Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001728-TA|BGIBMGA001728-PA|IPR011013|Galactose
mutarotase-like, IPR011682|Glycosyl hydrolases 38, C-terminal
(673 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23483| Best HMM Match : Glyco_hydro_38C (HMM E-Value=0) 167 3e-41
SB_40313| Best HMM Match : Glyco_hydro_38 (HMM E-Value=0) 166 6e-41
SB_6478| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.7
SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.0
SB_10945| Best HMM Match : Pinin_SDK_memA (HMM E-Value=8.9) 31 4.0
SB_10926| Best HMM Match : Pkinase (HMM E-Value=3e-24) 29 9.2
>SB_23483| Best HMM Match : Glyco_hydro_38C (HMM E-Value=0)
Length = 965
Score = 167 bits (406), Expect = 3e-41
Identities = 141/462 (30%), Positives = 237/462 (51%), Gaps = 65/462 (14%)
Query: 207 YVVSKDMFISNKYIRINLD-STRKITNLT-LSNNVFLALDVQFYYYASDKPTDTGRTDKK 264
+ V I N++I++ T ++T++T L + V +D QF +Y + D G+
Sbjct: 525 FAVDPSTVIQNEFIKLEFSRDTGRLTSMTDLVSEVTTQVDQQFLWYNAS--VDQGQPS-- 580
Query: 265 NPGVYLFRPVDSNPIPILDFIETI--VYKTRVVEEIHCAYSDYVSFVARLYTDLPYIEVD 322
G Y+FRP S+ P+ + VY+ +V+E+ +S YVS V RLY + E +
Sbjct: 581 --GAYIFRPNTSSTTPVNAGGKATFTVYQGPLVQEVRQVFSPYVSQVVRLYYGQKHAEFE 638
Query: 323 WVVGPVPVEDGWGKDVFLRYTTDLGNDGAFYTDANGRQTLKRLRNLRATYEPKSSKIXXX 382
+ VGP+P D G++V R+ +D+ ++ FYTDANGR+ R R+ R T++ +++
Sbjct: 639 YTVGPIP--DDLGREVITRFDSDIKSNKVFYTDANGREMQLRTRDFRPTWKLNNTEPVAG 696
Query: 383 XXXXXXXXXXVTDKPFQYPCFIFPGNLYPVTSKIYIEDEQKNLRFSIFNDRAQGGTSLTD 442
YP V S+I+++D + L ++ DR+ GG+SL D
Sbjct: 697 N---------------YYP----------VNSRIFVKDSNRQL--TLLTDRSLGGSSLKD 729
Query: 443 GELDLMIIRRILTDE-TGTEMNLNETEYD-RGLIVRGK-HILYATKMNHKPNMIYEKRLA 499
G ++LM+ RR+L D+ G + LNE+ +GLIVRGK +++ A + + L
Sbjct: 730 GSVELMLHRRLLVDDKRGVDEPLNESGISGKGLIVRGKVNVVLAPPAT---SAATHRELG 786
Query: 500 KEISLEPKVLVSEYGGYGPYLKSKWLGETNE-FSALKKKLPLGIHLLSIEQWNEATVLIR 558
+++ LEP V ++ P KWL + N ++ + ++LP +H+L++E N+ LIR
Sbjct: 787 EQMMLEPIVSFAQ----NPSTVEKWLAKYNSLYTGVARQLPSNVHMLTLETSNQ-YALIR 841
Query: 559 LENYLE-KSDAIRSGIKRVYLRDVFVNLRIRSIAECALGGNVWLKDWSPLRWNKKTEFMR 617
LE+ E D+ S V L+ +F +L + + E L N LKD P++WN ++
Sbjct: 842 LEHQFEADEDSKLSMPVNVSLQGLFTDLEVSKVEELNLAANQLLKDKHPMQWN-----IK 896
Query: 618 SFNEYYGRSNTSTVYADEPRM-LSEGSLEKGLTLRPQQIRTF 658
S + R + S A +P + L+ +E LRP QIRTF
Sbjct: 897 SVRKSRVRVSGS---AKQPSLRLANTPVE----LRPMQIRTF 931
Score = 32.7 bits (71), Expect = 0.99
Identities = 13/30 (43%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 25 AATADHELVFMAENVPPLGFRSYYIERSRT 54
A+ + +EL+F + +PPLGF SY++ S+T
Sbjct: 488 ASNSKYELIFKVK-LPPLGFASYFVNTSKT 516
>SB_40313| Best HMM Match : Glyco_hydro_38 (HMM E-Value=0)
Length = 887
Score = 166 bits (403), Expect = 6e-41
Identities = 127/416 (30%), Positives = 216/416 (51%), Gaps = 52/416 (12%)
Query: 207 YVVSKDMFISNKYIRINLD-STRKITNLT-LSNNVFLALDVQFYYYASDKPTDTGRTDKK 264
+ V I N++I++ T ++T++T L + V +D QF +Y + D G+
Sbjct: 513 FAVDPSTVIQNEFIKLEFSRDTGRLTSMTDLVSEVTTQVDQQFLWYNAS--VDQGQPS-- 568
Query: 265 NPGVYLFRPVDSNPIPILDFIETI--VYKTRVVEEIHCAYSDYVSFVARLYTDLPYIEVD 322
G Y+FRP S+ P+ + VY+ +V+E+ +S YVS V RLY + E +
Sbjct: 569 --GAYIFRPNTSSTTPVNAGGKATFTVYQGPLVQEVRQVFSPYVSQVVRLYYGQKHAEFE 626
Query: 323 WVVGPVPVEDGWGKDVFLRYTTDLGNDGAFYTDANGRQTLKRLRNLRATYEPKSSKIXXX 382
+ VGP+P D G++V R+ +D+ ++ FYTDANGR+ R R+ R T++ +++
Sbjct: 627 YTVGPIP--DDLGREVITRFDSDIKSNKVFYTDANGREMQLRTRDFRPTWKLNNTEPVAG 684
Query: 383 XXXXXXXXXXVTDKPFQYPCFIFPGNLYPVTSKIYIEDEQKNLRFSIFNDRAQGGTSLTD 442
YP V S+I+++D + L ++ DR+ GG+SL D
Sbjct: 685 N---------------YYP----------VNSRIFVKDSNRQL--TLLTDRSLGGSSLKD 717
Query: 443 GELDLMIIRRILTDE-TGTEMNLNETEYD-RGLIVRGK-HILYATKMNHKPNMIYEKRLA 499
G ++LM+ RR+L D+ G + LNE+ +GLIVRGK +++ A + + L
Sbjct: 718 GSVELMLHRRLLVDDKRGVDEPLNESGISGKGLIVRGKVNVVLAPPAT---SAATHRELG 774
Query: 500 KEISLEPKVLVSEYGGYGPYLKSKWLGETNE-FSALKKKLPLGIHLLSIEQWNEATVLIR 558
+++ LEP V ++ P KWL + N ++ + ++LP +H+L++E N+ LIR
Sbjct: 775 EQMMLEPIVSFAQ----NPSTVEKWLAKYNSLYTGVARQLPSNVHMLTLETSNQ-YALIR 829
Query: 559 LENYLE-KSDAIRSGIKRVYLRDVFVNLRIRSIAECALGGNVWLKDWSPLRWNKKT 613
LE+ E D+ S V L+ +F +L + + E L N LKD P++WN K+
Sbjct: 830 LEHQFEADEDSKLSMPVNVSLQGLFTDLEVSKVEELNLAANQLLKDKHPMQWNIKS 885
Score = 32.7 bits (71), Expect = 0.99
Identities = 13/30 (43%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 25 AATADHELVFMAENVPPLGFRSYYIERSRT 54
A+ + +EL+F + +PPLGF SY++ S+T
Sbjct: 476 ASNSKYELIFKVK-LPPLGFASYFVNTSKT 504
>SB_6478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 31.9 bits (69), Expect = 1.7
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 337 DVFLRYTTDLGNDGAFYTDANG 358
+VF+RYTT+LGN G YT G
Sbjct: 120 EVFIRYTTELGNPGQGYTILTG 141
>SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4085
Score = 31.1 bits (67), Expect = 3.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 272 RPVDSNPIPILDFIETIVYKTRVVEEIHCAYSDYVSFVARLYT 314
R +D P + DF+E +V+ R+ +I +YV V RLY+
Sbjct: 313 RKLDKTPESVEDFVEHLVFLARMASDITSLEREYV-IVTRLYS 354
>SB_10945| Best HMM Match : Pinin_SDK_memA (HMM E-Value=8.9)
Length = 280
Score = 30.7 bits (66), Expect = 4.0
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 611 KKTEFMRSF--NEYYGRSNTSTVYADEPRMLSEGSLEKGLTL 650
K + +R+F NE GR +++ ++PRMLSE SL++G +
Sbjct: 52 KSSPSVRTFTNNEAQGRLGPTSLKYEDPRMLSEVSLKEGFQI 93
>SB_10926| Best HMM Match : Pkinase (HMM E-Value=3e-24)
Length = 1102
Score = 29.5 bits (63), Expect = 9.2
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 450 IRRILTDETGTEMNLNETEYDRGLIVRGKHILYATKMNHKPNMIYEKRLAKEISLEPKVL 509
I R+ ++ GT+ L TE + G +VR L A + K + + ++ + + ++
Sbjct: 457 IARLREEKRGTDERLRRTEAESGSLVRTVQSLEAERNREKQSADFLRKDQPWMITKSDII 516
Query: 510 VSEY----GGYGPYLKSKWLG 526
+SE+ G +G L+ ++ G
Sbjct: 517 LSEFVLGTGAWGRVLEGEFRG 537
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,224,223
Number of Sequences: 59808
Number of extensions: 869156
Number of successful extensions: 2448
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2431
Number of HSP's gapped (non-prelim): 11
length of query: 673
length of database: 16,821,457
effective HSP length: 87
effective length of query: 586
effective length of database: 11,618,161
effective search space: 6808242346
effective search space used: 6808242346
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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