GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001728-TA|BGIBMGA001728-PA|IPR011013|Galactose
mutarotase-like, IPR011682|Glycosyl hydrolases 38, C-terminal
         (673 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.42 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    27   0.55 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    26   0.73 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    26   0.73 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   3.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   5.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   9.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   9.0  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 0.42
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 526 GETNEFSALKKKLPLGIHLLSIEQWNEATVLIRLENYLEKSDAIRSGIKRVYLRDV 581
           G   +F+ALK K P    L++I  WNE +V     NY +   A  S ++ V+++ V
Sbjct: 77  GNLKKFNALKLKNPNLKTLVAIGGWNEGSV-----NYSKM--AASSSLRAVFIKSV 125


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 26.6 bits (56), Expect = 0.55
 Identities = 10/28 (35%), Positives = 19/28 (67%)

Query: 486 MNHKPNMIYEKRLAKEISLEPKVLVSEY 513
           MN+K NM+  K + + I +E K++V ++
Sbjct: 1   MNNKLNMVLVKSMLQRIKMEEKLVVEKF 28


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 26.2 bits (55), Expect = 0.73
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 555 VLIRLENYLEKSDAIRSGIKRVYLRDVFVNLRIRSIAECALGGNV 599
           +LI+L N L +   +++ ++R+Y    F  L +R++  C  GG V
Sbjct: 302 ILIQLFNSLRQ---MKNNLERIYFYWSFGFLIVRTVCLCLFGGKV 343


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 26.2 bits (55), Expect = 0.73
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 555 VLIRLENYLEKSDAIRSGIKRVYLRDVFVNLRIRSIAECALGGNV 599
           +LI+L N L +   +++ ++R+Y    F  L +R++  C  GG V
Sbjct: 302 ILIQLFNSLRQ---MKNNLERIYFYWSFGFLIVRTVCLCLFGGKV 343


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 555 VLIRLENYLEKSDAIRSGIKRVYLRDVFVNLRIRSIAECALGGNVWLKDWSPL 607
           +LI+L N L +   +R+ ++R+Y    F  L  R +  C  G  V  +   PL
Sbjct: 300 ILIQLFNSLRR---MRNDLERLYFYWSFALLITRIVCLCLFGAKVHDESIKPL 349


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query: 609 WNKKTEFMRSFNEYYGRSNTSTVYADEPRMLSEGSLEKGLTLRPQQI 655
           W+K T   + F      SN+S  +A++       S E    ++P+ +
Sbjct: 548 WDKFTNMQQQFAYIDESSNSSNYFANKTYDFHNMSFENDFIIQPKHL 594


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query: 467 TEYDRGLIVRGKHILYAT 484
           T + RG I+ G HIL AT
Sbjct: 275 TNHQRGRILGGCHILVAT 292


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 97  VTSTARTANRIVYGDFGRHKNYTDGYVITPRPR 129
           + S+  + NR  YGDF    +   GY+  P  R
Sbjct: 347 IESSILSPNRNYYGDFHNMGHILIGYIHDPDHR 379


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.136    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,207
Number of Sequences: 317
Number of extensions: 6261
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 8
length of query: 673
length of database: 114,650
effective HSP length: 61
effective length of query: 612
effective length of database: 95,313
effective search space: 58331556
effective search space used: 58331556
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)