Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001726-TA|BGIBMGA001726-PA|IPR000573|Aconitate
hydratase, C-terminal
(284 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g05710.1 68415.m00611 aconitate hydratase, cytoplasmic, putat... 353 1e-97
At4g35830.1 68417.m05090 aconitate hydratase, cytoplasmic / citr... 347 5e-96
At4g26970.1 68417.m03881 aconitate hydratase, cytoplasmic, putat... 342 1e-94
At5g54950.1 68418.m06844 aconitate hydratase-related / citrate h... 49 3e-06
At3g58990.1 68416.m06575 aconitase C-terminal domain-containing ... 38 0.008
At2g43100.1 68415.m05350 aconitase C-terminal domain-containing ... 38 0.008
At2g43090.1 68415.m05348 aconitase C-terminal domain-containing ... 36 0.031
At4g33945.1 68417.m04817 armadillo/beta-catenin repeat family pr... 29 2.7
At3g59770.1 68416.m06670 sacI homology domain-containing protein... 28 6.2
At2g07690.1 68415.m00993 minichromosome maintenance family prote... 28 6.2
At3g11964.1 68416.m01479 S1 RNA-binding domain-containing protei... 28 8.2
>At2g05710.1 68415.m00611 aconitate hydratase, cytoplasmic, putative
/ citrate hydro-lyase/aconitase, putative nearly
identical to SP|P49608 Aconitate hydratase, cytoplasmic
(EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase)
{Cucurbita maxima}; contains Pfam profiles PF00330:
Aconitase family (aconitate hydratase), PF00694:
Aconitase C-terminal domain
Length = 990
Score = 353 bits (867), Expect = 1e-97
Identities = 169/279 (60%), Positives = 204/279 (73%), Gaps = 4/279 (1%)
Query: 9 YARIEQGSAAWQALDVPRGRLYSWDANSTYIKKPPFFDGMTKELPAATSVRGARCLLLLG 68
Y I +G+ W L VP LYSWD NSTYI +PP+F MT + P +V+ A CLL G
Sbjct: 709 YESITKGNPMWNKLSVPENTLYSWDPNSTYIHEPPYFKDMTMDPPGPHNVKDAYCLLNFG 768
Query: 69 DSVTTDHISPAGSIARNSPAARYLAQRGLTAREFNSYGSRRGNDAVMSRGTFANIRIVNK 128
DS+TTDHISPAG+I ++SPAA++L +RG+ ++FNSYGSRRGND +M+RGTFANIRIVNK
Sbjct: 769 DSITTDHISPAGNIQKDSPAAKFLMERGVDRKDFNSYGSRRGNDEIMARGTFANIRIVNK 828
Query: 129 -MAPAPGPKTTHHPSGDVMDIFDAAERYASEDVPLIAIVGKDYGSGSSRDWAAKGPYLLG 187
M GPKT H PSG+ + +FDAA RY S I + G +YGSGSSRDWAAKGP L G
Sbjct: 829 LMNGEVGPKTVHIPSGEKLSVFDAAMRYKSSGEDTIILAGAEYGSGSSRDWAAKGPMLQG 888
Query: 188 IKAVIAESFERIHRSNLVGMGLLPLQFLPGESAATLGLTGAERYDIILPPALA---PGQT 244
+KAVIA+SFERIHRSNLVGMG++PL F GE A TLGLTG ERY I LP ++ PGQ
Sbjct: 889 VKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIHLPTDISEIRPGQD 948
Query: 245 ATVQVDNGTSFQVVVRFDTEVDLTYFKNGGILNYMVRKM 283
TV DNG SF VRFDTEV+L YF +GGIL Y++R +
Sbjct: 949 VTVTTDNGKSFTCTVRFDTEVELAYFNHGGILPYVIRNL 987
>At4g35830.1 68417.m05090 aconitate hydratase, cytoplasmic / citrate
hydro-lyase / aconitase (ACO) identical to SP|Q42560
Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate
hydro-lyase) (Aconitase) {Arabidopsis thaliana};
contains Pfam profiles PF00330: Aconitase family
(aconitate hydratase), PF00694: Aconitase C-terminal
domain
Length = 898
Score = 347 bits (853), Expect = 5e-96
Identities = 165/280 (58%), Positives = 203/280 (72%), Gaps = 4/280 (1%)
Query: 9 YARIEQGSAAWQALDVPRGRLYSWDANSTYIKKPPFFDGMTKELPAATSVRGARCLLLLG 68
Y I +G++ W L V G LY WD STYI +PP+F GMT P V+ A CLL G
Sbjct: 617 YEAITKGNSMWNQLSVASGTLYEWDPKSTYIHEPPYFKGMTMSPPGPHGVKDAYCLLNFG 676
Query: 69 DSVTTDHISPAGSIARNSPAARYLAQRGLTAREFNSYGSRRGNDAVMSRGTFANIRIVNK 128
DS+TTDHISPAGSI ++SPAA+YL +RG+ R+FNSYGSRRGND +M+RGTFANIRIVNK
Sbjct: 677 DSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRIVNK 736
Query: 129 -MAPAPGPKTTHHPSGDVMDIFDAAERYASEDVPLIAIVGKDYGSGSSRDWAAKGPYLLG 187
+ GPKT H P+G+ + +FDAA +Y +E I + G +YGSGSSRDWAAKGP LLG
Sbjct: 737 HLKGEVGPKTVHIPTGEKLSVFDAAMKYRNEGRDTIILAGAEYGSGSSRDWAAKGPMLLG 796
Query: 188 IKAVIAESFERIHRSNLVGMGLLPLQFLPGESAATLGLTGAERYDIILP---PALAPGQT 244
+KAVI++SFERIHRSNLVGMG++PL F GE A TLGLTG E Y I LP + PGQ
Sbjct: 797 VKAVISKSFERIHRSNLVGMGIIPLCFKAGEDAETLGLTGQELYTIELPNNVSEIKPGQD 856
Query: 245 ATVQVDNGTSFQVVVRFDTEVDLTYFKNGGILNYMVRKML 284
TV +NG SF +RFDTEV+L YF +GGIL Y++R ++
Sbjct: 857 VTVVTNNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 896
>At4g26970.1 68417.m03881 aconitate hydratase, cytoplasmic, putative
/ citrate hydro-lyase/aconitase, putative strong
similarity to SP|P49608 Aconitate hydratase, cytoplasmic
(EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase)
{Cucurbita maxima}; contains Pfam profiles PF00330:
Aconitase family (aconitate hydratase), PF00694:
Aconitase C-terminal domain
Length = 995
Score = 342 bits (841), Expect = 1e-94
Identities = 161/279 (57%), Positives = 199/279 (71%), Gaps = 4/279 (1%)
Query: 9 YARIEQGSAAWQALDVPRGRLYSWDANSTYIKKPPFFDGMTKELPAATSVRGARCLLLLG 68
Y I +G+ W L P LYSWD NSTYI +PP+F MT P V+ A CLL G
Sbjct: 714 YETITEGNPLWNELSAPSSTLYSWDPNSTYIHEPPYFKNMTANPPGPREVKDAYCLLNFG 773
Query: 69 DSVTTDHISPAGSIARNSPAARYLAQRGLTAREFNSYGSRRGNDAVMSRGTFANIRIVNK 128
DSVTTDHISPAG+I + SPAA++L RG+ + +FNSYGSRRGND VM+RGTFANIRIVNK
Sbjct: 774 DSVTTDHISPAGNIQKTSPAAKFLMDRGVISEDFNSYGSRRGNDEVMARGTFANIRIVNK 833
Query: 129 MAPAP-GPKTTHHPSGDVMDIFDAAERYASEDVPLIAIVGKDYGSGSSRDWAAKGPYLLG 187
+ GP T H P+G+ + +FDAA +Y + + I + G +YGSGSSRDWAAKGP LLG
Sbjct: 834 LLKGEVGPNTVHIPTGEKLSVFDAASKYKTAEQDTIILAGAEYGSGSSRDWAAKGPLLLG 893
Query: 188 IKAVIAESFERIHRSNLVGMGLLPLQFLPGESAATLGLTGAERYDIILPPALA---PGQT 244
+KAVIA+SFERIHRSNL GMG++PL F GE A TLGLTG ERY + LP ++ PGQ
Sbjct: 894 VKAVIAKSFERIHRSNLAGMGIIPLCFKAGEDAETLGLTGHERYTVHLPTKVSDIRPGQD 953
Query: 245 ATVQVDNGTSFQVVVRFDTEVDLTYFKNGGILNYMVRKM 283
TV D+G SF +RFDTEV+L Y+ +GGIL Y++R +
Sbjct: 954 VTVTTDSGKSFVCTLRFDTEVELAYYDHGGILPYVIRSL 992
>At5g54950.1 68418.m06844 aconitate hydratase-related / citrate
hydro-lyase-related / aconitase-related similar to
SP|Q42560 Aconitate hydratase, cytoplasmic (EC 4.2.1.3)
(Citrate hydro-lyase) (Aconitase) {Arabidopsis thaliana}
Length = 74
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 212 LQFLPGESAATLGLTGAERYDIILPP---ALAPGQTATVQVDNGTSFQVVVRFDTEV 265
+ F GE A TLGLTG E Y I LP + PGQ TV D SF +R DTE+
Sbjct: 1 MAFKSGEDAETLGLTGHELYTIHLPSNINEIKPGQDITVTTDTAKSFVCTLRLDTEI 57
>At3g58990.1 68416.m06575 aconitase C-terminal domain-containing
protein contains Pfam profile PF00694: Aconitase
C-terminal domain
Length = 253
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 163 IAIVGKDYGSGSSRDWAAKGPYLLGIKAVIAESFERIHRSNLVGMG-LLPLQ 213
+ I G ++G GSSR+ A G KAV+AES+ RI N V G + PL+
Sbjct: 136 VIIGGDNFGCGSSREHAPVCLGAAGAKAVVAESYARIFFRNCVATGEIFPLE 187
>At2g43100.1 68415.m05350 aconitase C-terminal domain-containing
protein contains Pfam profile PF00694: Aconitase
C-terminal domain
Length = 256
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 163 IAIVGKDYGSGSSRDWAAKGPYLLGIKAVIAESFERIHRSNLVGMG-LLPLQ 213
I I G+++G GSSR+ A G KA++AES+ RI N V G + PL+
Sbjct: 139 IIIGGENFGCGSSREHAPVCLGAAGAKAIVAESYARIFFRNSVATGEVFPLE 190
>At2g43090.1 68415.m05348 aconitase C-terminal domain-containing
protein contains Pfam profile PF00694: Aconitase
C-terminal domain
Length = 251
Score = 35.9 bits (79), Expect = 0.031
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 163 IAIVGKDYGSGSSRDWAAKGPYLLGIKAVIAESFERIHRSNLVGMG 208
I I G+++G GSSR+ A G KAV+A+S+ RI N V G
Sbjct: 133 IIIGGENFGCGSSREHAPVCLGAAGAKAVVAQSYARIFFRNSVATG 178
>At4g33945.1 68417.m04817 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 464
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 186 LGIKAVIAESFERIHRSNLVGMGLLPLQFLPGESAATLGLTGAERYDIILPPALAPGQTA 245
+G++ + E+F+ + R N+ +G+ P + L ++ TL L G + + II PG+++
Sbjct: 1 MGVRTISQEAFDDLVRENVEDLGMDPSEALE-DALYTLKLQGVDLFGII---TCVPGESS 56
>At3g59770.1 68416.m06670 sacI homology domain-containing protein / WW
domain-containing protein contains Pfam profiles PF00397:
WW domain, PF02383: SacI homology domain; identical to
cDNA SAC domain protein 9 (SAC9) GI:31415734
Length = 1630
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 135 PKTTHHPSGDVMDIFD 150
P+ TH PS DV+DI+D
Sbjct: 1498 PRVTHSPSSDVVDIWD 1513
>At2g07690.1 68415.m00993 minichromosome maintenance family protein
/ MCM family protein similar to SP|P55862 DNA
replication licensing factor MCM5 (CDC46 homolog)
{Xenopus laevis}; contains Pfam profile PF00493:
MCM2/3/5 family
Length = 727
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 45 FDGMTKELPAATSVRGARCLLLLGDSVTTDHISPAGSIARNSPAARYLAQRGLTA 99
F G K LP +RG +LLLGD +T + + +P A Y + +G +A
Sbjct: 352 FGGSRKSLPDGVKLRGDINVLLLGDP-STAKSQFLKFVEKTAPIAVYTSGKGSSA 405
>At3g11964.1 68416.m01479 S1 RNA-binding domain-containing protein
similar to SP|Q05022 rRNA biogenesis protein RRP5
{Saccharomyces cerevisiae}; contains Pfam profile
PF00575: S1 RNA binding domain
Length = 1838
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 222 TLGLTGAERYDIILPPALAPGQTATVQVDNGTSFQVVVRFDTEVDLTYFKN 272
T L+G +D+++P + + +V ++NG F + F+ VDL + KN
Sbjct: 242 TKDLSGMS-FDLLIPGMMVNARVQSV-LENGILFDFLTYFNGTVDLFHLKN 290
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,814,969
Number of Sequences: 28952
Number of extensions: 289725
Number of successful extensions: 615
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 598
Number of HSP's gapped (non-prelim): 13
length of query: 284
length of database: 12,070,560
effective HSP length: 80
effective length of query: 204
effective length of database: 9,754,400
effective search space: 1989897600
effective search space used: 1989897600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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