GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001724-TA|BGIBMGA001724-PA|undefined
         (468 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118516-1|AAM49885.1| 1322|Drosophila melanogaster LD15342p pro...    34   0.48 
AE014297-3220|AAF56049.2| 1322|Drosophila melanogaster CG31151-P...    34   0.48 
AE014297-3219|AAF56050.3| 1543|Drosophila melanogaster CG31151-P...    34   0.48 
AE014297-3218|ABI31197.1| 1658|Drosophila melanogaster CG31151-P...    34   0.48 
AB190214-1|BAE45705.1| 1658|Drosophila melanogaster winged eye p...    34   0.48 
AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA...    31   4.5  
AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA ...    30   5.9  
BT003778-1|AAO41459.1|  278|Drosophila melanogaster RE04224p pro...    30   7.8  
AE013599-2441|AAF57885.2|  278|Drosophila melanogaster CG10953-P...    30   7.8  

>AY118516-1|AAM49885.1| 1322|Drosophila melanogaster LD15342p
           protein.
          Length = 1322

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 291 PRPQPILVRPGKITLPTPPSIYVRPAS 317
           P+PQP+ + P + TLP PP + + P S
Sbjct: 361 PQPQPVNIMPSEPTLPMPPMLEMEPTS 387


>AE014297-3220|AAF56049.2| 1322|Drosophila melanogaster CG31151-PB,
           isoform B protein.
          Length = 1322

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 291 PRPQPILVRPGKITLPTPPSIYVRPAS 317
           P+PQP+ + P + TLP PP + + P S
Sbjct: 361 PQPQPVNIMPSEPTLPMPPMLEMEPTS 387


>AE014297-3219|AAF56050.3| 1543|Drosophila melanogaster CG31151-PA,
           isoform A protein.
          Length = 1543

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 291 PRPQPILVRPGKITLPTPPSIYVRPAS 317
           P+PQP+ + P + TLP PP + + P S
Sbjct: 582 PQPQPVNIMPSEPTLPMPPMLEMEPTS 608


>AE014297-3218|ABI31197.1| 1658|Drosophila melanogaster CG31151-PC,
           isoform C protein.
          Length = 1658

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 291 PRPQPILVRPGKITLPTPPSIYVRPAS 317
           P+PQP+ + P + TLP PP + + P S
Sbjct: 697 PQPQPVNIMPSEPTLPMPPMLEMEPTS 723


>AB190214-1|BAE45705.1| 1658|Drosophila melanogaster winged eye
           protein.
          Length = 1658

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 291 PRPQPILVRPGKITLPTPPSIYVRPAS 317
           P+PQP+ + P + TLP PP + + P S
Sbjct: 697 PQPQPVNIMPSEPTLPMPPMLEMEPTS 723


>AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA
           protein.
          Length = 537

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 432 NQPLCTNSCSQPICPNSGNQPTCTS 456
           ++PLC N+ + P CPN+    +C S
Sbjct: 206 DKPLCPNTPTTPACPNANGPSSCNS 230


>AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA
           protein.
          Length = 1667

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 410 RVHTIGTPSI-KSVSRNFDFNGY--NQPLCTNSCSQPICPNSGNQP 452
           RVH+ GT S+  S SR  DF G   ++ L +   S+P  PN  N P
Sbjct: 459 RVHSPGTSSVPSSPSRQSDFFGEFESEDLSSGDFSEPTTPNCKNFP 504


>BT003778-1|AAO41459.1|  278|Drosophila melanogaster RE04224p
           protein.
          Length = 278

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 272 VYGQAPAGTFLVKPGQVRFPRPQPILV---RPGKITLPTP-PSIYVRPA 316
           VY  APA  +   P  V  P P P+++    P  + +P P P+  V PA
Sbjct: 33  VYQPAPAPVYQPAPAPVYQPAPAPVVIPAPAPAPVVIPAPAPAPVVIPA 81


>AE013599-2441|AAF57885.2|  278|Drosophila melanogaster CG10953-PA
           protein.
          Length = 278

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 272 VYGQAPAGTFLVKPGQVRFPRPQPILV---RPGKITLPTP-PSIYVRPA 316
           VY  APA  +   P  V  P P P+++    P  + +P P P+  V PA
Sbjct: 33  VYQPAPAPVYQPAPAPVYQPAPAPVVIPAPAPAPVVIPAPAPAPVVIPA 81


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.139    0.443 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,535,682
Number of Sequences: 52641
Number of extensions: 662959
Number of successful extensions: 2084
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2064
Number of HSP's gapped (non-prelim): 21
length of query: 468
length of database: 24,830,863
effective HSP length: 88
effective length of query: 380
effective length of database: 20,198,455
effective search space: 7675412900
effective search space used: 7675412900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)