BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001729-TA|BGIBMGA001729-PA|undefined (240 letters) Database: bee 429 sequences; 140,377 total letters Searching.....................................................done Score E Sequences producing significant alignments: (bits) Value AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.1 DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.5 DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.5 AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 2.5 AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 4.4 AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 4.4 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.4 AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 4.4 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 4.4 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 4.4 AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.4 AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 4.4 AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.4 AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.4 AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 4.4 AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 4.4 AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 4.4 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 24.2 bits (50), Expect = 1.1 Identities = 11/45 (24%), Positives = 20/45 (44%) Query: 8 VLLTIHLAVAKNNNVKTLTESLGREIIEIDNPIKELPPGLEEEPS 52 +L+ HL+ N N + +L E+ + +PP EP+ Sbjct: 669 ILMIEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHVPPRWIVEPT 713 >DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 23.0 bits (47), Expect = 2.5 Identities = 12/37 (32%), Positives = 19/37 (51%) Query: 4 IHFLVLLTIHLAVAKNNNVKTLTESLGREIIEIDNPI 40 + FL L +H AVA N + K L + L ++ P+ Sbjct: 11 VWFLSALVVHGAVAGNPDAKRLYDDLLSNYNKLVRPV 47 >DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 23.0 bits (47), Expect = 2.5 Identities = 12/37 (32%), Positives = 19/37 (51%) Query: 4 IHFLVLLTIHLAVAKNNNVKTLTESLGREIIEIDNPI 40 + FL L +H AVA N + K L + L ++ P+ Sbjct: 11 VWFLSALVVHGAVAGNPDAKRLYDDLLSNYNKLVRPV 47 >AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase protein. Length = 588 Score = 23.0 bits (47), Expect = 2.5 Identities = 9/24 (37%), Positives = 15/24 (62%) Query: 183 FSFKFQPNLNSREEIERFRTSVDD 206 F+FKF + NS E+F+ +D+ Sbjct: 319 FNFKFITDANSSSTPEQFKVIIDN 342 >AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex determiner protein. Length = 406 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 >AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 >AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 >AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex determiner protein. Length = 419 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 >AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 >AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 >AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 >AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 >AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex determiner protein. Length = 385 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 >AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex determiner protein. Length = 425 Score = 22.2 bits (45), Expect = 4.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 99 KIERELAEMYKDNSDYQTDRSEADSSSTTV 128 +IE+ +E K S DRS A ++S TV Sbjct: 71 EIEKLGSERSKSRSPDSRDRSNASNTSKTV 100 Database: bee Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 140,377 Number of sequences in database: 429 Lambda K H 0.313 0.131 0.364 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 68,123 Number of Sequences: 429 Number of extensions: 3039 Number of successful extensions: 17 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of query: 240 length of database: 140,377 effective HSP length: 56 effective length of query: 184 effective length of database: 116,353 effective search space: 21408952 effective search space used: 21408952 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.9 bits) S2: 43 (21.4 bits)
- SilkBase 1999-2023 -