Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001726-TA|BGIBMGA001726-PA|IPR000573|Aconitate
hydratase, C-terminal
(284 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66567-1|CAA91491.1| 887|Caenorhabditis elegans Hypothetical pr... 388 e-108
L25599-9|AAN63393.1| 683|Caenorhabditis elegans Aconitase prote... 75 8e-14
L25599-8|AAL65788.1| 665|Caenorhabditis elegans Aconitase prote... 75 8e-14
L25599-7|AAA28050.2| 777|Caenorhabditis elegans Aconitase prote... 75 8e-14
Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z73905-2|CAA98109.3| 529|Caenorhabditis elegans Hypothetical pr... 29 3.7
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 28 6.5
AY081844-1|AAL91661.1| 362|Caenorhabditis elegans heparan 6-O s... 28 6.5
AC024755-9|AAF59640.2| 362|Caenorhabditis elegans Heparan sulph... 28 6.5
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z66567-1|CAA91491.1| 887|Caenorhabditis elegans Hypothetical
protein ZK455.1 protein.
Length = 887
Score = 388 bits (955), Expect = e-108
Identities = 176/278 (63%), Positives = 220/278 (79%)
Query: 7 QVYARIEQGSAAWQALDVPRGRLYSWDANSTYIKKPPFFDGMTKELPAATSVRGARCLLL 66
+VYA IE GS WQ L+ P +LY WD STYIKK PFFDGMT ELP+ + + A LL
Sbjct: 609 EVYANIELGSTEWQQLECPAVKLYPWDDASTYIKKVPFFDGMTSELPSQSDIVNAHVLLN 668
Query: 67 LGDSVTTDHISPAGSIARNSPAARYLAQRGLTAREFNSYGSRRGNDAVMSRGTFANIRIV 126
LGDSVTTDHISPAGSI++ SPAAR+LA RG+T R+FN+YG+RRGND +M+RGTFANIR+V
Sbjct: 669 LGDSVTTDHISPAGSISKTSPAARFLAGRGVTPRDFNTYGARRGNDEIMARGTFANIRLV 728
Query: 127 NKMAPAPGPKTTHHPSGDVMDIFDAAERYASEDVPLIAIVGKDYGSGSSRDWAAKGPYLL 186
NK+A GP T H PSG+ +DIFDAA++Y +P I + GK+YG GSSRDWAAKGP+L
Sbjct: 729 NKLASKVGPITLHVPSGEELDIFDAAQKYKDAGIPAIILAGKEYGCGSSRDWAAKGPFLQ 788
Query: 187 GIKAVIAESFERIHRSNLVGMGLLPLQFLPGESAATLGLTGAERYDIILPPALAPGQTAT 246
G+KAVIAESFERIHRSNL+GMG++P Q+ G++A +LGLTG E++ I +P L PGQ
Sbjct: 789 GVKAVIAESFERIHRSNLIGMGIIPFQYQAGQNADSLGLTGKEQFSIGVPDDLKPGQLID 848
Query: 247 VQVDNGTSFQVVVRFDTEVDLTYFKNGGILNYMVRKML 284
V V NG+ FQV+ RFDTEV+LTY++NGGIL YM+RK++
Sbjct: 849 VNVSNGSVFQVICRFDTEVELTYYRNGGILQYMIRKLI 886
>L25599-9|AAN63393.1| 683|Caenorhabditis elegans Aconitase protein
2, isoform c protein.
Length = 683
Score = 74.5 bits (175), Expect = 8e-14
Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 136 KTTHHPSGDVMDIFDAAERYASEDVPLIAIVGKDYGSGSSRDWAAKGPYLLGIKAVIAES 195
K + +G+ + A +Y ++ V +AI ++YG GSSR+ AA P LG +A+I +S
Sbjct: 531 KVKNQVTGEYGAVPATARKYKADGVRWVAIGDENYGEGSSREHAALEPRHLGGRAIIVKS 590
Query: 196 FERIHRSNLVGMGLLPLQFLPGESAATLGLTGAERYDIILPPALAPGQ--TATVQVDNGT 253
F RIH +NL G+LPL F A + ++ I+ + APG+ TA + NG+
Sbjct: 591 FARIHETNLKKQGMLPLTF--ANPADYDKIDPSDNVSIVGLSSFAPGKPLTAIFKKTNGS 648
Query: 254 SFQVVVRFD-TEVDLTYFKNGGILNYM 279
+V + E + +FK G LN M
Sbjct: 649 KVEVTLNHTFNEQQIEWFKAGSALNRM 675
>L25599-8|AAL65788.1| 665|Caenorhabditis elegans Aconitase protein
2, isoform b protein.
Length = 665
Score = 74.5 bits (175), Expect = 8e-14
Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 136 KTTHHPSGDVMDIFDAAERYASEDVPLIAIVGKDYGSGSSRDWAAKGPYLLGIKAVIAES 195
K + +G+ + A +Y ++ V +AI ++YG GSSR+ AA P LG +A+I +S
Sbjct: 513 KVKNQVTGEYGAVPATARKYKADGVRWVAIGDENYGEGSSREHAALEPRHLGGRAIIVKS 572
Query: 196 FERIHRSNLVGMGLLPLQFLPGESAATLGLTGAERYDIILPPALAPGQ--TATVQVDNGT 253
F RIH +NL G+LPL F A + ++ I+ + APG+ TA + NG+
Sbjct: 573 FARIHETNLKKQGMLPLTF--ANPADYDKIDPSDNVSIVGLSSFAPGKPLTAIFKKTNGS 630
Query: 254 SFQVVVRFD-TEVDLTYFKNGGILNYM 279
+V + E + +FK G LN M
Sbjct: 631 KVEVTLNHTFNEQQIEWFKAGSALNRM 657
>L25599-7|AAA28050.2| 777|Caenorhabditis elegans Aconitase protein
2, isoform a protein.
Length = 777
Score = 74.5 bits (175), Expect = 8e-14
Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 136 KTTHHPSGDVMDIFDAAERYASEDVPLIAIVGKDYGSGSSRDWAAKGPYLLGIKAVIAES 195
K + +G+ + A +Y ++ V +AI ++YG GSSR+ AA P LG +A+I +S
Sbjct: 625 KVKNQVTGEYGAVPATARKYKADGVRWVAIGDENYGEGSSREHAALEPRHLGGRAIIVKS 684
Query: 196 FERIHRSNLVGMGLLPLQFLPGESAATLGLTGAERYDIILPPALAPGQ--TATVQVDNGT 253
F RIH +NL G+LPL F A + ++ I+ + APG+ TA + NG+
Sbjct: 685 FARIHETNLKKQGMLPLTF--ANPADYDKIDPSDNVSIVGLSSFAPGKPLTAIFKKTNGS 742
Query: 254 SFQVVVRFD-TEVDLTYFKNGGILNYM 279
+V + E + +FK G LN M
Sbjct: 743 KVEVTLNHTFNEQQIEWFKAGSALNRM 769
>Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical
protein ZK792.5 protein.
Length = 630
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 125 IVNKMAPAPGPKTTHHPSGDVMDIFDAAERYASEDVPLIAIVGKDYGSGSSRDWAAKGPY 184
I+ MAP H SG + + A RY S + ++ + K + + S A KG +
Sbjct: 413 IIETMAPKCSSLLEHQNSGVFLSVIRCAARYPSSEKTMLQQLRKYFRAASE---AKKGQF 469
Query: 185 LLGI 188
LL +
Sbjct: 470 LLNV 473
>Z73905-2|CAA98109.3| 529|Caenorhabditis elegans Hypothetical
protein C32C4.1 protein.
Length = 529
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/67 (23%), Positives = 29/67 (43%)
Query: 196 FERIHRSNLVGMGLLPLQFLPGESAATLGLTGAERYDIILPPALAPGQTATVQVDNGTSF 255
F + +SNL + Q L E A + ER PP + ++ T+ D+G++
Sbjct: 2 FSSVSKSNLNVAKIAKQQRLQAEENAAVQAASMERRVAFRPPPIGESRSTTITHDSGSNA 61
Query: 256 QVVVRFD 262
+R +
Sbjct: 62 DTYMRLN 68
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 28.3 bits (60), Expect = 6.5
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 66 LLGDSVTTDHISPAGSIARNSPAARYLAQRGLTAREF---NSYGSRRGNDAVMSRGTFAN 122
L G S +T +P G + +S AA G TA +GS + A S G F +
Sbjct: 142 LFGSSTSTATTAPTGGLFGSSTAAPSSGLFGSTAAPAAPGGLFGSTSTSTAAPSGGLFGS 201
Query: 123 IRIVNKMAPAP 133
APAP
Sbjct: 202 SAAPTSTAPAP 212
>AY081844-1|AAL91661.1| 362|Caenorhabditis elegans heparan 6-O
sulfotransferase HST-6 protein.
Length = 362
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 100 REFNSYGSRRGNDAVMSRGTFANIRIVNKM 129
R+ + +G + ND V+S A IR VNK+
Sbjct: 306 RKMSVWGKSKSNDTVLSESQLAYIRNVNKL 335
>AC024755-9|AAF59640.2| 362|Caenorhabditis elegans Heparan
sulphotransferase protein 6 protein.
Length = 362
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 100 REFNSYGSRRGNDAVMSRGTFANIRIVNKM 129
R+ + +G + ND V+S A IR VNK+
Sbjct: 306 RKMSVWGKSKSNDTVLSESQLAYIRNVNKL 335
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 27.9 bits (59), Expect = 8.6
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Query: 70 SVTTDHISPAGSIARNSPAARYLAQRGLTAREFNSYGSRRGNDAVMSRGTFANI-RIVNK 128
S TTD ++P G+I + A + A R L +R+ + S + + I+ K
Sbjct: 509 SSTTDEVTPRGAIEEEAAAEKITAPRVLPIVRSAEDIARKEKEIRESEERKSRLAAILAK 568
Query: 129 MAPAPGPKT-THHPSGDVMDIFDAAERYASEDVPLIAIVGKDYGSGSS 175
P T T P+ D DI D+ S +PL+ + S SS
Sbjct: 569 SRGMASPMTNTLPPTAD--DIKDSTPAVTSASLPLLPSSPEPSSSSSS 614
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,917,336
Number of Sequences: 27539
Number of extensions: 289473
Number of successful extensions: 492
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 479
Number of HSP's gapped (non-prelim): 16
length of query: 284
length of database: 12,573,161
effective HSP length: 81
effective length of query: 203
effective length of database: 10,342,502
effective search space: 2099527906
effective search space used: 2099527906
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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