Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001730-TA|BGIBMGA001730-PA|IPR007122|Gelsolin,
IPR007123|Gelsolin region
(756 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 34 0.084
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 31 0.59
SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyce... 29 1.8
SPBC776.06c |||spindle pole body interacting protein |Schizosacc... 29 1.8
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 29 2.4
SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomy... 29 3.2
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 28 4.2
SPAC3G9.15c |fcf2||rRNA processing protein Fcf2 |Schizosaccharom... 28 5.5
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 28 5.5
SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating ... 28 5.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 7.3
SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 27 7.3
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 27 9.6
SPCC962.04 |rps1201|rps12-1, rps12|40S ribosomal protein S12|Sch... 27 9.6
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 33.9 bits (74), Expect = 0.084
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 512 PQNSKKSYEEDQTRLFRVEGTETGVDMRAVQVAEESNVLEDDDVFVLETGSGVYVWNGKD 571
P NSK E + L +++GT ++ + + + + +E+D V +GV+ NGK
Sbjct: 74 PTNSKVIVESFSSPLKKLDGTM--INFKEKNIQHDLDGVENDFATVQSASNGVHAINGKR 131
Query: 572 SDPQEQE 578
+ P E E
Sbjct: 132 THPDESE 138
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 31.1 bits (67), Expect = 0.59
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 49 EESSSLTHDAHFWLGSKTTQDKKGSAAIWTITLDDMLGGRAVHHREVQGHESS 101
E+ + T FW T +G+ A+W +T+DD LG + H + +E +
Sbjct: 1460 EKEALNTFGNEFWKRDPTIAPIRGALAVWGLTIDD-LGVASFHGTSTKANEKN 1511
>SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 219 EDVNLFFETLGSGSMDELVSDDTSESYTRSDISAVYLYKVLDGDEQE--LVSMNKPYKQK 276
ED+N E S S ++ + ++ ES DI+ + +V DEQ+ ++S++K K+
Sbjct: 40 EDLNSEDEFYQSNSSEDEIEEEVQESTIADDIADILNQQVTQTDEQDTPVLSLSKKSKKA 99
Query: 277 HLASDA 282
S+A
Sbjct: 100 LRKSNA 105
>SPBC776.06c |||spindle pole body interacting protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 496 KGSLVVLFGSKDD-DYQPQNSKKSYEEDQTRLFRVEGTETGVDMRAVQV 543
K ++ LF + DD +++P +S Y + R RVEGT G + A+ +
Sbjct: 61 KSNVFSLFSNVDDINFEPSDSNMYYVLNTIRAKRVEGTRRGGSVFAMAI 109
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 209 IEIIDEFSSDEDVNLFFETLGSGSMDELVSDDTSESYTRS-DISAVYLYKVLDGDEQELV 267
I ++ E SS + +L+ ++ + ++ + R DI+ +Y++L G EQE+
Sbjct: 321 ITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIY 380
Query: 268 SMNKPYKQKHLASDAMYILDTGDTGVYIW 296
S++ K L S +GD V +W
Sbjct: 381 SLDFSKDGKTLVS------GSGDRTVCLW 403
>SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 442
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 338 STFKQYFHNWDTVRTGGSVRGIISEIDSGY 367
+ F Q WDT G +R I+E +SGY
Sbjct: 148 AVFNQQVTRWDTDHCNGGLRWQITEFNSGY 177
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 181 EGAKATQRRKIISVANKLRDEEHNGRATIEIIDEFSSD-EDVNLFFETLGSGSMDELVSD 239
E K Q+R V N L+D + + + S +DV++ LG G + +L +D
Sbjct: 344 EDKKKAQKRDKKVVKNALKDFNYFSATDVPSAEHVDSVLKDVDVIMSKLGEGELGQLAAD 403
Query: 240 DTSESYT-RSDISAVY 254
+E + + AV+
Sbjct: 404 INAEKAAGAASVQAVF 419
>SPAC3G9.15c |fcf2||rRNA processing protein Fcf2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 230
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 453 EASDDDKEAGQMLLSQLEEDLEGNVTSVKVPQGKESKHFLSIFKGSLV 500
+ASDDDK Q LL+++ + + +S ++P E K + + K LV
Sbjct: 28 QASDDDKHGQQKLLTKIPKIIS---SSFELPSYFEKKFVMGLKKDELV 72
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 684 TERVKSSKQEVIKKYIEDDGLDRTVDSAVVVTVKQGAEPRVFKKLFPDWDDGMWS 738
TE KSS+++ +++I DD D+ V + + P F + P W+ G+WS
Sbjct: 623 TEIRKSSRKQKAQRFIRDD-----FDT---VFFQSSSNPNYFTDVNPFWNIGIWS 669
>SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating
kinase Crk1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 198 LRDEEHNGRATIEIIDEFSSDEDVNLFFETLGSGSMDELVSD 239
LR+ H+ IE++D FS+ ++N+ E L S ++ L+ D
Sbjct: 62 LRESRHDN--VIELVDVFSTKSNLNIILEFLDS-DLEMLIKD 100
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 721 EPRVFKKL-FPDWDDGMWSKLSSYEDMKNSTKAANSK 756
E +FK FP W+ W K S +E+ K N++
Sbjct: 1510 EHTMFKATGFPSWEGLFWEKASGFEESMKFKKLTNAQ 1546
>SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 338 STFKQYFHNWDTVRTGGSVRGIISEIDSGY 367
+ F + WDT GG VR I ++GY
Sbjct: 205 AVFNEIMSRWDTSSCGGGVRWQIYSFNNGY 234
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 290 DTGVYIWLGSDLDA---DVKRKYHEIAGKYLEDK 320
DT Y LG DA D+K+ Y ++A KY DK
Sbjct: 6 DTEYYDLLGISTDATAVDIKKAYRKLAVKYHPDK 39
>SPCC962.04 |rps1201|rps12-1, rps12|40S ribosomal protein
S12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 145
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 661 LSEDGVYI--LDTGEELYFWQGADVTERVKSSKQEVIKKYIEDDGLDRTVDSA 711
+SE G I +D EE+ A T V+ + +EV+K+ + DGL R + A
Sbjct: 1 MSEQGDQIEQVDVVEEVEVEAAAPETVSVEDALKEVLKRALVHDGLARGIREA 53
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,526,183
Number of Sequences: 5004
Number of extensions: 155303
Number of successful extensions: 374
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 367
Number of HSP's gapped (non-prelim): 15
length of query: 756
length of database: 2,362,478
effective HSP length: 78
effective length of query: 678
effective length of database: 1,972,166
effective search space: 1337128548
effective search space used: 1337128548
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 57 (27.1 bits)
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