GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001728-TA|BGIBMGA001728-PA|IPR011013|Galactose
mutarotase-like, IPR011682|Glycosyl hydrolases 38, C-terminal
         (673 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   4.9  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    25   8.6  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 4.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 587  IRSIAECALGGNVWLKDWSPLRWNKKTE 614
            I +I    +G +   + W+PL WN K++
Sbjct: 2734 IMAIIGAYIGASAAAQSWNPLEWNWKSK 2761


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 24.6 bits (51), Expect = 8.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 538 LPLGIHLLSIEQWNEATVLIRLENYLEKSDAIRSGIKRVYLRDV 581
           L LG+  +S  Q   AT   ++  Y + S+A+R G+ +V + D+
Sbjct: 12  LVLGMLEVSSVQGQNATTGPKVLCYYDGSNALREGLGKVTVSDI 55


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.136    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,753
Number of Sequences: 2123
Number of extensions: 27020
Number of successful extensions: 50
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46
Number of HSP's gapped (non-prelim): 4
length of query: 673
length of database: 516,269
effective HSP length: 69
effective length of query: 604
effective length of database: 369,782
effective search space: 223348328
effective search space used: 223348328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)