Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001729-TA|BGIBMGA001729-PA|undefined
(240 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49013| Best HMM Match : IBB (HMM E-Value=1.6) 32 0.37
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 32 0.49
SB_30745| Best HMM Match : UIM (HMM E-Value=1.9) 32 0.49
SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38) 30 1.5
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 30 2.0
SB_9285| Best HMM Match : Ribosomal_S30AE (HMM E-Value=4.8) 29 2.6
SB_58071| Best HMM Match : Death (HMM E-Value=8.4e-12) 29 3.4
SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 28 6.0
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 28 6.0
SB_44575| Best HMM Match : DUF444 (HMM E-Value=0.84) 28 7.9
SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 28 7.9
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_49013| Best HMM Match : IBB (HMM E-Value=1.6)
Length = 216
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 87 AETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGKRR 146
A++ + D + K E +L E+YKD + R+ A + +TV EE A+ +A K+R
Sbjct: 30 AQSKSWDNDTKKKFEGKLLELYKDTVEDSVKRNVAVENPSTVDSEEKE--AKKKAEKKKR 87
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 88 ETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGKRRQ 147
+++ SS+D E +RE E K N + +S+ SSS + + A+S+ + K ++
Sbjct: 242 DSSESSIDSED--DRERKERKKKNKKEKKHKSKETSSSESNKSSDSEEKAKSKKNKKDKK 299
Query: 148 TD---WRRNASRNEAVYPPIRRHHFKN 171
D ++++ + PPI + F N
Sbjct: 300 NDKDSSKKSSVKGTEETPPITANKFNN 326
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 31.9 bits (69), Expect = 0.49
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 87 AETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGKRR 146
A + S D + + + Y N+DY +++E DS H+ EG+ + S RR
Sbjct: 2 ASSEQQSADQQLALAMAYSNAYSKNTDY--NKAEDDSR----HQREGSRDSDREDSDSRR 55
Query: 147 Q------TDWRRNASRNEAVYPPIRRHHFKNQLGVPKKNYFFFSFKFQ 188
+ D +R+ Y P + G P+K F + F+
Sbjct: 56 RGGNFERNDLKRDRESTSRRYTPYDTNRRSRSSGAPEKKVFVSNIPFE 103
>SB_30745| Best HMM Match : UIM (HMM E-Value=1.9)
Length = 116
Score = 31.9 bits (69), Expect = 0.49
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 87 AETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGKRR 146
A + S D + + + Y N+DY +++E DS H+ EG+ + S RR
Sbjct: 2 ASSEQQSADQQLALAMAYSNAYSKNTDY--NKAEDDSR----HQREGSRDSDREDSDSRR 55
Query: 147 Q------TDWRRNASRNEAVYPPIRRHHFKNQLGVPKKNYFFFSFKFQ 188
+ D +R+ Y P + G P+K F + F+
Sbjct: 56 RGGNFERNDLKRDRESTSRRYTPYDTNRRSRSSGAPEKKVFVSNIPFE 103
>SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38)
Length = 1523
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 91 NSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKE 131
N+ DD+ + E + Y DN D D +ADS T+ K+
Sbjct: 1278 NNEHDDDHDFDDENDDDYDDNDDDDGDSDDADSDKTSSQKD 1318
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/72 (25%), Positives = 32/72 (44%)
Query: 109 KDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGKRRQTDWRRNASRNEAVYPPIRRHH 168
K D R + S S ++ + + +RSR+S +RR++ R R + RR H
Sbjct: 295 KSKRDRSRSRDRSSSKSKSLRRSKKYSRSRSRSSERRRRSRSRSTEHRYRSRSRSPRRKH 354
Query: 169 FKNQLGVPKKNY 180
++ P + Y
Sbjct: 355 RRSTSTSPSRRY 366
>SB_9285| Best HMM Match : Ribosomal_S30AE (HMM E-Value=4.8)
Length = 174
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 100 IERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNL-IARSRASGKRRQTD 149
+++E+ + DN+D+ T + D+ + H EE NL R R SG+ R+ +
Sbjct: 114 LKKEIGQFGDDNNDFSTAEDD-DARNRLRHIEEENLKRQRERRSGRSRRQE 163
>SB_58071| Best HMM Match : Death (HMM E-Value=8.4e-12)
Length = 633
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 6/113 (5%)
Query: 15 AVAKNNNVKTLTESLGREIIEID--NPIKELPPGLEEEPSAENDEDGTSATLRPXXXXXX 72
A+ KN N +L + E I+ID N + + E+ E E+G +
Sbjct: 79 AITKNENETSLEQEEFSENIDIDVTNVVNQENAKEEDSDDRETGEEGKAVKPDSGKESTE 138
Query: 73 XXXXXXXXXXXXXRAET----TNSSVDDEAKIERELAEMYKDNSDYQTDRSEA 121
R E T +D+EAK + + + N D Q D SE+
Sbjct: 139 VDAGSEDNEFFDCRDEASANKTQMQIDEEAKTFPDDTAVEQQNDDKQEDMSES 191
>SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 94 VDDEAKIERELAEMYKDNSDYQTD--RSEADSSSTTVHKEEGNLIARSRASGKRRQTD-- 149
++D K+ + Y D + R +++ KEE N ++ +++ ++T
Sbjct: 20 MNDLEKVLSDYTRSYYDAAPIHASFQRKSPTKVASSPEKEENNDLSENKSLSDHQETQVQ 79
Query: 150 -WRRNASRNEAVYPPIRRH 167
W RNAS N + I H
Sbjct: 80 KWHRNASHNSTSWQNINIH 98
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/62 (20%), Positives = 27/62 (43%)
Query: 97 EAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGKRRQTDWRRNASR 156
+ K+ ++ K +++ D S+A SS +EE + + KR++ D +
Sbjct: 208 DQKMRDKVRNKLKKSTNLAEDASQASGSSDKTLREESRRLQKELVGAKRKRVDAENQTEK 267
Query: 157 NE 158
E
Sbjct: 268 KE 269
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 109 KDNS-DYQTDRSEADSSSTTVHKEEGNLIARSRASGKRRQTDWRRNASRNEAVYPPIRRH 167
KD + D + DR + S ST K +RSR+ K R+ R+ SR+ RR
Sbjct: 189 KDKAQDTEKDRKSSRSPSTDKRKSRSRSRSRSRSHRKSRKRSESRSRSRSPKKSRSARRS 248
Query: 168 HFKNQLGVPKKN 179
+ P+++
Sbjct: 249 RSPQKSRSPQRS 260
>SB_44575| Best HMM Match : DUF444 (HMM E-Value=0.84)
Length = 451
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 11 TIHLAVAKNNNVKTLTESLGREIIEIDNPIKELPPGLEEEPSAENDE 57
TI AV N K + + +G + E + ELPP +EE+ + E++E
Sbjct: 122 TITAAVPVNQEEKLVKKGVGVQARETE----ELPPEMEEDDNTEDEE 164
>SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 961
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 88 ETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGK 144
E ++ + +IE AE+ K ++ + RS+ + T+ + + AR+RA+G+
Sbjct: 154 ELLKAAQTQDQEIESLRAELRKSKAELKAGRSQNEDYKKTLELLQDRIKARARAAGQ 210
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/141 (17%), Positives = 51/141 (36%), Gaps = 4/141 (2%)
Query: 40 IKELPPGLEEEPSAENDEDGTSATLRPXXXXXXXXXXXXXXXXXXXRAETTNSSVDDEAK 99
++++ LEE+ E +++ L R E + + K
Sbjct: 139 MEQIAMELEEKRKEEEEKEKQRKQLEVEKQKRLEEERIRSQNEERKRREREQKEREKQQK 198
Query: 100 IERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGKRRQTDWRRNASRNEA 159
++ E E + + + R E + V KE+ ++ + KR+Q R + +
Sbjct: 199 LDMEKEERRRRQQEEEKKRREEEEKRKKVEKEKQEREKAAKKNIKRQQQQQRTDQQQYPR 258
Query: 160 VYPP----IRRHHFKNQLGVP 176
PP ++R + QL P
Sbjct: 259 EIPPRFQKMKRQQQQQQLQTP 279
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 86 RAETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGKR 145
+A+ +SS DD + E E + DN +T + SS +E + +A K
Sbjct: 174 QAKQESSSEDDSSDEEDEKPKKKADNKGKKTQAKQESSSEEDDSSDEEEEKPKKKADDKV 233
Query: 146 RQTDWRRNASRNE 158
++T ++ +S +
Sbjct: 234 KKTPAKQESSSED 246
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 27.9 bits (59), Expect = 7.9
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Query: 87 AETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGKRR 146
+E +S DE E E Y + T SE D+SS T K + R+ + +R
Sbjct: 322 SEYLSSEESDEDVNEEFDLEKYIRKLERGTSSSEDDASSVTSEKLINRAVLRATKNFRRA 381
Query: 147 QTDWRRNASRNEAVYPPIRRHHFKNQLGVPKKNYFFFSFKFQPNLNSREEIERFRTSVDD 206
D + S +E+ + PKK S Q + +S EE + F DD
Sbjct: 382 NVDTVKQNSDSESSDSEPEVEPKPKKEKPPKKEQ---SGSEQSSGSSSEETDSFLDFTDD 438
Query: 207 IS 208
S
Sbjct: 439 ES 440
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.131 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,462,297
Number of Sequences: 59808
Number of extensions: 284376
Number of successful extensions: 765
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 751
Number of HSP's gapped (non-prelim): 22
length of query: 240
length of database: 16,821,457
effective HSP length: 80
effective length of query: 160
effective length of database: 12,036,817
effective search space: 1925890720
effective search space used: 1925890720
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
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