Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001731-TA|BGIBMGA001731-PA|undefined
(104 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0435 - 23519908-23520054,23520398-23520514,23521152-235212... 28 1.6
06_03_1008 + 26873805-26873891,26874038-26874107,26874237-268743... 28 1.6
04_04_1193 + 31634043-31634349,31634685-31634847,31635048-316366... 27 2.8
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 26 4.9
05_01_0562 + 4907937-4907990,4908890-4909075,4909180-4909285,490... 26 4.9
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 26 6.4
10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301 26 6.4
10_08_0897 - 21419639-21420633,21420826-21421153 26 6.4
10_07_0178 - 13856391-13856458,13857231-13858211,13858848-13859175 26 6.4
10_06_0082 - 10467972-10468486,10468530-10468670,10469211-10469538 26 6.4
09_01_0073 - 1057560-1058043,1058199-1058385,1058754-1059062,105... 26 6.4
03_01_0076 - 625609-625809,625919-626000,626303-626390,626496-62... 26 6.4
11_04_0097 + 13448740-13450725 25 8.5
03_06_0639 - 35227780-35227813,35227963-35228099,35228505-35229449 25 8.5
>11_06_0435 -
23519908-23520054,23520398-23520514,23521152-23521263,
23521491-23521540,23522001-23522129,23522289-23522375,
23523635-23523679,23523817-23523887,23523925-23524005,
23524547-23524602,23526489-23526595
Length = 333
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 45 IYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLK 84
++ N E L R P Q + ++ + AEK K + K K+K
Sbjct: 275 VFINEEILKARTPHQVLMKVEIPAEKFHDKNENLMKVKMK 314
>06_03_1008 +
26873805-26873891,26874038-26874107,26874237-26874334,
26874505-26874643,26874778-26874860,26875145-26875195,
26875305-26875370,26875465-26875530,26875637-26875717,
26876042-26876119,26876218-26876394,26876467-26876545,
26876752-26876870,26877029-26877430
Length = 531
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 39 LVTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLKRTF 87
++ L +Y +++ + KR AEK+SA Y+ ++ +L RTF
Sbjct: 192 IINLVDMYFDMQKYDAIKALEIYKRAGYQAEKLSAFYEHCKRLELARTF 240
>04_04_1193 +
31634043-31634349,31634685-31634847,31635048-31636622,
31636653-31637541,31639401-31641266
Length = 1599
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 37 AELVTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKE---SRKNKLKRTFVQASDA 93
A+LV+ ++ T I+ C P T++ +S+L + KY++ SR + +R ++
Sbjct: 586 AKLVSQSEFAT-IDGSECEELPSTIRHVSILTDSAYNKYEDGDFSRNEEFERRLLKVRSR 644
Query: 94 AEQK 97
++ K
Sbjct: 645 SKLK 648
>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 20 WEVRRSFLLEHKDDFPEAE 38
WE + SF+LEH PE E
Sbjct: 1036 WEEKASFILEHSAALPEFE 1054
>05_01_0562 +
4907937-4907990,4908890-4909075,4909180-4909285,
4909377-4909513,4909989-4910072,4910157-4910248,
4910358-4910466,4910554-4910640,4910737-4910829,
4911384-4911581,4911659-4911810,4911910-4912060,
4912174-4912272,4912362-4912535,4912680-4912758,
4912858-4912979
Length = 640
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/36 (44%), Positives = 18/36 (50%)
Query: 69 EKVSAKYKESRKNKLKRTFVQASDAAEQKAKRTFKK 104
EK S K S K LK+ + DAAE KR KK
Sbjct: 516 EKSSKKEASSSKAPLKKRKPKGGDAAEGSEKRKPKK 551
>11_03_0065 -
9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 2 KPSIDVDSLRTEHESEEQWEVRRSFLLEHKDD 33
+P ++ L EEQWEV LLE ++
Sbjct: 320 EPREEIQKLDKVLSEEEQWEVNEKLLLESYEE 351
>10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301
Length = 1116
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 2 KPSIDVDSLRTEHESEEQWEVRRSFLLEHKDD 33
+P ++ L EEQWEV LLE ++
Sbjct: 172 EPREEIQKLDKVLSEEEQWEVNEKLLLESYEE 203
>10_08_0897 - 21419639-21420633,21420826-21421153
Length = 440
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 2 KPSIDVDSLRTEHESEEQWEVRRSFLLEHKDD 33
+P ++ L EEQWEV LLE ++
Sbjct: 320 EPREEIQKLDKVLSEEEQWEVNEKLLLESYEE 351
>10_07_0178 - 13856391-13856458,13857231-13858211,13858848-13859175
Length = 458
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 2 KPSIDVDSLRTEHESEEQWEVRRSFLLEHKDD 33
+P ++ L EEQWEV LLE ++
Sbjct: 172 EPREEIQKLDKVLSEEEQWEVNEKLLLESYEE 203
>10_06_0082 - 10467972-10468486,10468530-10468670,10469211-10469538
Length = 327
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 2 KPSIDVDSLRTEHESEEQWEVRRSFLLEHKDD 33
+P ++ L EEQWEV LLE ++
Sbjct: 189 EPREEIQKLDKVLSEEEQWEVNEKLLLESYEE 220
>09_01_0073 -
1057560-1058043,1058199-1058385,1058754-1059062,
1059427-1060269,1061572-1062552,1063189-1063516
Length = 1043
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 2 KPSIDVDSLRTEHESEEQWEVRRSFLLEHKDD 33
+P ++ L EEQWEV LLE ++
Sbjct: 172 EPREEIQKLDKVLSEEEQWEVNEKLLLESYEE 203
>03_01_0076 -
625609-625809,625919-626000,626303-626390,626496-626528,
627446-627569
Length = 175
Score = 25.8 bits (54), Expect = 6.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 61 MKRISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAKRTFKK 104
+KRI EK A Y+E KNKL + A E++A T K+
Sbjct: 105 LKRIEQELEKKKAAYEEKLKNKLA---LLHKTAEEKRALTTAKR 145
>11_04_0097 + 13448740-13450725
Length = 661
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 23 RRSFLLEHKDDFPEAELVTLAQIYTN 48
RR L +DD EA L+T IY+N
Sbjct: 107 RRILALVREDDLDEAALLTRHSIYSN 132
>03_06_0639 - 35227780-35227813,35227963-35228099,35228505-35229449
Length = 371
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 2 KPSIDVDSLRTEHESEEQWEVRRSFLLEHKDDF 34
KP +DV+ ++ S E+ LE+K+DF
Sbjct: 183 KPDVDVEKIKFHRFSFEETTATLHLKLENKNDF 215
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.128 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,689,535
Number of Sequences: 37544
Number of extensions: 85217
Number of successful extensions: 225
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 211
Number of HSP's gapped (non-prelim): 16
length of query: 104
length of database: 14,793,348
effective HSP length: 72
effective length of query: 32
effective length of database: 12,090,180
effective search space: 386885760
effective search space used: 386885760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)
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