKRI 438
Query: 65 SVLAEKVSAKYKESRKNKLKRTFVQA 90
+ L E+ + KE K+K+ + A
Sbjct: 439 TALEEEKNRLIKEIGPEKVKKAGILA 464
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 25.8 bits (54), Expect = 1.4
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 43 AQIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAKRTF 102
A+ YT E + P + I A+ V+A+ + S + +KR +++ +D ++KAK T+
Sbjct: 1101 AENYTRYELKASDHRPVSAL-IHSKAKMVNAQSQGSTWDVVKRKWIEYADEFKRKAKITY 1159
Score = 24.2 bits (50), Expect = 4.3
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 20 WEVRRSFLLEHKDDFPEAELVTLAQIYTNIEF 51
W+V + +E+ D+F +T YT++ +
Sbjct: 1137 WDVVKRKWIEYADEFKRKAKITYVMNYTSVSY 1168
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 1.8
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 23 RRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNK 82
R FL H DD PE EL T+ C+ P +I + ++S + + +R +
Sbjct: 1029 RNRFLEIHFDDIPENELETILH-------KRCKIAPSYAAKIVQVFRELSLRRQTTRIFE 1081
Query: 83 LKRTFVQASD 92
K +F D
Sbjct: 1082 QKNSFATLRD 1091
>SPBC17G9.07 |rps2402|rps24-2|40S ribosomal protein
S24|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 25.4 bits (53), Expect = 1.8
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 43 AQIYTNIEFLGCRYPPQTMKRISVLA--EKVSAKYKESRKNKLKRTFVQASDAAEQKAKR 100
A IY + E + P + R+ +KV+ + ++ RKN+ K+ F A++K+K+
Sbjct: 73 ALIYDSTESMKKFEPHYRLVRVGQAEPIQKVARQQRKQRKNRGKKVFGTGKRLAKRKSKQ 132
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 25.0 bits (52), Expect = 2.4
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Query: 62 KRISVLAEKVSAKYKESRKNKLKRTFVQA----SDAAEQKAKRTFK 103
+RI ++ E+ K+KE+ + +LK+ + A +A E++ K TFK
Sbjct: 150 ERIRLIEEQ---KHKENEQRRLKQEQIDAKRKEEEAREKRMKETFK 192
>SPAC19G12.02c |pms1||MutL family mismatch-repair protein
Pms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 794
Score = 25.0 bits (52), Expect = 2.4
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 55 RYPPQTMKRISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQK 97
R +M+R S L EKV+A E K KL F ++D + QK
Sbjct: 422 RLQKDSMRRSSPLNEKVTAS-SERMKKKL-ALFASSTDTSMQK 462
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 24.2 bits (50), Expect = 4.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 62 KRISVLAEKVSAKYKESRKNKLKRTFVQASDAAE 95
+ ++V +EK ++K K+ +KNK + V ++ E
Sbjct: 46 ENLAVSSEKTTSKKKKGKKNKGNKNQVSDDESQE 79
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 24.2 bits (50), Expect = 4.3
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 67 LAEKVSAKYKESRKNKLKRTFVQASDAAEQKAKRT 101
+AEK S K K ++ K K+T V SD+ K ++T
Sbjct: 199 VAEKHS-KDKLKKEEKEKKTAVDVSDSVNGKKRKT 232
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 24.2 bits (50), Expect = 4.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 70 KVSAKYKESRKNKLKRTFVQASDAAEQKAKRTFKK 104
K S + +ESR+N+L + ASD+ A T K
Sbjct: 401 KASDRQRESRENELPTKKLNASDSHNPLASLTTDK 435
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 24.2 bits (50), Expect = 4.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 69 EKVSAKYKESRKNKLKRTFVQASDAAEQKAKRTFKK 104
EK K K+ K+K KR+ A DA+E+ K KK
Sbjct: 462 EKKDKKEKKKEKSKKKRS---ADDASEEVKKSKKKK 494
>SPAC589.11 |mug82||translation release factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 182
Score = 24.2 bits (50), Expect = 4.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 57 PPQTMKRISVLAEKVSAKYKESRKNKLKR 85
PP+ + RIS+L ++ + K +K K K+
Sbjct: 145 PPEKIARISILKKESNEKRLSEKKYKQKK 173
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 23.8 bits (49), Expect = 5.6
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 47 TNIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLKR--TFVQASDA 93
+NI+ L CR P+ IS L E + K + + L+ T + AS A
Sbjct: 501 SNIKVLACRLDPKIDNTISALLENGNNKVINANCHLLRELVTLLPASTA 549
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 23.8 bits (49), Expect = 5.6
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 4 SIDVDSLRTEHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNI 49
S++V +HE + R FL++ + PE + + +A I+T +
Sbjct: 61 SVEVILQPLDHEPAPGTKCRDKFLVQSTELKPELQGMDIADIWTQV 106
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 23.4 bits (48), Expect = 7.4
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 36 EAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLKRTF 87
+ +LV ++ N+E L C Y +M S+ +SRK + R F
Sbjct: 674 DKQLVLPFHMHINLELLECVYLTCSMLMEIPAMAAASSTASDSRKRVISRPF 725
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1317
Score = 23.4 bits (48), Expect = 7.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 18 EQWEVRRSFLLEHKDDF 34
E W+ ++SF +HK +F
Sbjct: 606 ESWDFKQSFFDKHKQEF 622
>SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation factor
complex subunit Spp27|Schizosaccharomyces pombe|chr
3|||Manual
Length = 233
Score = 23.0 bits (47), Expect = 9.8
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 68 AEKVSA-KYKESRKNKLKRTFVQASDAAEQKAKRTFKK 104
+EK S K +RK K KR ++ ++ AKRT K+
Sbjct: 59 SEKESLEKQAPARKTKGKRATENGTEEGKKPAKRTRKR 96
>SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase
Ark1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 23.0 bits (47), Expect = 9.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 44 QIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKL 83
+IY +EF G Q ++R +E+V++KY N L
Sbjct: 161 RIYLILEFAGRGELYQHLRRAKRFSEEVASKYIFQMANAL 200
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 23.0 bits (47), Expect = 9.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 51 FLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAKRTFKK 104
F CRY +T K ++ + S+ ++ +K+K AS+A ++A + K+
Sbjct: 40 FKECRYRDETCKDDDIVVYEPSSFVQDEKKDK-PIIVEAASEATSEEACNSSKE 92
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 23.0 bits (47), Expect = 9.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 51 FLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAKRTFKK 104
F CRY +T K ++ + S+ ++ +K+K AS+A ++A + K+
Sbjct: 40 FKECRYRDETCKDDDIVVYEPSSFVQDEKKDK-PIIVEAASEATSEEACNSSKE 92
>SPCC1259.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 168
Score = 23.0 bits (47), Expect = 9.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 56 YPPQTMKRISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQK 97
+ P + IS + + SA SRK K KRT S+ +K
Sbjct: 126 HSPLQSRGISPSSAQSSAAVSSSRKQKRKRTSEGPSERRARK 167
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.128 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,747
Number of Sequences: 5004
Number of extensions: 15221
Number of successful extensions: 66
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 49
Number of HSP's gapped (non-prelim): 24
length of query: 104
length of database: 2,362,478
effective HSP length: 63
effective length of query: 41
effective length of database: 2,047,226
effective search space: 83936266
effective search space used: 83936266
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)
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