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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001731-TA|BGIBMGA001731-PA|undefined
         (104 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g27170.1 68416.m03398 chloride channel protein (CLC-b) identi...    29   0.45 
At3g11010.1 68416.m01329 disease resistance family protein / LRR...    29   0.59 
At2g07260.1 68415.m00833 hypothetical protein                          29   0.78 
At3g28890.1 68416.m03606 leucine-rich repeat family protein cont...    28   1.0  
At1g63240.1 68414.m07148 expressed protein                             28   1.0  
At5g27060.1 68418.m03229 disease resistance family protein conta...    28   1.4  
At5g12370.1 68418.m01455 exocyst complex component Sec10-related...    28   1.4  
At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7) ident...    28   1.4  
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea...    28   1.4  
At1g14610.1 68414.m01737 valyl-tRNA synthetase / valine--tRNA li...    28   1.4  
At3g44840.1 68416.m04831 S-adenosyl-L-methionine:carboxyl methyl...    27   1.8  
At3g05660.1 68416.m00630 disease resistance family protein conta...    27   1.8  
At2g36880.1 68415.m04521 S-adenosylmethionine synthetase, putati...    27   3.1  
At5g52290.1 68418.m06489 hypothetical protein                          26   4.2  
At5g08230.1 68418.m00965 PWWP domain-containing protein putative...    26   4.2  
At3g44870.1 68416.m04834 S-adenosyl-L-methionine:carboxyl methyl...    26   4.2  
At3g21465.1 68416.m02707 expressed protein                             26   4.2  
At3g11080.1 68416.m01339 disease resistance family protein conta...    26   4.2  
At3g09630.1 68416.m01142 60S ribosomal protein L4/L1 (RPL4A) str...    26   4.2  
At2g40430.1 68415.m04986 expressed protein identical to Protein ...    26   4.2  
At1g12050.1 68414.m01391 fumarylacetoacetase, putative similar t...    26   4.2  
At5g15020.1 68418.m01761 paired amphipathic helix repeat-contain...    25   7.3  
At5g02870.1 68418.m00230 60S ribosomal protein L4/L1 (RPL4D) 60S...    25   7.3  
At3g44860.1 68416.m04833 S-adenosyl-L-methionine:carboxyl methyl...    25   7.3  
At2g25980.1 68415.m03120 jacalin lectin family protein similar t...    25   7.3  
At5g53770.1 68418.m06681 nucleotidyltransferase family protein c...    25   9.6  
At3g18520.2 68416.m02354 histone deacetylase family protein simi...    25   9.6  
At3g18520.1 68416.m02353 histone deacetylase family protein simi...    25   9.6  
At3g13940.1 68416.m01760 expressed protein weak similarity to DN...    25   9.6  
At1g67590.1 68414.m07700 remorin family protein contains Pfam do...    25   9.6  

>At3g27170.1 68416.m03398 chloride channel protein (CLC-b) identical
           to CLC-b chloride channel protein GB:CAA96058 from
           [Arabidopsis thaliana] (J. Biol. Chem. 271 (52),
           33632-33638 (1996))
          Length = 780

 Score = 29.5 bits (63), Expect = 0.45
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query: 12  TEHESEEQWEVRRSF----LLEHKDDFPEAELVTL-AQIYTNIEFLGCRYPPQTMKRISV 66
           TE    E+WEVR  F    L E +D+F +  + +   ++Y ++  L    P   M+ +SV
Sbjct: 662 TEKRRTEEWEVREKFPWDELAEREDNFDDVAITSAEMEMYVDLHPLTNTTPYTVMENMSV 721


>At3g11010.1 68416.m01329 disease resistance family protein / LRR
           family protein contains leucine rich-repeat domains
           Pfam:PF00560, INTERPRO:IPR001611; similar to disease
           resistance protein [Lycopersicon esculentum]
           gi|3894383|gb|AAC78591
          Length = 894

 Score = 29.1 bits (62), Expect = 0.59
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 36  EAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAE 69
           E+ELV +  IYT ++F G ++  +  K I +L E
Sbjct: 695 ESELVRILTIYTAVDFSGNKFEGEIPKSIGLLKE 728


>At2g07260.1 68415.m00833 hypothetical protein
          Length = 300

 Score = 28.7 bits (61), Expect = 0.78
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 2/95 (2%)

Query: 12  TEHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNI-EFLGCRYPPQTMKRISV-LAE 69
           TE ES+ Q E       E K D  +     L+     I +       P T   +S  + E
Sbjct: 164 TEKESQPQKEETTKVPKETKKDDEDVNQTPLSTQEEEITQGQSSLQTPLTPVMLSQEVME 223

Query: 70  KVSAKYKESRKNKLKRTFVQASDAAEQKAKRTFKK 104
           ++  K K+  KNKL R  + + +  E+K K   KK
Sbjct: 224 EIDLKVKKWAKNKLIRDLLSSLEEDEKKYKLALKK 258


>At3g28890.1 68416.m03606 leucine-rich repeat family protein
           contains leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; contains similarity to Hcr2-0B
           [Lycopersicon esculentum] gi|3894387|gb|AAC78593
          Length = 711

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 36  EAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAE 69
           E+EL+ +  IYT ++F G ++  +  K I +L E
Sbjct: 512 ESELIRILTIYTALDFSGNKFEGEIPKSIGLLKE 545


>At1g63240.1 68414.m07148 expressed protein
          Length = 548

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 4/69 (5%)

Query: 5   IDVDSLRTEHESEEQWEVRRSFLL----EHKDDFPEAELVTLAQIYTNIEFLGCRYPPQT 60
           +D +S+ +E  S E +E   + +     E ++DF E E V   + ++NI     R  P+ 
Sbjct: 131 LDENSMESEDSSGEVYETGCNEITYAIEEDEEDFSEREYVENVENFSNITSTPLRSQPER 190

Query: 61  MKRISVLAE 69
           M+++   A+
Sbjct: 191 MQKLESRAK 199


>At5g27060.1 68418.m03229 disease resistance family protein contains
           leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
           esculentum] gi|3894387|gb|AAC78593
          Length = 957

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 38  ELVTLAQIYTNIEFLGCRYPPQTMKRISVLAE 69
           ELV +  IYT ++F G R+  +  K I +L E
Sbjct: 760 ELVRILTIYTAVDFSGNRFEGEIPKSIGLLKE 791


>At5g12370.1 68418.m01455 exocyst complex component Sec10-related
           low similarity to SP|O00471 Exocyst complex component
           Sec10 (hSec10) {Homo sapiens}
          Length = 858

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 21  EVRRSFLLEHKDDFPEAELVTLAQIY 46
           ++  S    HKD++PE E  +L Q+Y
Sbjct: 466 DLTESLFSSHKDEYPEHERASLKQLY 491


>At4g27430.1 68417.m03942 COP1-interacting protein 7 (CIP7)
           identical to COP1-Interacting Protein 7 (CIP7)
           GI:3327868 from [Arabidopsis thaliana]
          Length = 1058

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 6   DVDSLRTEHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNI--EFLGCRYPP 58
           D DS   E +  + W+  ++ LL+  D  PE EL+ ++    N+  E +  R PP
Sbjct: 450 DDDSSNKETKGNDNWDAFQNLLLKDNDSEPE-ELLRISSTALNMASEVVRKREPP 503


>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
           family protein contains Pfam profile: PF00400 WD domain,
           G-beta repeat (10 copies); similar to WD-repeat protein
           3 (SP:Q9UNX4) [Homo sapiens]
          Length = 955

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 10/88 (11%)

Query: 13  EHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNI--EFLGCRYPPQTMKRISVLAEK 70
           EH +E +WE+ + F      +        +A++  N+  + L C+   +T++   VL E 
Sbjct: 242 EHSTENKWEILKLF-----GEIQRQTKDRVARVRFNVSGKLLACQMAGKTIEIFRVLDE- 295

Query: 71  VSAKYKESRKNKLKRTFVQASDAAEQKA 98
             A+ K+  K +L+R   ++S   ++ +
Sbjct: 296 --AEAKQKAKRRLRRKEKKSSKVGDENS 321


>At1g14610.1 68414.m01737 valyl-tRNA synthetase / valine--tRNA ligase
            (VALRS) nearly identical to SP|P93736 Valyl-tRNA
            synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS)
            {Arabidopsis thaliana}
          Length = 1108

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 59   QTMKRISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAKR 100
            Q M  +S   EKV A  KE   NKL +  +Q  D  E+++ R
Sbjct: 1057 QKMMSVSTYEEKVPANIKEDNANKLAK-ILQEFDFFEKESAR 1097


>At3g44840.1 68416.m04831 S-adenosyl-L-methionine:carboxyl
           methyltransferase family protein similar to
           defense-related protein cjs1 [Brassica
           carinata][GI:14009292][Mol Plant Pathol (2001)
           2(3):159-169]
          Length = 348

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 15/64 (23%), Positives = 26/64 (40%)

Query: 40  VTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAK 99
           + LA    NI   GC   P T + +  + + V  KY++    +     V  +D++     
Sbjct: 44  IDLASNLVNIADFGCSTGPNTFRAVQTIIDAVEHKYQQENNLEEIEFQVFFNDSSNNDFN 103

Query: 100 RTFK 103
             FK
Sbjct: 104 TLFK 107


>At3g05660.1 68416.m00630 disease resistance family protein contains
           leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
           pimpinellifolium] gi|1184077|gb|AAC15780
          Length = 883

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 36  EAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAE 69
           E ELV + +IYT ++F G ++  +  + I +L E
Sbjct: 679 EMELVRILKIYTALDFSGNKFEGEIPRSIGLLKE 712


>At2g36880.1 68415.m04521 S-adenosylmethionine synthetase, putative
           similar to S-adenosylmethionine synthetase 3 (Methionine
           adenosyltransferase 3, AdoMet synthetase 3)
           [Lycopersicon esculentum] SWISS-PROT:P43282
          Length = 390

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)

Query: 58  PQTMKRISVLAEKVSAKYKESRKNK 82
           P+ M    VLA K+ AK  E RKNK
Sbjct: 135 PELMPLTHVLATKLGAKLTEVRKNK 159


>At5g52290.1 68418.m06489 hypothetical protein
          Length = 1569

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 31  KDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVS 72
           +D+F E ++VT+ +I    EF G    P T +   +L   +S
Sbjct: 259 EDEFSEMDIVTILEISNAEEFQGKVAVPVTYEEFQILDVDIS 300


>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
           transcription factor (HUA2) - Arabidopsis thaliana,
           EMBL:AF116556
          Length = 1445

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 52  LGCRYPPQTMKRISVLAEKVSAKYKESRKNK 82
           L  R   +T+K  S   E++SA ++ES+K K
Sbjct: 82  LSARCQGKTVKYFSQAVEEISAAFEESQKQK 112


>At3g44870.1 68416.m04834 S-adenosyl-L-methionine:carboxyl
          methyltransferase family protein similar to
          defense-related protein cjs1 [Brassica
          carinata][GI:14009292][Mol Plant Pathol (2001)
          2(3):159-169]
          Length = 379

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 48 NIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLKRTFVQASD 92
          NI   GC   P T   +  L + V  KYK+    + +  F  +S+
Sbjct: 52 NIADFGCSSGPNTFTAVQTLIDAVENKYKKESNIEFQVFFNDSSN 96


>At3g21465.1 68416.m02707 expressed protein
          Length = 388

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)

Query: 6   DVDSLR----TEHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIY 46
           +VD LR    T+H     +   + FLLEHK +   A +  + Q Y
Sbjct: 272 NVDKLRSETYTQHTLSGAFSCAKGFLLEHKPEEAAAVIQIICQAY 316


>At3g11080.1 68416.m01339 disease resistance family protein contains
           leucine rich-repeat domains Pfam:PF00560,
           INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
           pimpinellifolium] gi|1184077|gb|AAC15780
          Length = 943

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 38  ELVTLAQIYTNIEFLGCRYPPQTMKRISVLAE 69
           ELV +  IYT ++F G ++  +  K I +L E
Sbjct: 748 ELVRILTIYTALDFSGNKFEGEIPKSIGLLKE 779


>At3g09630.1 68416.m01142 60S ribosomal protein L4/L1 (RPL4A) strong
           similarity to 60S ribosomal protein L1 GB:P49691
          Length = 406

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 14/46 (30%), Positives = 26/46 (56%)

Query: 59  QTMKRISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAKRTFKK 104
           +T KR+S+LAE    K K+ +  K ++T  +    A + A +++ K
Sbjct: 339 KTAKRMSLLAEAQRVKAKKEKLAKKRKTVTKEEALAIKAAGKSWYK 384


>At2g40430.1 68415.m04986 expressed protein identical to Protein
           At2g40430 (Swiss-Prot:O22892) [Arabidopsis thaliana];
           similar to Glioma tumor suppressor candidate region gene
           2 protein (p60) (Swiss-Prot:Q9NZM5) [Homo sapiens]
          Length = 442

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 49  IEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKL 83
           IE  GC Y P T     +LAE V+ + ++  K +L
Sbjct: 152 IEHPGCSYNPTTESHQDMLAEAVAQEMQKVYKTEL 186


>At1g12050.1 68414.m01391 fumarylacetoacetase, putative similar to
           fumarylacetoacetase (Fumarylacetoacetate hydrolase,
           Beta-diketonase, FAA)[Rattus norvegicus]
           SWISS-PROT:P25093
          Length = 421

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 49  IEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLK 84
           +E  GC+ P Q    +  LAEK S  Y  S + +LK
Sbjct: 274 LEPFGCQAPKQDPPPLPYLAEKESVNYDISLEVQLK 309


>At5g15020.1 68418.m01761 paired amphipathic helix repeat-containing
            protein similar to transcription co-repressor Sin3
            [Xenopus laevis] GI:4960210; contains Pfam profile
            PF02671: Paired amphipathic helix repeat
          Length = 1377

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 8    DSLRTEHESEEQWEVRRSFLLEHKDDFPEAELVTLA 43
            D +  + ESE + E   S L+E K  FP +E V L+
Sbjct: 1049 DEIDGKAESEGEAEGMESHLIEDKGLFPSSERVLLS 1084


>At5g02870.1 68418.m00230 60S ribosomal protein L4/L1 (RPL4D) 60S
           roibosomal protein L4, Arabidopsis thaliana,
           EMBL:CAA79104
          Length = 407

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 59  QTMKRISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQKA 98
           +T KR+S+LAE    K K+ +  K KR  V   +A   KA
Sbjct: 340 KTAKRMSLLAEASRVKAKKEKLEK-KRKVVTKEEAQAIKA 378


>At3g44860.1 68416.m04833 S-adenosyl-L-methionine:carboxyl
          methyltransferase family protein similar to
          defense-related protein cjs1 [Brassica
          carinata][GI:14009292][Mol Plant Pathol (2001)
          2(3):159-169]
          Length = 348

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 48 NIEFLGCRYPPQTMKRISVLAEKVSAKYKE 77
          NI   GC   P T   +  L + V  KYK+
Sbjct: 52 NIADFGCSSGPNTFTAVQTLIDAVENKYKK 81


>At2g25980.1 68415.m03120 jacalin lectin family protein similar to
           myrosinase-binding protein homolog [Arabidopsis
           thaliana] GI:2997767; contains Pfam profile PF01419
           jacalin-like lectin domain
          Length = 449

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 14/47 (29%), Positives = 22/47 (46%)

Query: 56  YPPQTMKRISVLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAKRTF 102
           YP + +  I V  +KVS      R    K +  + S    +K++RTF
Sbjct: 219 YPYEYITSIEVTCDKVSGNTNRVRSLSFKTSKDRTSPTYGRKSERTF 265


>At5g53770.1 68418.m06681 nucleotidyltransferase family protein
           contains Pfam domains PF03828: PAP/25A associated
           domain, PF01909: Nucleotidyltransferase domain
          Length = 530

 Score = 25.0 bits (52), Expect = 9.6
 Identities = 16/71 (22%), Positives = 31/71 (43%)

Query: 14  HESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVSA 73
           HE   Q+ V R  + +  DD    E  T+     ++E        + +  + V ++K S 
Sbjct: 34  HEESHQYSVFRKEISDFPDDTTPVESATVDFFSLDVEGETTENGVEPVTPVVVASKKKSK 93

Query: 74  KYKESRKNKLK 84
           K K+  + +L+
Sbjct: 94  KRKKDEEPRLE 104


>At3g18520.2 68416.m02354 histone deacetylase family protein similar
           to SP|P53973 Histone deacetylase HDA1 {Saccharomyces
           cerevisiae}; contains Pfam profile PF00850: Histone
           deacetylase family; AT-acceptor splice site at intron 7
          Length = 556

 Score = 25.0 bits (52), Expect = 9.6
 Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 31  KDDFPEAELVTLAQIYTNIEFLGCR--YPPQTMKRISVLAEKVSAKYKESRKNKLKRTFV 88
           +++ P A   ++A + T ++ L  +  + P      S L  ++ A+  E++KN++KR  V
Sbjct: 470 ENELPIATTPSVAGLQTVLDVLNIQLEFWPSLAISYSKLLSELEARLIENKKNQMKRKVV 529

Query: 89  Q 89
           +
Sbjct: 530 R 530


>At3g18520.1 68416.m02353 histone deacetylase family protein similar
           to SP|P53973 Histone deacetylase HDA1 {Saccharomyces
           cerevisiae}; contains Pfam profile PF00850: Histone
           deacetylase family; AT-acceptor splice site at intron 7
          Length = 552

 Score = 25.0 bits (52), Expect = 9.6
 Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 31  KDDFPEAELVTLAQIYTNIEFLGCR--YPPQTMKRISVLAEKVSAKYKESRKNKLKRTFV 88
           +++ P A   ++A + T ++ L  +  + P      S L  ++ A+  E++KN++KR  V
Sbjct: 466 ENELPIATTPSVAGLQTVLDVLNIQLEFWPSLAISYSKLLSELEARLIENKKNQMKRKVV 525

Query: 89  Q 89
           +
Sbjct: 526 R 526


>At3g13940.1 68416.m01760 expressed protein weak similarity to
           DNA-directed RNA polymerase I 49 kDa polypeptide (EC
           2.7.7.6) (A49) (Swiss-Prot:O14086) [Schizosaccharomyces
           pombe]; similar to Nuclear pore complex protein Nup107
           (Nucleoporin Nup107) (107 kDa nucleoporin) (p105)
           (Swiss-Prot:P52590) [Rattus norvegicus]
          Length = 442

 Score = 25.0 bits (52), Expect = 9.6
 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 10  LRTEHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAE 69
           + TE E E + + R +  +    + P+     +A   T  +   C+  P+T KR+    +
Sbjct: 32  IATETEDENEEDKRVTLKVTQVAERPDRISPIVAYFSTGYD--PCKVDPKTGKRVHETPK 89

Query: 70  KVSAKYKESRKNKLK 84
               K+K+  K +++
Sbjct: 90  VTVYKHKDDSKKRIQ 104


>At1g67590.1 68414.m07700 remorin family protein contains Pfam
           domain, PF03763: Remorin, C-terminal region
          Length = 347

 Score = 25.0 bits (52), Expect = 9.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 61  MKRISVLAEKVSAKYKESRKNKLKRT 86
           MK++ V AE++ A+ +E   NKL  T
Sbjct: 270 MKKMEVKAERMKARAEEKLANKLAAT 295


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.314    0.128    0.352 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,265,584
Number of Sequences: 28952
Number of extensions: 75011
Number of successful extensions: 303
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 278
Number of HSP's gapped (non-prelim): 33
length of query: 104
length of database: 12,070,560
effective HSP length: 71
effective length of query: 33
effective length of database: 10,014,968
effective search space: 330493944
effective search space used: 330493944
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)

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