Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001726-TA|BGIBMGA001726-PA|IPR000573|Aconitate
hydratase, C-terminal
(284 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|ch... 65 9e-12
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 58 1e-09
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 36 0.005
SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2 |Schizosacc... 33 0.046
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 27 3.1
SPAC1486.06 |||nicotinate phosphoribosyltransferase |Schizosacch... 27 4.0
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 26 5.3
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 5.3
>SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 65.3 bits (152), Expect = 9e-12
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 142 SGDVMDIFDAAERYASEDVPLIAIVGKDYGSGSSRDWAAKGPYLLGIKAVIAESFERIHR 201
+G+ + + A Y + + + +++G GSSR+ AA P LG AVI +SF RIH
Sbjct: 632 TGEYKTVPNVAIDYRDHGIRWVTLGEQNFGEGSSREHAALEPRYLGGAAVITKSFARIHE 691
Query: 202 SNLVGMGLLPLQFLPGESAATLGLTGAERYDIILPPALAPGQTATVQV---DNGTSFQVV 258
+NL GLLPL F + AA ++ + DI APG+ T+ V D +
Sbjct: 692 TNLKKQGLLPLTF--ADPAAYDKISPFDTVDIDGLTTFAPGKPLTLVVHPADGSAEWSTK 749
Query: 259 VRFDTEVD-LTYFKNGGILNYM 279
+ D + +FK G LN+M
Sbjct: 750 LNHTFNKDQIEWFKAGSALNHM 771
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 58.0 bits (134), Expect = 1e-09
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 4/165 (2%)
Query: 122 NIRIVNKMAPAPGPKTTHHPSGDVMDIFDAAERYASEDVPLIAIVGKDYGSGSSRDWAAK 181
N ++ M A G + +G M I + ++ + P + + +YG GS+R+ AA
Sbjct: 621 NNTLIGAMNAATGEVNRAYDNGKGMTIPELMWKWKKDGQPWLVVAEHNYGEGSAREHAAL 680
Query: 182 GPYLLGIKAVIAESFERIHRSNLVGMGLLPLQFL---PGESAATLGLTGAERYDIILPPA 238
P + + ++ +SF RIH +NL G+LPL F+ E + +L
Sbjct: 681 QPRAMNGRIILTKSFARIHETNLKKQGVLPLTFVNEADYEKIDAEDKVSTRGIEQLLEGV 740
Query: 239 LAPGQTATVQVDNGTSFQVVVRFDTEVD-LTYFKNGGILNYMVRK 282
L T V +G+ ++ + D + +FK G LN + K
Sbjct: 741 LDQPITLVVTKKDGSVVEIPCKHTMSKDQIEFFKAGSALNLIREK 785
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 36.3 bits (80), Expect = 0.005
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 163 IAIVGKDYGSGSSRDWAAKGPYLLGIKAVIAESFERIHRSNLVGMGLLPLQ 213
I + G ++G+GSSR+ AA GI V+ SF I + N + LL +Q
Sbjct: 593 ILVSGFNFGTGSSREQAATAILSRGIPLVVGGSFSDIFKRNSINNALLAIQ 643
>SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 33.1 bits (72), Expect = 0.046
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 163 IAIVGKDYGSGSSRDWAAKGPYLLGIKAVIAESFERIHRSNLVGMGLLPL 212
+ + ++G GSSR+ A GI+ +IA SF I +N G+LP+
Sbjct: 606 VLVAHDNFGCGSSREHAPWALNDFGIRVIIAPSFADIFFNNCFKNGMLPI 655
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 27.1 bits (57), Expect = 3.1
Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 14/134 (10%)
Query: 52 LPAATSVRGARCLLLLGDSVTTDHISPAGSIARN-SPAARYLAQRGLTAREFNSYGSRRG 110
L A T +G + + + D I P + A + S + L ++ L E + GS+ G
Sbjct: 416 LYATTPFKGKNRNMTFSNILHKDVIFPEYADAPSISSLCKNLIRKLLVKDENDRLGSQAG 475
Query: 111 NDAVMSRGTFANIR----------IVNKMAPAP---GPKTTHHPSGDVMDIFDAAERYAS 157
V F N++ I+ K+AP P +H +DI + + +
Sbjct: 476 AADVKLHPFFKNVQWALLRHTEPPIIPKLAPIDEKGNPNISHLKESKSLDITHSPQNTQT 535
Query: 158 EDVPLIAIVGKDYG 171
+VPL + G D+G
Sbjct: 536 VEVPLSNLSGADHG 549
>SPAC1486.06 |||nicotinate phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 410
Score = 26.6 bits (56), Expect = 4.0
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 159 DVPLIAIVGKDYGSGSSRDWAAKGPY 184
++PL+A+V + Y +DW+ +G +
Sbjct: 125 EIPLLALVSESYFKFVDKDWSPEGQF 150
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.2 bits (55), Expect = 5.3
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 45 FDGMTKELPAATSVRGARCLLLLGDSVTTDHISPAGSIARNSPAARYLAQRGLTA 99
F G K LP +RG +LLLGD T + R +P A Y + +G +A
Sbjct: 349 FSGSKKILPDGMRLRGDINVLLLGDPGTAKS-QFLKFVERLAPIAVYTSGKGSSA 402
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 57 SVRGARCLLLLGDSVTTDHISPAGSIARNSPAAR 90
+V+ R L DS+ D +SP G+ A NSPA +
Sbjct: 691 AVKELRKLQAKIDSIIADSMSPMGTGAVNSPAIK 724
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,279,378
Number of Sequences: 5004
Number of extensions: 52152
Number of successful extensions: 112
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 103
Number of HSP's gapped (non-prelim): 11
length of query: 284
length of database: 2,362,478
effective HSP length: 72
effective length of query: 212
effective length of database: 2,002,190
effective search space: 424464280
effective search space used: 424464280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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