GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001727-TA|BGIBMGA001727-PA|IPR000602|Glycoside
hydrolase, family 38
         (322 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    25   0.98 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.1  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 163 HRQAPYYST-RNVMVMMGQRFGYYDASIWFANVDKLIKAESPL 204
           H++ PY +    +M+ +  +      S WFAN  + +K E+ +
Sbjct: 106 HKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM 148


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
          growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 29 HAVIDQFTYSLRKLNATF 46
          +A ID+ TY L  LN  F
Sbjct: 62 YAAIDEETYKLTPLNEQF 79


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 161 ILHRQAPYYSTRNVMVMMGQRFGYYDASIWFANVDKLIKAE 201
           ++   A  Y    ++VM+  RF   +  I F N    +K E
Sbjct: 171 MIFNSALSYKASEIVVMLRSRFAILNKQIRFLNQYLRLKPE 211


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 161 ILHRQAPYYSTRNVMVMMGQRFGYYDASIWFANVDKLIKAE 201
           ++   A  Y    ++VM+  RF   +  I F N    +K E
Sbjct: 189 MIFNSALSYKASEIVVMLRSRFAILNKQIRFLNQYLRLKPE 229


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.139    0.440 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,946
Number of Sequences: 317
Number of extensions: 3660
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 4
length of query: 322
length of database: 114,650
effective HSP length: 57
effective length of query: 265
effective length of database: 96,581
effective search space: 25593965
effective search space used: 25593965
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 43 (21.4 bits)