GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001725-TA|BGIBMGA001725-PA|IPR001030|Aconitate
hydratase, N-terminal
         (419 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    31   0.024
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    26   0.69 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    26   0.69 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   6.4  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 30.7 bits (66), Expect = 0.024
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 9/86 (10%)

Query: 248 YKLVGEL----NPLATSTDLVLTITKHLRSLGVVGKFVEFFGPGVGA-LSIADRATVANM 302
           YKL+G +        T+T++V  I   ++S+ V  K V F     GA +SI         
Sbjct: 133 YKLIGRIAAGEGRFNTNTEVV--INTEVKSIPVTKKGVYFAFRDQGACISILAIKVYYIS 190

Query: 303 CPEFGATLAHFPV--DARSLEYLHQT 326
           CPE     AHFP     R +  + QT
Sbjct: 191 CPEISVNFAHFPATPTGREVALIEQT 216


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
          phosphatase protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 0.69
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 19 GSTYTYYDVSALGPKYDRLPFSIRVLL 45
          G  YT   VSAL   YDR   S++++L
Sbjct: 65 GDIYTEESVSALSSFYDRTKMSLQLVL 91


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 0.69
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 19  GSTYTYYDVSALGPKYDRLPFSIRVLL 45
           G  YT   VSAL   YDR   S++++L
Sbjct: 80  GDIYTEESVSALSSFYDRTKMSLQLVL 106


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 354 QDPVFSEVVELDLGDVVTSVSGPK 377
           QD  + E    +LG++ +S  GPK
Sbjct: 402 QDKYYEEYKMYELGELASSFVGPK 425


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.137    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,516
Number of Sequences: 429
Number of extensions: 4750
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 4
length of query: 419
length of database: 140,377
effective HSP length: 59
effective length of query: 360
effective length of database: 115,066
effective search space: 41423760
effective search space used: 41423760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)