Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001729-TA|BGIBMGA001729-PA|undefined
(240 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.5
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 2.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 4.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 4.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 4.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 4.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 4.4
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.4
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 4.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 4.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 4.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 4.4
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 8 VLLTIHLAVAKNNNVKTLTESLGREIIEIDNPIKELPPGLEEEPS 52
+L+ HL+ N N + +L E+ + +PP EP+
Sbjct: 669 ILMIEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHVPPRWIVEPT 713
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic
acetylcholine receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 4 IHFLVLLTIHLAVAKNNNVKTLTESLGREIIEIDNPI 40
+ FL L +H AVA N + K L + L ++ P+
Sbjct: 11 VWFLSALVVHGAVAGNPDAKRLYDDLLSNYNKLVRPV 47
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic
acetylcholine receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 4 IHFLVLLTIHLAVAKNNNVKTLTESLGREIIEIDNPI 40
+ FL L +H AVA N + K L + L ++ P+
Sbjct: 11 VWFLSALVVHGAVAGNPDAKRLYDDLLSNYNKLVRPV 47
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 183 FSFKFQPNLNSREEIERFRTSVDD 206
F+FKF + NS E+F+ +D+
Sbjct: 319 FNFKFITDANSSSTPEQFKVIIDN 342
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128
+IE+ +E K S DRS A ++S TV
Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.313 0.131 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,123
Number of Sequences: 429
Number of extensions: 3039
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of query: 240
length of database: 140,377
effective HSP length: 56
effective length of query: 184
effective length of database: 116,353
effective search space: 21408952
effective search space used: 21408952
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 43 (21.4 bits)
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