Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001729-TA|BGIBMGA001729-PA|undefined
         (240 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    27   0.17 
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    23   2.1  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   2.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.7  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   6.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   6.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   6.4  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 193 SREEIERFRTSVDDISCDKVTQRLGLVKPYYDIRLEK 229
           S +   ++ T  D+I  + V +   L+K Y D  LEK
Sbjct: 19  SEDTTHKYTTKYDNIDLENVVKNERLLKSYVDCLLEK 55


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/32 (25%), Positives = 20/32 (62%)

Query: 198 ERFRTSVDDISCDKVTQRLGLVKPYYDIRLEK 229
           E++ T  D+I  +++ +   L+K Y++  +E+
Sbjct: 22  EKYTTKYDNIDLEEILKSDRLLKNYFNCLMER 53


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/32 (25%), Positives = 20/32 (62%)

Query: 198 ERFRTSVDDISCDKVTQRLGLVKPYYDIRLEK 229
           E++ T  D+I+ D++     L+K Y++  +++
Sbjct: 17  EQYTTKYDNINVDEILASERLLKNYFNCIMDR 48


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 150 WRRNASRNEAVYPPIRRHHFKNQLGV 175
           W R    N  +Y P     ++ QL V
Sbjct: 285 WERETGHNAPLYSPSSDSQYQKQLNV 310


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 11/48 (22%), Positives = 21/48 (43%)

Query: 182 FFSFKFQPNLNSREEIERFRTSVDDISCDKVTQRLGLVKPYYDIRLEK 229
           F  F     L+     +++ T  D++  D++     L+  Y +  LEK
Sbjct: 16  FSDFVNGKTLHRSTRDDKYTTRYDNVDVDRILHSKRLLLNYINCLLEK 63


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 170 KNQLGVPKKNYFFFSF 185
           K +L   K +YF+FSF
Sbjct: 45  KGELKQHKSDYFYFSF 60


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 170 KNQLGVPKKNYFFFSF 185
           K +L   K +YF+FSF
Sbjct: 45  KGELKQHKSDYFYFSF 60


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.131    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,414
Number of Sequences: 317
Number of extensions: 1979
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 240
length of database: 114,650
effective HSP length: 55
effective length of query: 185
effective length of database: 97,215
effective search space: 17984775
effective search space used: 17984775
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 42 (21.0 bits)