Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001727-TA|BGIBMGA001727-PA|IPR000602|Glycoside
hydrolase, family 38
(322 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0232 + 2456449-2456652,2456814-2456897,2459113-2459201,245... 138 4e-33
11_05_0014 + 18392622-18392834,18393064-18393147,18393709-183937... 138 7e-33
06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850 69 4e-12
01_06_1181 - 35169729-35169768,35169927-35169994,35170051-35171265 32 0.54
02_01_0234 + 1559899-1559969,1561281-1561333,1561673-1561787,156... 30 2.9
02_01_0107 + 785993-786359,786773-787703,787807-787975,788472-78... 30 2.9
06_03_0434 + 20725996-20726026,20726300-20726947,20727168-207272... 29 5.0
03_05_1078 + 30205876-30206346,30206624-30207001,30207967-302080... 29 5.0
06_01_0246 - 1856617-1856658,1856756-1856797,1856908-1857035,185... 29 6.6
03_05_0525 + 25200207-25200580,25201061-25201751 29 6.6
03_01_0530 + 3971990-3972331,3972415-3972489,3972608-3972661,397... 28 8.8
01_06_0736 - 31585840-31586459,31586545-31587070,31588051-315881... 28 8.8
>10_01_0232 +
2456449-2456652,2456814-2456897,2459113-2459201,
2459245-2459452,2459764-2459883,2460004-2460087,
2460171-2460242,2460342-2460455,2460852-2460952,
2461024-2461117,2461265-2461432,2461539-2461616,
2461908-2461973,2462052-2462108,2462353-2462572,
2462867-2463003,2465379-2465450,2465530-2465577,
2465681-2465806,2465982-2466047,2466508-2466620,
2467348-2467432,2467885-2467980,2468067-2468114,
2468190-2468258,2468393-2468581
Length = 935
Score = 138 bits (335), Expect = 4e-33
Identities = 103/303 (33%), Positives = 147/303 (48%), Gaps = 35/303 (11%)
Query: 4 TLLRQGRLFIVGGAWGMVDEATTNYHAVIDQFTYSLRKLNATFLECGRPLMAWQADVYGH 63
+L + G G W M DEA +Y +IDQ T R + F + P WQ D +GH
Sbjct: 127 SLRKFGNFKFRNGGWCMHDEAAVHYIDMIDQTTLGHRVIKKQFNKI--PRAGWQIDPFGH 184
Query: 64 SREIASLL-AQMGFDGLFINPISFDDELDRMRRKSMEFLWRGSDDLGAETDIYTHKLFDG 122
S LL A++GFD + I + D R K +E +WRGS G+ + I+T+ F
Sbjct: 185 SAVQGYLLGAELGFDSMHFARIDYQDRAKRKGDKGLEVIWRGSRTFGSSSQIFTN-AFPV 243
Query: 123 YWSPP-GFCFGSYCDDPLLITSDSVF--RNIDERVDLFIKSILHRQAPYYSTRNVMVMMG 179
++SPP GF F + DD + + D + N+ ERV+ F+ + L +QA T ++M MG
Sbjct: 244 HYSPPDGFGFEIF-DDFVPVQDDMLLFDYNLKERVNDFVAAAL-KQANVTRTNHIMWTMG 301
Query: 180 QRFGYYDASIWFANVDKLIKAESPLPHVLPDVPLKWSFLYSEVNKKSYETGANINLYYST 239
F Y A WF N+D+LI + VNK ++ YST
Sbjct: 302 DDFNYQYAESWFRNMDRLI---------------------NYVNK-----DGRVHALYST 335
Query: 240 PACYLKAVYDSNPTLDTKQDDFFPMAYDKFSHATGLYTSRPTIKYMAREGHVYLQMAKQL 299
P+ Y A + SN + K DD+FP A K ++ TG +TSRPT K R Y A+QL
Sbjct: 336 PSIYTDAKHASNESWPLKYDDYFPYADAKNAYWTGYFTSRPTFKRYIRMISGYYLAARQL 395
Query: 300 QVL 302
+ L
Sbjct: 396 EFL 398
>11_05_0014 +
18392622-18392834,18393064-18393147,18393709-18393797,
18393889-18394063,18394370-18394489,18394591-18394677,
18394755-18394826,18395166-18395279,18395387-18395487,
18395576-18395669,18395794-18395961,18396287-18396352,
18396475-18396531,18396708-18396927,18397015-18397151,
18397573-18397641,18397722-18397781,18397927-18397998,
18398171-18398218,18398376-18398495,18398743-18398808,
18399341-18399453,18399821-18399905,18400246-18400356,
18400436-18400531,18401075-18401143,18401235-18401453
Length = 974
Score = 138 bits (333), Expect = 7e-33
Identities = 102/312 (32%), Positives = 144/312 (46%), Gaps = 32/312 (10%)
Query: 1 MVYTLLRQGRLFIVGGAWGMVDEATTNYHAVIDQFTYSLRKLNATFLECGRPLMAWQADV 60
+V L+ GRL ++ G M DEAT +Y +IDQ T R + F + P + WQ D
Sbjct: 116 IVKGLISTGRLELINGGMCMHDEATVHYIDMIDQTTLGHRFIKEEFGQI--PRIGWQIDP 173
Query: 61 YGHSREIASLLA-QMGFDGLFINPISFDDELDRMRRKSMEFLWRGSDDLGAETDIYTHKL 119
+GHS A LL ++GFD + I + D R K +E +WRGS G+ DI+
Sbjct: 174 FGHSAVQAYLLGTEVGFDAFYFFRIDYQDRDTRKGTKELEVVWRGSKTFGSSADIFAGIF 233
Query: 120 FDGYWSPPGFCFGSYCDDPLLITSDSVF--RNIDERVDLFIKSILHRQAPYYSTRNVMVM 177
Y PPG + D ++ D + N+++RVD F+ + + QA T +VM
Sbjct: 234 PKNYEPPPGQFYFEVDDTSPIVQDDPLLFDYNVEQRVDDFVAAAI-AQANITRTNHVMFT 292
Query: 178 MGQRFGYYDASIWFANVDKLIKAESPLPHVLPDVPLKWSFLYSEVNKKSYETGANINLYY 237
MG F Y A WF +DKLI H VNK +N Y
Sbjct: 293 MGTDFKYQYAESWFRQMDKLI-------HY--------------VNK-----DGRVNALY 326
Query: 238 STPACYLKAVYDSNPTLDTKQDDFFPMAYDKFSHATGLYTSRPTIKYMAREGHVYLQMAK 297
STP+ Y A + N K +DFFP A + ++ TG +TSRP +K R Y A+
Sbjct: 327 STPSIYTDAKHAENVPWPLKTNDFFPYADNPNAYWTGYFTSRPALKRYVRVMSGYYLAAR 386
Query: 298 QLQVLARLWNND 309
QL+ N+D
Sbjct: 387 QLEFFKGRSNSD 398
>06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850
Length = 1173
Score = 69.3 bits (162), Expect = 4e-12
Identities = 79/303 (26%), Positives = 124/303 (40%), Gaps = 42/303 (13%)
Query: 5 LLRQGRLFIVGGAWGMVDEATTNYHAVIDQFTYSLRKLNATFLECGRPLMAWQADVYGHS 64
L+R G+L IV G W M DE + D P +W D +G+S
Sbjct: 237 LVRDGQLEIVSGGWVMNDEMMEGNMWLNDTIGVV-------------PKNSWSIDPFGYS 283
Query: 65 REIASLLAQMGFDGLFINPISFDDELDRMRRKSMEFLWRGSDDLGAETDIYTHKL-FDGY 123
+A LL +MGF + I ++ + + K++E+LWR + D+ TDI+ H + F Y
Sbjct: 284 ATMAYLLRRMGFHNMLIQRTHYELKKELAMNKNLEYLWRQNWDIDETTDIFVHMMPFYSY 343
Query: 124 WSP------PGFC----FG-----SYCDDPLLITS-DSVFRNIDERVDLFIKSILHRQAP 167
P P C F SY P ++ N+ ER + + +++
Sbjct: 344 DIPHTCGPEPAICCQFDFARMRSFSYESCPWRFDPVETNANNVQERA-MKLLDQYRKKST 402
Query: 168 YYSTRNVMVMMGQRFGYY---DASIWFANVDKLIKAESPLPHVLPDVPLKWSFLYSEVNK 224
Y T +++ +G F Y +A F N +KL + PH+ +V K+ L +
Sbjct: 403 LYRTNTLLIPLGDDFRYVSTEEAEAQFRNYEKLFDYINSNPHLKAEV--KFGTL-EDYFS 459
Query: 225 KSYETGANINLYYSTPACYLKAVYDSNPTLDTKQDDFFPMAYDKFSHATGLYTSRPTIKY 284
+ IN Y+ P + V P T DFF A + +G Y SRP K
Sbjct: 460 TLRDEAERIN--YTRPG---ELVSSELPGFPTLSGDFFTYADRNQDYWSGYYVSRPYFKA 514
Query: 285 MAR 287
+ R
Sbjct: 515 VDR 517
>01_06_1181 - 35169729-35169768,35169927-35169994,35170051-35171265
Length = 440
Score = 32.3 bits (70), Expect = 0.54
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 120 FDGYWSPPGFCFGSYCDDPLLI-----TSDSVFRNIDERVDLFIKSILHRQAPYY 169
FD P CFG +C + L DS F N+D R F+++ H + P+Y
Sbjct: 300 FDALMKAPDSCFGRFCREKYLAILPPSMEDSFFGNLDHR--SFVENGGHPRTPFY 352
>02_01_0234 +
1559899-1559969,1561281-1561333,1561673-1561787,
1562073-1562195,1562558-1562729,1562815-1563000
Length = 239
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 33 DQFTYSLRKLNATFLECGRPLMAWQADVYGHS--REIASLLA---QMGFDGLFINPISFD 87
D+ T S L A F+ G + +ADV+G E+++ L + FDG++ +P+ D
Sbjct: 158 DKSTQSGPTLRARFIGQGYKQVCGRADVWGDGVVPEVSAHLEGALNISFDGVYHSPVGSD 217
Query: 88 DE 89
DE
Sbjct: 218 DE 219
>02_01_0107 +
785993-786359,786773-787703,787807-787975,788472-788588,
788815-788961
Length = 576
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 38 SLRKLNATFLECGRPLMAWQADVYGHSREIASLLAQMGFDGLFINPISFDDELDR--MRR 95
+LRK++ T E G + + + V + + + Q G D + NPI +D+L + +
Sbjct: 461 TLRKVSVTVGENGITMASRRPRVTLRGTKFSLPMPQGGRDAITKNPILREDQLPQKVLHP 520
Query: 96 KSMEFLWRGSDDLGAETDIYTH 117
KS + + D LG E DI++H
Sbjct: 521 KSKKSNKQDDDFLGVE-DIFSH 541
>06_03_0434 +
20725996-20726026,20726300-20726947,20727168-20727230,
20727300-20727458,20727750-20728247,20729068-20729321,
20729448-20729829,20729938-20730204,20730530-20730789
Length = 853
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Query: 185 YDASIWFANVDKLIKA---ESPLPHVLPDVPLKWSFLYSEVNKKSYETGANINLYYSTPA 241
YD W N D I+ + P +P+ P +YS + ++++ N + P
Sbjct: 244 YDDQAWEINEDVEIQDVVDDIPESFGIPETPDTSEIVYSNIPQRTHMLKPVENCEFCDPK 303
Query: 242 CYLKAVYDSNPTLDTKQDDFFPMAYDKFSHATGL 275
YD +P+L+ + P Y++ G+
Sbjct: 304 HLQLYFYDDDPSLEHRYRRCHPELYEQDKDVIGI 337
>03_05_1078 +
30205876-30206346,30206624-30207001,30207967-30208092,
30209569-30209805
Length = 403
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 170 STRNVMVMMGQRFGYYDASIWFANVDKLIKAESPLPHVL--PDVPLKWSFLYSEVNKKSY 227
S+R MM +R S +A++ ++ + S L +V P +PLKWS + +KK +
Sbjct: 124 SSRGFRHMMRERQRREKLSQSYADLYAMVSSRSKLQNVRNPPLIPLKWSVYQNRADKKPF 183
>06_01_0246 -
1856617-1856658,1856756-1856797,1856908-1857035,
1857311-1857518,1857617-1857797,1858227-1858271,
1858565-1858918,1860282-1860325
Length = 347
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 221 EVNKKSYETGANINLYYSTPACYLKAVYDSNPTLDTKQDD 260
++ KS + +++N Y CY+K +YD+ + D+++D+
Sbjct: 284 KIGNKSMKHPSDVNSYVGGH-CYIKGIYDTIVSSDSEEDE 322
>03_05_0525 + 25200207-25200580,25201061-25201751
Length = 354
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 265 AYDKFSHATGLYTSRPTIKYMAREGHVYLQMAKQLQVLARLWNNDQLFEEFQWVM 319
+Y H +Y SRP + + E VYL + + +W D+ +F+WV+
Sbjct: 132 SYQVIHHPIEVYKSRPYVYFGKSEKGVYL-ASLTIDGRLSIWVLDESCGQFKWVL 185
>03_01_0530 +
3971990-3972331,3972415-3972489,3972608-3972661,
3972747-3972825,3972927-3973054,3973178-3973261,
3973344-3973427,3973518-3973669,3973810-3973960,
3974675-3974746,3975708-3975749
Length = 420
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 3 YTLLRQGRLFIVGGAWGMVDEATTNYHAVIDQFTYSLRKLNATF 46
YT+ ++ L + GG W +V++ N + + YSL K TF
Sbjct: 318 YTIGQRQGLRLPGGPWYVVEKGVQNNVVFVSRNYYSLDKRRRTF 361
>01_06_0736 -
31585840-31586459,31586545-31587070,31588051-31588149,
31589344-31589427,31589458-31589775,31589907-31590113
Length = 617
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 297 KQLQVLARLWNNDQLFEEFQWVMGN 321
++LQ L LW N L + W++GN
Sbjct: 179 RKLQSLCELWYNGTLLVGWMWILGN 203
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.324 0.139 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,974,986
Number of Sequences: 37544
Number of extensions: 423186
Number of successful extensions: 950
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 934
Number of HSP's gapped (non-prelim): 17
length of query: 322
length of database: 14,793,348
effective HSP length: 82
effective length of query: 240
effective length of database: 11,714,740
effective search space: 2811537600
effective search space used: 2811537600
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 60 (28.3 bits)
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